Protein–RNA interactions for Protein: Q6UVK1

CSPG4, Chondroitin sulfate proteoglycan 4, humanhuman

Predictions only

Length 2,322 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4Q6UVK1 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
CSPG4Q6UVK1 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.04□□□□□ -2.24
CSPG4Q6UVK1 OFD1P12Y-201ENST00000427963 1207 ntBASIC1.04□□□□□ -2.24
CSPG4Q6UVK1 ELOCP6-201ENST00000429066 328 ntBASIC1.04□□□□□ -2.24
CSPG4Q6UVK1 RPL31P35-201ENST00000431058 377 ntBASIC1.04□□□□□ -2.24
CSPG4Q6UVK1 RPL35AP22-201ENST00000436855 335 ntBASIC1.04□□□□□ -2.24
CSPG4Q6UVK1 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC1.04□□□□□ -2.24
CSPG4Q6UVK1 ELOCP12-201ENST00000458706 328 ntBASIC1.04□□□□□ -2.24
CSPG4Q6UVK1 RNU6-1132P-201ENST00000459214 107 ntBASIC1.04□□□□□ -2.24
CSPG4Q6UVK1 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC1.04□□□□□ -2.24
CSPG4Q6UVK1 HMGB3P3-201ENST00000510526 400 ntBASIC1.04□□□□□ -2.24
CSPG4Q6UVK1 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC1.04□□□□□ -2.24
CSPG4Q6UVK1 OR5AQ1P-201ENST00000527596 927 ntBASIC1.04□□□□□ -2.24
CSPG4Q6UVK1 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.04□□□□□ -2.24
CSPG4Q6UVK1 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC1.04□□□□□ -2.24
CSPG4Q6UVK1 AC112503.2-201ENST00000609005 552 ntBASIC1.04□□□□□ -2.24
CSPG4Q6UVK1 SGO1P2-201ENST00000429458 1589 ntBASIC1.03□□□□□ -2.24
CSPG4Q6UVK1 AC090740.1-201ENST00000623193 2262 ntBASIC1.03□□□□□ -2.24
CSPG4Q6UVK1 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC1.03□□□□□ -2.24
CSPG4Q6UVK1 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.03□□□□□ -2.24
CSPG4Q6UVK1 Y_RNA.258-201ENST00000364613 105 ntBASIC1.03□□□□□ -2.24
CSPG4Q6UVK1 RPL26P37-201ENST00000411983 438 ntBASIC1.03□□□□□ -2.24
CSPG4Q6UVK1 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.03□□□□□ -2.24
CSPG4Q6UVK1 IFNA20P-201ENST00000436840 528 ntBASIC1.03□□□□□ -2.24
CSPG4Q6UVK1 AL121871.1-201ENST00000443413 436 ntBASIC1.03□□□□□ -2.24
CSPG4Q6UVK1 RN7SKP265-201ENST00000516448 223 ntBASIC1.03□□□□□ -2.24
CSPG4Q6UVK1 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC1.03□□□□□ -2.24
CSPG4Q6UVK1 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC1.03□□□□□ -2.24
CSPG4Q6UVK1 AC024619.4-201ENST00000580924 316 ntBASIC1.03□□□□□ -2.24
CSPG4Q6UVK1 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC1.03□□□□□ -2.24
CSPG4Q6UVK1 AL020996.3-201ENST00000606617 222 ntBASIC1.03□□□□□ -2.24
CSPG4Q6UVK1 RNU6-1180P-201ENST00000364935 107 ntBASIC1.03□□□□□ -2.25
CSPG4Q6UVK1 CBX3P6-201ENST00000430257 527 ntBASIC1.03□□□□□ -2.25
CSPG4Q6UVK1 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC1.03□□□□□ -2.25
CSPG4Q6UVK1 Z96811.1-201ENST00000445880 108 ntBASIC1.03□□□□□ -2.25
CSPG4Q6UVK1 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC1.03□□□□□ -2.25
CSPG4Q6UVK1 RPL21P104-201ENST00000464143 478 ntBASIC1.03□□□□□ -2.25
CSPG4Q6UVK1 AC096571.1-202ENST00000506634 735 ntBASIC1.03□□□□□ -2.25
CSPG4Q6UVK1 AC022447.3-201ENST00000506865 495 ntBASIC1.03□□□□□ -2.25
CSPG4Q6UVK1 CDC42P4-201ENST00000510507 563 ntBASIC1.03□□□□□ -2.25
CSPG4Q6UVK1 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC1.03□□□□□ -2.25
CSPG4Q6UVK1 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.03□□□□□ -2.25
CSPG4Q6UVK1 SNORD84-203ENST00000584275 78 ntBASIC1.03□□□□□ -2.25
CSPG4Q6UVK1 MIR4295-201ENST00000585286 85 ntBASIC1.03□□□□□ -2.25
CSPG4Q6UVK1 LLPHP1-201ENST00000603571 367 ntBASIC1.03□□□□□ -2.25
CSPG4Q6UVK1 AL449363.1-201ENST00000617815 186 ntBASIC1.03□□□□□ -2.25
CSPG4Q6UVK1 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC1.03□□□□□ -2.25
CSPG4Q6UVK1 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
CSPG4Q6UVK1 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.02□□□□□ -2.25
CSPG4Q6UVK1 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
CSPG4Q6UVK1 Z85995.1-201ENST00000415547 335 ntBASIC1.02□□□□□ -2.25
CSPG4Q6UVK1 SUMO1P4-201ENST00000429430 302 ntBASIC1.02□□□□□ -2.25
CSPG4Q6UVK1 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.02□□□□□ -2.25
CSPG4Q6UVK1 NEFMP1-201ENST00000443423 1006 ntBASIC1.02□□□□□ -2.25
CSPG4Q6UVK1 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC1.02□□□□□ -2.25
CSPG4Q6UVK1 RNU6-711P-201ENST00000517255 106 ntBASIC1.02□□□□□ -2.25
CSPG4Q6UVK1 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC1.02□□□□□ -2.25
CSPG4Q6UVK1 SYF2P1-201ENST00000550658 413 ntBASIC1.02□□□□□ -2.25
CSPG4Q6UVK1 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
CSPG4Q6UVK1 AC104229.1-201ENST00000561364 255 ntBASIC1.02□□□□□ -2.25
CSPG4Q6UVK1 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC1.02□□□□□ -2.25
CSPG4Q6UVK1 AC073055.1-201ENST00000456901 1621 ntBASIC1.02□□□□□ -2.25
CSPG4Q6UVK1 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
CSPG4Q6UVK1 AL512504.1-201ENST00000415494 778 ntBASIC1.01□□□□□ -2.25
CSPG4Q6UVK1 RAB9AP5-201ENST00000437794 597 ntBASIC1.01□□□□□ -2.25
CSPG4Q6UVK1 RAB9AP2-201ENST00000443911 597 ntBASIC1.01□□□□□ -2.25
CSPG4Q6UVK1 AC010683.1-201ENST00000473673 378 ntBASIC1.01□□□□□ -2.25
CSPG4Q6UVK1 AC092989.1-201ENST00000481235 277 ntBASIC1.01□□□□□ -2.25
CSPG4Q6UVK1 AC125611.2-201ENST00000551907 647 ntBASIC1.01□□□□□ -2.25
CSPG4Q6UVK1 ANP32BP3-201ENST00000559213 706 ntBASIC1.01□□□□□ -2.25
CSPG4Q6UVK1 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC1.01□□□□□ -2.25
CSPG4Q6UVK1 GLUD1P4-201ENST00000590914 418 ntBASIC1.01□□□□□ -2.25
CSPG4Q6UVK1 AC090525.3-201ENST00000605601 189 ntBASIC1.01□□□□□ -2.25
CSPG4Q6UVK1 AC022079.2-201ENST00000619739 566 ntBASIC1.01□□□□□ -2.25
CSPG4Q6UVK1 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC1.01□□□□□ -2.25
CSPG4Q6UVK1 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC1.01□□□□□ -2.25
CSPG4Q6UVK1 LSM1P1-201ENST00000438629 273 ntBASIC1.01□□□□□ -2.25
CSPG4Q6UVK1 PGBD4P3-201ENST00000440731 581 ntBASIC1.01□□□□□ -2.25
CSPG4Q6UVK1 SNRPGP13-201ENST00000442212 177 ntBASIC1.01□□□□□ -2.25
CSPG4Q6UVK1 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC1.01□□□□□ -2.25
CSPG4Q6UVK1 AC069277.2-201ENST00000454211 432 ntBASIC1.01□□□□□ -2.25
CSPG4Q6UVK1 RPL37P6-202ENST00000464216 403 ntBASIC1.01□□□□□ -2.25
CSPG4Q6UVK1 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.01□□□□□ -2.25
CSPG4Q6UVK1 AL121839.1-201ENST00000556233 1185 ntBASIC1.01□□□□□ -2.25
CSPG4Q6UVK1 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC1.01□□□□□ -2.25
CSPG4Q6UVK1 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC1.01□□□□□ -2.25
CSPG4Q6UVK1 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
CSPG4Q6UVK1 MIR924-201ENST00000638017 53 ntBASIC1.01□□□□□ -2.25
CSPG4Q6UVK1 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.01□□□□□ -2.25
CSPG4Q6UVK1 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
CSPG4Q6UVK1 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC1□□□□□ -2.25
CSPG4Q6UVK1 CD24P4-201ENST00000382840 243 ntBASIC1□□□□□ -2.25
CSPG4Q6UVK1 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1□□□□□ -2.25
CSPG4Q6UVK1 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC1□□□□□ -2.25
CSPG4Q6UVK1 RPL23AP41-201ENST00000484754 458 ntBASIC1□□□□□ -2.25
CSPG4Q6UVK1 OR9N1P-202ENST00000494289 481 ntBASIC1□□□□□ -2.25
CSPG4Q6UVK1 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC1□□□□□ -2.25
CSPG4Q6UVK1 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC1□□□□□ -2.25
CSPG4Q6UVK1 MIR514B-201ENST00000516774 80 ntBASIC1□□□□□ -2.25
CSPG4Q6UVK1 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms