Protein–RNA interactions for Protein: Q6TFL3

CCDC171, Coiled-coil domain-containing protein 171, humanhuman

Predictions only

Length 1,326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171Q6TFL3 RPS3AP9-201ENST00000417027 792 ntBASIC1.87□□□□□ -2.11
CCDC171Q6TFL3 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC1.87□□□□□ -2.11
CCDC171Q6TFL3 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC1.87□□□□□ -2.11
CCDC171Q6TFL3 TRGVB-201ENST00000453257 471 ntBASIC1.87□□□□□ -2.11
CCDC171Q6TFL3 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC1.87□□□□□ -2.11
CCDC171Q6TFL3 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC1.87□□□□□ -2.11
CCDC171Q6TFL3 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
CCDC171Q6TFL3 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC1.87□□□□□ -2.11
CCDC171Q6TFL3 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.87□□□□□ -2.11
CCDC171Q6TFL3 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.87□□□□□ -2.11
CCDC171Q6TFL3 SETP7-201ENST00000552169 453 ntBASIC1.87□□□□□ -2.11
CCDC171Q6TFL3 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC1.87□□□□□ -2.11
CCDC171Q6TFL3 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC1.87□□□□□ -2.11
CCDC171Q6TFL3 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
CCDC171Q6TFL3 MIR4504-201ENST00000577413 92 ntBASIC1.87□□□□□ -2.11
CCDC171Q6TFL3 AC135803.1-201ENST00000608748 565 ntBASIC1.87□□□□□ -2.11
CCDC171Q6TFL3 AC020658.4-201ENST00000613987 684 ntBASIC1.87□□□□□ -2.11
CCDC171Q6TFL3 AL590410.1-201ENST00000617925 333 ntBASIC1.87□□□□□ -2.11
CCDC171Q6TFL3 AC109809.1-201ENST00000619665 545 ntBASIC1.87□□□□□ -2.11
CCDC171Q6TFL3 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC1.87□□□□□ -2.11
CCDC171Q6TFL3 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
CCDC171Q6TFL3 RNU6-339P-201ENST00000384310 107 ntBASIC1.86□□□□□ -2.11
CCDC171Q6TFL3 RPL7P27-201ENST00000403775 720 ntBASIC1.86□□□□□ -2.11
CCDC171Q6TFL3 AL021407.1-201ENST00000404531 386 ntBASIC1.86□□□□□ -2.11
CCDC171Q6TFL3 RNA5SP270-201ENST00000411361 118 ntBASIC1.86□□□□□ -2.11
CCDC171Q6TFL3 AC009237.2-201ENST00000421358 284 ntBASIC1.86□□□□□ -2.11
CCDC171Q6TFL3 MTCYBP17-201ENST00000503579 789 ntBASIC1.86□□□□□ -2.11
CCDC171Q6TFL3 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC1.86□□□□□ -2.11
CCDC171Q6TFL3 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC1.86□□□□□ -2.11
CCDC171Q6TFL3 MIR4498-201ENST00000577599 66 ntBASIC1.86□□□□□ -2.11
CCDC171Q6TFL3 MIR4303-201ENST00000581299 66 ntBASIC1.86□□□□□ -2.11
CCDC171Q6TFL3 snoU13.31-201ENST00000607291 104 ntBASIC1.86□□□□□ -2.11
CCDC171Q6TFL3 uc_338.5-201ENST00000611839 155 ntBASIC1.86□□□□□ -2.11
CCDC171Q6TFL3 AC005296.1-201ENST00000616145 209 ntBASIC1.86□□□□□ -2.11
CCDC171Q6TFL3 BX649567.1-201ENST00000642071 1134 ntBASIC1.86□□□□□ -2.11
CCDC171Q6TFL3 ADAM3A-203ENST00000461344 2157 ntBASIC1.86□□□□□ -2.11
CCDC171Q6TFL3 AL513185.3-201ENST00000433335 1300 ntBASIC1.85□□□□□ -2.11
CCDC171Q6TFL3 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC1.85□□□□□ -2.11
CCDC171Q6TFL3 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
CCDC171Q6TFL3 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC1.85□□□□□ -2.11
CCDC171Q6TFL3 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
CCDC171Q6TFL3 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC1.85□□□□□ -2.11
CCDC171Q6TFL3 HMGB1P27-201ENST00000431429 603 ntBASIC1.85□□□□□ -2.11
CCDC171Q6TFL3 OR10R1P-201ENST00000441524 1141 ntBASIC1.85□□□□□ -2.11
CCDC171Q6TFL3 RGS5-217ENST00000451759 835 ntTSL 3 BASIC1.85□□□□□ -2.11
CCDC171Q6TFL3 UBE2Q2P9-201ENST00000490086 202 ntBASIC1.85□□□□□ -2.11
CCDC171Q6TFL3 AC104685.1-201ENST00000502445 371 ntBASIC1.85□□□□□ -2.11
CCDC171Q6TFL3 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC1.85□□□□□ -2.11
CCDC171Q6TFL3 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
CCDC171Q6TFL3 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC1.85□□□□□ -2.11
CCDC171Q6TFL3 AC117532.1-201ENST00000514638 323 ntBASIC1.85□□□□□ -2.11
CCDC171Q6TFL3 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC1.85□□□□□ -2.11
CCDC171Q6TFL3 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC1.85□□□□□ -2.11
CCDC171Q6TFL3 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC1.85□□□□□ -2.11
CCDC171Q6TFL3 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC1.85□□□□□ -2.11
CCDC171Q6TFL3 AC044913.1-201ENST00000557200 430 ntBASIC1.85□□□□□ -2.11
CCDC171Q6TFL3 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC1.85□□□□□ -2.11
CCDC171Q6TFL3 MIR4287-201ENST00000579398 78 ntBASIC1.85□□□□□ -2.11
CCDC171Q6TFL3 AL355297.2-201ENST00000604792 129 ntBASIC1.85□□□□□ -2.11
CCDC171Q6TFL3 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC1.85□□□□□ -2.11
CCDC171Q6TFL3 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.85□□□□□ -2.11
CCDC171Q6TFL3 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC1.84□□□□□ -2.11
CCDC171Q6TFL3 RNU6-198P-201ENST00000384258 104 ntBASIC1.84□□□□□ -2.12
CCDC171Q6TFL3 MIR320A-201ENST00000385302 82 ntBASIC1.84□□□□□ -2.12
CCDC171Q6TFL3 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC1.84□□□□□ -2.12
CCDC171Q6TFL3 U8.14-201ENST00000390843 143 ntBASIC1.84□□□□□ -2.12
CCDC171Q6TFL3 Z85995.1-201ENST00000415547 335 ntBASIC1.84□□□□□ -2.12
CCDC171Q6TFL3 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC1.84□□□□□ -2.12
CCDC171Q6TFL3 XKRYP1-201ENST00000423438 492 ntBASIC1.84□□□□□ -2.12
CCDC171Q6TFL3 XKRYP2-201ENST00000432915 492 ntBASIC1.84□□□□□ -2.12
CCDC171Q6TFL3 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC1.84□□□□□ -2.12
CCDC171Q6TFL3 SNORD121B-201ENST00000458838 81 ntBASIC1.84□□□□□ -2.12
CCDC171Q6TFL3 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC1.84□□□□□ -2.12
CCDC171Q6TFL3 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
CCDC171Q6TFL3 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC1.84□□□□□ -2.12
CCDC171Q6TFL3 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC1.84□□□□□ -2.12
CCDC171Q6TFL3 AP004607.1-201ENST00000524456 203 ntBASIC1.84□□□□□ -2.12
CCDC171Q6TFL3 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC1.84□□□□□ -2.12
CCDC171Q6TFL3 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.84□□□□□ -2.12
CCDC171Q6TFL3 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC1.84□□□□□ -2.12
CCDC171Q6TFL3 SNRPEP2-201ENST00000397592 279 ntBASIC1.83□□□□□ -2.12
CCDC171Q6TFL3 FGF7P8-201ENST00000402994 292 ntBASIC1.83□□□□□ -2.12
CCDC171Q6TFL3 MOB4-205ENST00000409916 829 ntTSL 3 BASIC1.83□□□□□ -2.12
CCDC171Q6TFL3 RNU4-62P-201ENST00000410125 130 ntBASIC1.83□□□□□ -2.12
CCDC171Q6TFL3 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC1.83□□□□□ -2.12
CCDC171Q6TFL3 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC1.83□□□□□ -2.12
CCDC171Q6TFL3 AL358075.3-201ENST00000426289 226 ntBASIC1.83□□□□□ -2.12
CCDC171Q6TFL3 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC1.83□□□□□ -2.12
CCDC171Q6TFL3 Y_RNA.676-201ENST00000516393 96 ntBASIC1.83□□□□□ -2.12
CCDC171Q6TFL3 SNORD116-30-201ENST00000516468 85 ntBASIC1.83□□□□□ -2.12
CCDC171Q6TFL3 PTK2-220ENST00000520151 573 ntTSL 4 BASIC1.83□□□□□ -2.12
CCDC171Q6TFL3 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.83□□□□□ -2.12
CCDC171Q6TFL3 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC1.83□□□□□ -2.12
CCDC171Q6TFL3 SNORD53B-201ENST00000577887 78 ntBASIC1.83□□□□□ -2.12
CCDC171Q6TFL3 AP005137.2-201ENST00000609238 400 ntBASIC1.83□□□□□ -2.12
CCDC171Q6TFL3 AC025594.3-201ENST00000613068 790 ntBASIC1.83□□□□□ -2.12
CCDC171Q6TFL3 AC079395.3-201ENST00000615161 484 ntBASIC1.83□□□□□ -2.12
CCDC171Q6TFL3 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
CCDC171Q6TFL3 IL33-202ENST00000417746 2327 ntTSL 2 BASIC1.83□□□□□ -2.12
CCDC171Q6TFL3 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms