Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
NPAS3Q8IXF0 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
NPAS3Q8IXF0 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.4□□□□□ -1.55
NPAS3Q8IXF0 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
NPAS3Q8IXF0 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
NPAS3Q8IXF0 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.4□□□□□ -1.55
NPAS3Q8IXF0 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.4□□□□□ -1.55
NPAS3Q8IXF0 CA1-225ENST00000626824 2405 ntTSL 5 BASIC5.39□□□□□ -1.55
NPAS3Q8IXF0 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
NPAS3Q8IXF0 AC100757.1-201ENST00000616872 1835 ntBASIC5.39□□□□□ -1.55
NPAS3Q8IXF0 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.39□□□□□ -1.55
NPAS3Q8IXF0 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
NPAS3Q8IXF0 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
NPAS3Q8IXF0 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.39□□□□□ -1.55
NPAS3Q8IXF0 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
NPAS3Q8IXF0 SNORD73B-201ENST00000364394 72 ntBASIC5.39□□□□□ -1.55
NPAS3Q8IXF0 RNA5SP428-201ENST00000365129 132 ntBASIC5.39□□□□□ -1.55
NPAS3Q8IXF0 Y_RNA.412-201ENST00000384001 104 ntBASIC5.39□□□□□ -1.55
NPAS3Q8IXF0 SNORD63-201ENST00000384262 68 ntBASIC5.39□□□□□ -1.55
NPAS3Q8IXF0 Y_RNA.525-201ENST00000384570 113 ntBASIC5.39□□□□□ -1.55
NPAS3Q8IXF0 MIR513C-201ENST00000401352 84 ntBASIC5.39□□□□□ -1.55
NPAS3Q8IXF0 RNY4P30-201ENST00000410216 95 ntBASIC5.39□□□□□ -1.55
NPAS3Q8IXF0 RNU2-2P-201ENST00000410396 191 ntBASIC5.39□□□□□ -1.55
NPAS3Q8IXF0 Y_RNA.623-201ENST00000411128 95 ntBASIC5.39□□□□□ -1.55
NPAS3Q8IXF0 RPL21P90-201ENST00000415692 466 ntBASIC5.39□□□□□ -1.55
NPAS3Q8IXF0 AL590139.1-201ENST00000416267 400 ntBASIC5.39□□□□□ -1.55
NPAS3Q8IXF0 AC069213.2-201ENST00000420238 366 ntBASIC5.39□□□□□ -1.55
NPAS3Q8IXF0 RPL23AP38-201ENST00000423801 469 ntBASIC5.39□□□□□ -1.55
NPAS3Q8IXF0 AC083899.1-201ENST00000454465 3819 ntBASIC5.39□□□□□ -1.55
NPAS3Q8IXF0 SNORD2.1-201ENST00000458762 69 ntBASIC5.39□□□□□ -1.55
NPAS3Q8IXF0 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC5.39□□□□□ -1.55
NPAS3Q8IXF0 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC5.39□□□□□ -1.55
NPAS3Q8IXF0 HMGB1P21-201ENST00000502313 581 ntBASIC5.39□□□□□ -1.55
NPAS3Q8IXF0 AC140172.1-201ENST00000502928 141 ntBASIC5.39□□□□□ -1.55
NPAS3Q8IXF0 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.39□□□□□ -1.55
NPAS3Q8IXF0 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.39□□□□□ -1.55
NPAS3Q8IXF0 RNA5SP76-201ENST00000516277 87 ntBASIC5.39□□□□□ -1.55
NPAS3Q8IXF0 RNU6-659P-201ENST00000516454 104 ntBASIC5.39□□□□□ -1.55
NPAS3Q8IXF0 Y_RNA.694-201ENST00000516677 117 ntBASIC5.39□□□□□ -1.55
NPAS3Q8IXF0 AP005660.1-201ENST00000522972 293 ntBASIC5.39□□□□□ -1.55
NPAS3Q8IXF0 AC090281.1-201ENST00000523019 276 ntBASIC5.39□□□□□ -1.55
NPAS3Q8IXF0 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC5.39□□□□□ -1.55
NPAS3Q8IXF0 AC115990.1-201ENST00000526957 301 ntBASIC5.39□□□□□ -1.55
NPAS3Q8IXF0 AL590705.4-201ENST00000532209 134 ntBASIC5.39□□□□□ -1.55
NPAS3Q8IXF0 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC5.39□□□□□ -1.55
NPAS3Q8IXF0 RN7SL52P-201ENST00000584271 284 ntBASIC5.39□□□□□ -1.55
NPAS3Q8IXF0 RNU2-4P-201ENST00000606190 192 ntBASIC5.39□□□□□ -1.55
NPAS3Q8IXF0 U2.15-201ENST00000611544 191 ntBASIC5.39□□□□□ -1.55
NPAS3Q8IXF0 U2.16-201ENST00000613119 191 ntBASIC5.39□□□□□ -1.55
NPAS3Q8IXF0 U2.12-201ENST00000613778 191 ntBASIC5.39□□□□□ -1.55
NPAS3Q8IXF0 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.39□□□□□ -1.55
NPAS3Q8IXF0 U2.9-201ENST00000615427 191 ntBASIC5.39□□□□□ -1.55
NPAS3Q8IXF0 U2.11-201ENST00000616345 191 ntBASIC5.39□□□□□ -1.55
NPAS3Q8IXF0 U2.2-201ENST00000616535 191 ntBASIC5.39□□□□□ -1.55
NPAS3Q8IXF0 RNA5SP439-201ENST00000617595 124 ntBASIC5.39□□□□□ -1.55
NPAS3Q8IXF0 RN7SL722P-201ENST00000617780 284 ntBASIC5.39□□□□□ -1.55
NPAS3Q8IXF0 U2.3-201ENST00000617785 191 ntBASIC5.39□□□□□ -1.55
NPAS3Q8IXF0 RN7SL565P-201ENST00000618246 284 ntBASIC5.39□□□□□ -1.55
NPAS3Q8IXF0 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC5.39□□□□□ -1.55
NPAS3Q8IXF0 U2.19-201ENST00000618602 191 ntBASIC5.39□□□□□ -1.55
NPAS3Q8IXF0 RNU2-1-201ENST00000618664 191 ntBASIC5.39□□□□□ -1.55
NPAS3Q8IXF0 U2.6-201ENST00000619225 191 ntBASIC5.39□□□□□ -1.55
NPAS3Q8IXF0 U2.5-201ENST00000619465 191 ntBASIC5.39□□□□□ -1.55
NPAS3Q8IXF0 U2.10-201ENST00000620268 191 ntBASIC5.39□□□□□ -1.55
NPAS3Q8IXF0 uc_338.7-201ENST00000621834 124 ntBASIC5.39□□□□□ -1.55
NPAS3Q8IXF0 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
NPAS3Q8IXF0 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
NPAS3Q8IXF0 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.39□□□□□ -1.55
NPAS3Q8IXF0 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.39□□□□□ -1.55
NPAS3Q8IXF0 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
NPAS3Q8IXF0 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.39□□□□□ -1.55
NPAS3Q8IXF0 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
NPAS3Q8IXF0 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
NPAS3Q8IXF0 AC016745.2-201ENST00000608834 3443 ntBASIC5.39□□□□□ -1.55
NPAS3Q8IXF0 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
NPAS3Q8IXF0 AL137058.3-201ENST00000624531 3099 ntBASIC5.39□□□□□ -1.55
NPAS3Q8IXF0 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.39□□□□□ -1.55
NPAS3Q8IXF0 AC130650.2-201ENST00000618736 2403 ntBASIC5.38□□□□□ -1.55
NPAS3Q8IXF0 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
NPAS3Q8IXF0 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
NPAS3Q8IXF0 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
NPAS3Q8IXF0 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
NPAS3Q8IXF0 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.38□□□□□ -1.55
NPAS3Q8IXF0 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.38□□□□□ -1.55
NPAS3Q8IXF0 RN7SKP145-201ENST00000363291 303 ntBASIC5.38□□□□□ -1.55
NPAS3Q8IXF0 RNU6-1284P-201ENST00000363701 100 ntBASIC5.38□□□□□ -1.55
NPAS3Q8IXF0 RNU6-312P-201ENST00000364629 107 ntBASIC5.38□□□□□ -1.55
NPAS3Q8IXF0 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC5.38□□□□□ -1.55
NPAS3Q8IXF0 AC004938.1-201ENST00000438468 308 ntBASIC5.38□□□□□ -1.55
NPAS3Q8IXF0 UQCRBP2-201ENST00000447827 297 ntBASIC5.38□□□□□ -1.55
NPAS3Q8IXF0 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC5.38□□□□□ -1.55
NPAS3Q8IXF0 RPL31P60-201ENST00000478450 367 ntBASIC5.38□□□□□ -1.55
NPAS3Q8IXF0 AC098583.1-201ENST00000480875 255 ntBASIC5.38□□□□□ -1.55
NPAS3Q8IXF0 AC008897.1-201ENST00000494006 347 ntBASIC5.38□□□□□ -1.55
NPAS3Q8IXF0 COX6B1P5-201ENST00000509843 249 ntBASIC5.38□□□□□ -1.55
NPAS3Q8IXF0 AC025755.1-201ENST00000521306 278 ntBASIC5.38□□□□□ -1.55
NPAS3Q8IXF0 DEFB131C-201ENST00000528817 165 ntBASIC5.38□□□□□ -1.55
NPAS3Q8IXF0 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC5.38□□□□□ -1.55
NPAS3Q8IXF0 MIR4737-201ENST00000583979 81 ntBASIC5.38□□□□□ -1.55
NPAS3Q8IXF0 AC067852.4-201ENST00000590314 478 ntBASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms