Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC0.78□□□□□ -2.28
VPS13DQ5THJ4 CYCSP48-201ENST00000417124 323 ntBASIC0.78□□□□□ -2.28
VPS13DQ5THJ4 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC0.78□□□□□ -2.28
VPS13DQ5THJ4 FTH1P12-201ENST00000432137 551 ntBASIC0.78□□□□□ -2.28
VPS13DQ5THJ4 CDC42P4-201ENST00000510507 563 ntBASIC0.78□□□□□ -2.28
VPS13DQ5THJ4 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC0.78□□□□□ -2.28
VPS13DQ5THJ4 VN1R107P-201ENST00000601784 209 ntBASIC0.78□□□□□ -2.28
VPS13DQ5THJ4 uc_338.12-201ENST00000616344 181 ntBASIC0.78□□□□□ -2.28
VPS13DQ5THJ4 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC0.78□□□□□ -2.28
VPS13DQ5THJ4 Y_RNA.258-201ENST00000364613 105 ntBASIC0.78□□□□□ -2.29
VPS13DQ5THJ4 SNORA18.2-201ENST00000383865 132 ntBASIC0.78□□□□□ -2.29
VPS13DQ5THJ4 MOB4-205ENST00000409916 829 ntTSL 3 BASIC0.78□□□□□ -2.29
VPS13DQ5THJ4 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC0.78□□□□□ -2.29
VPS13DQ5THJ4 AL590233.1-201ENST00000430017 456 ntBASIC0.78□□□□□ -2.29
VPS13DQ5THJ4 RPS23P3-201ENST00000470993 430 ntBASIC0.78□□□□□ -2.29
VPS13DQ5THJ4 RPS27AP10-201ENST00000496103 208 ntBASIC0.78□□□□□ -2.29
VPS13DQ5THJ4 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC0.78□□□□□ -2.29
VPS13DQ5THJ4 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC0.78□□□□□ -2.29
VPS13DQ5THJ4 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC0.78□□□□□ -2.29
VPS13DQ5THJ4 SNORD84-203ENST00000584275 78 ntBASIC0.78□□□□□ -2.29
VPS13DQ5THJ4 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC0.77□□□□□ -2.29
VPS13DQ5THJ4 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.77□□□□□ -2.29
VPS13DQ5THJ4 RNU6-234P-201ENST00000365229 104 ntBASIC0.77□□□□□ -2.29
VPS13DQ5THJ4 AC244636.1-201ENST00000421152 228 ntBASIC0.77□□□□□ -2.29
VPS13DQ5THJ4 AC139103.1-201ENST00000534696 1030 ntBASIC0.77□□□□□ -2.29
VPS13DQ5THJ4 AP002907.1-201ENST00000606361 1430 ntBASIC0.77□□□□□ -2.29
VPS13DQ5THJ4 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
VPS13DQ5THJ4 AC074117.2-201ENST00000417130 397 ntBASIC0.77□□□□□ -2.29
VPS13DQ5THJ4 RFC5P1-201ENST00000454419 874 ntBASIC0.77□□□□□ -2.29
VPS13DQ5THJ4 AF279873.1-201ENST00000523393 313 ntBASIC0.77□□□□□ -2.29
VPS13DQ5THJ4 AC118942.1-201ENST00000529674 1035 ntBASIC0.77□□□□□ -2.29
VPS13DQ5THJ4 AL390240.1-201ENST00000612950 384 ntBASIC0.77□□□□□ -2.29
VPS13DQ5THJ4 AC083806.3-201ENST00000614016 455 ntBASIC0.77□□□□□ -2.29
VPS13DQ5THJ4 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC0.77□□□□□ -2.29
VPS13DQ5THJ4 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
VPS13DQ5THJ4 Y_RNA.115-201ENST00000363272 98 ntBASIC0.77□□□□□ -2.29
VPS13DQ5THJ4 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC0.77□□□□□ -2.29
VPS13DQ5THJ4 AP000949.1-201ENST00000438328 629 ntBASIC0.77□□□□□ -2.29
VPS13DQ5THJ4 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC0.77□□□□□ -2.29
VPS13DQ5THJ4 AC098583.1-201ENST00000480875 255 ntBASIC0.77□□□□□ -2.29
VPS13DQ5THJ4 AC090970.3-201ENST00000612566 866 ntBASIC0.77□□□□□ -2.29
VPS13DQ5THJ4 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC0.77□□□□□ -2.29
VPS13DQ5THJ4 AK6-205ENST00000618980 483 ntTSL 2 BASIC0.77□□□□□ -2.29
VPS13DQ5THJ4 AP003122.6-201ENST00000623831 495 ntBASIC0.77□□□□□ -2.29
VPS13DQ5THJ4 AC022513.1-201ENST00000624512 117 ntBASIC0.77□□□□□ -2.29
VPS13DQ5THJ4 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
VPS13DQ5THJ4 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
VPS13DQ5THJ4 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.76□□□□□ -2.29
VPS13DQ5THJ4 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
VPS13DQ5THJ4 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
VPS13DQ5THJ4 AC011712.1-201ENST00000588959 234 ntBASIC0.76□□□□□ -2.29
VPS13DQ5THJ4 GLUD1P4-201ENST00000590914 418 ntBASIC0.76□□□□□ -2.29
VPS13DQ5THJ4 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.76□□□□□ -2.29
VPS13DQ5THJ4 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC0.76□□□□□ -2.29
VPS13DQ5THJ4 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC0.76□□□□□ -2.29
VPS13DQ5THJ4 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC0.76□□□□□ -2.29
VPS13DQ5THJ4 SMARCE1P4-201ENST00000523647 241 ntBASIC0.76□□□□□ -2.29
VPS13DQ5THJ4 CYCSP26-201ENST00000534107 320 ntBASIC0.76□□□□□ -2.29
VPS13DQ5THJ4 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC0.76□□□□□ -2.29
VPS13DQ5THJ4 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
VPS13DQ5THJ4 AL161734.1-201ENST00000609720 557 ntBASIC0.76□□□□□ -2.29
VPS13DQ5THJ4 AC098657.3-201ENST00000620434 263 ntBASIC0.76□□□□□ -2.29
VPS13DQ5THJ4 OR51A5P-201ENST00000415429 942 ntBASIC0.76□□□□□ -2.29
VPS13DQ5THJ4 HSPE1P24-201ENST00000450782 238 ntBASIC0.76□□□□□ -2.29
VPS13DQ5THJ4 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC0.76□□□□□ -2.29
VPS13DQ5THJ4 AC013553.2-201ENST00000604244 589 ntBASIC0.76□□□□□ -2.29
VPS13DQ5THJ4 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.76□□□□□ -2.29
VPS13DQ5THJ4 RNU6-799P-201ENST00000363567 107 ntBASIC0.75□□□□□ -2.29
VPS13DQ5THJ4 MIR144-201ENST00000384886 86 ntBASIC0.75□□□□□ -2.29
VPS13DQ5THJ4 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC0.75□□□□□ -2.29
VPS13DQ5THJ4 RPS29P23-201ENST00000458635 123 ntBASIC0.75□□□□□ -2.29
VPS13DQ5THJ4 DUXAP5-201ENST00000529668 529 ntBASIC0.75□□□□□ -2.29
VPS13DQ5THJ4 AC090897.2-201ENST00000581715 130 ntBASIC0.75□□□□□ -2.29
VPS13DQ5THJ4 MKKS-204ENST00000639674 192 ntBASIC0.75□□□□□ -2.29
VPS13DQ5THJ4 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
VPS13DQ5THJ4 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
VPS13DQ5THJ4 RNA5SP257-201ENST00000363023 116 ntBASIC0.75□□□□□ -2.29
VPS13DQ5THJ4 AC105252.1-201ENST00000503089 286 ntBASIC0.75□□□□□ -2.29
VPS13DQ5THJ4 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC0.75□□□□□ -2.29
VPS13DQ5THJ4 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC0.75□□□□□ -2.29
VPS13DQ5THJ4 IGHVIII-38-1-201ENST00000521454 282 ntBASIC0.75□□□□□ -2.29
VPS13DQ5THJ4 SUB1P1-201ENST00000524415 382 ntBASIC0.75□□□□□ -2.29
VPS13DQ5THJ4 DEFB108E-201ENST00000524692 240 ntBASIC0.75□□□□□ -2.29
VPS13DQ5THJ4 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC0.75□□□□□ -2.29
VPS13DQ5THJ4 AC090525.3-201ENST00000605601 189 ntBASIC0.75□□□□□ -2.29
VPS13DQ5THJ4 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC0.75□□□□□ -2.29
VPS13DQ5THJ4 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC0.75□□□□□ -2.29
VPS13DQ5THJ4 AC018630.2-201ENST00000534866 2403 ntBASIC0.75□□□□□ -2.29
VPS13DQ5THJ4 DEFB108F-201ENST00000344638 222 ntBASIC0.75□□□□□ -2.29
VPS13DQ5THJ4 AC092451.2-201ENST00000538746 658 ntBASIC0.75□□□□□ -2.29
VPS13DQ5THJ4 MIR4295-201ENST00000585286 85 ntBASIC0.75□□□□□ -2.29
VPS13DQ5THJ4 AL512605.2-201ENST00000592972 256 ntBASIC0.75□□□□□ -2.29
VPS13DQ5THJ4 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC0.75□□□□□ -2.29
VPS13DQ5THJ4 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC0.75□□□□□ -2.29
VPS13DQ5THJ4 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC0.75□□□□□ -2.29
VPS13DQ5THJ4 UBBP3-201ENST00000445497 241 ntBASIC0.75□□□□□ -2.29
VPS13DQ5THJ4 AC023790.1-201ENST00000482174 347 ntBASIC0.75□□□□□ -2.29
VPS13DQ5THJ4 RNU1-92P-201ENST00000517017 135 ntBASIC0.75□□□□□ -2.29
VPS13DQ5THJ4 AC022662.1-201ENST00000580252 331 ntBASIC0.75□□□□□ -2.29
VPS13DQ5THJ4 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC0.75□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms