Protein–RNA interactions for Protein: Q5SRE5

NUP188, Nucleoporin NUP188 homolog, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188Q5SRE5 ELOCP11-201ENST00000436690 332 ntBASIC1.69□□□□□ -2.14
NUP188Q5SRE5 ELOCP16-201ENST00000444494 332 ntBASIC1.69□□□□□ -2.14
NUP188Q5SRE5 COX6CP12-201ENST00000446748 202 ntBASIC1.69□□□□□ -2.14
NUP188Q5SRE5 RPL7P18-201ENST00000478965 734 ntBASIC1.69□□□□□ -2.14
NUP188Q5SRE5 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC1.69□□□□□ -2.14
NUP188Q5SRE5 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC1.69□□□□□ -2.14
NUP188Q5SRE5 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC1.69□□□□□ -2.14
NUP188Q5SRE5 MTCO1P47-201ENST00000523889 1271 ntBASIC1.69□□□□□ -2.14
NUP188Q5SRE5 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC1.69□□□□□ -2.14
NUP188Q5SRE5 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.69□□□□□ -2.14
NUP188Q5SRE5 AL138976.2-201ENST00000563989 694 ntBASIC1.69□□□□□ -2.14
NUP188Q5SRE5 MIR3122-201ENST00000577243 73 ntBASIC1.69□□□□□ -2.14
NUP188Q5SRE5 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC1.69□□□□□ -2.14
NUP188Q5SRE5 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
NUP188Q5SRE5 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
NUP188Q5SRE5 RNU6-799P-201ENST00000363567 107 ntBASIC1.69□□□□□ -2.14
NUP188Q5SRE5 AL355497.1-201ENST00000406262 551 ntBASIC1.69□□□□□ -2.14
NUP188Q5SRE5 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.69□□□□□ -2.14
NUP188Q5SRE5 RNU4-65P-201ENST00000410473 140 ntBASIC1.69□□□□□ -2.14
NUP188Q5SRE5 AC096533.1-201ENST00000411645 353 ntBASIC1.69□□□□□ -2.14
NUP188Q5SRE5 Z75741.2-201ENST00000417272 1167 ntBASIC1.69□□□□□ -2.14
NUP188Q5SRE5 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC1.69□□□□□ -2.14
NUP188Q5SRE5 AC005534.2-201ENST00000431047 433 ntBASIC1.69□□□□□ -2.14
NUP188Q5SRE5 AL035407.2-201ENST00000454090 378 ntBASIC1.69□□□□□ -2.14
NUP188Q5SRE5 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
NUP188Q5SRE5 HMGB3P3-201ENST00000510526 400 ntBASIC1.69□□□□□ -2.14
NUP188Q5SRE5 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC1.69□□□□□ -2.14
NUP188Q5SRE5 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC1.69□□□□□ -2.14
NUP188Q5SRE5 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC1.69□□□□□ -2.14
NUP188Q5SRE5 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC1.69□□□□□ -2.14
NUP188Q5SRE5 MOB4-205ENST00000409916 829 ntTSL 3 BASIC1.68□□□□□ -2.14
NUP188Q5SRE5 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC1.68□□□□□ -2.14
NUP188Q5SRE5 AC098592.2-201ENST00000413158 265 ntBASIC1.68□□□□□ -2.14
NUP188Q5SRE5 AL445669.1-201ENST00000426743 755 ntBASIC1.68□□□□□ -2.14
NUP188Q5SRE5 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.68□□□□□ -2.14
NUP188Q5SRE5 IPO7P1-201ENST00000442031 636 ntBASIC1.68□□□□□ -2.14
NUP188Q5SRE5 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
NUP188Q5SRE5 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC1.68□□□□□ -2.14
NUP188Q5SRE5 SNORD84-203ENST00000584275 78 ntBASIC1.68□□□□□ -2.14
NUP188Q5SRE5 AL161734.1-201ENST00000609720 557 ntBASIC1.68□□□□□ -2.14
NUP188Q5SRE5 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
NUP188Q5SRE5 AL138880.1-201ENST00000405824 642 ntBASIC1.67□□□□□ -2.14
NUP188Q5SRE5 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC1.67□□□□□ -2.14
NUP188Q5SRE5 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC1.67□□□□□ -2.14
NUP188Q5SRE5 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC1.67□□□□□ -2.14
NUP188Q5SRE5 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC1.67□□□□□ -2.14
NUP188Q5SRE5 NF1P3-201ENST00000457709 450 ntBASIC1.67□□□□□ -2.14
NUP188Q5SRE5 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.67□□□□□ -2.14
NUP188Q5SRE5 RNA5SP476-201ENST00000516613 103 ntBASIC1.67□□□□□ -2.14
NUP188Q5SRE5 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC1.67□□□□□ -2.14
NUP188Q5SRE5 AC079597.1-201ENST00000624306 508 ntBASIC1.67□□□□□ -2.14
NUP188Q5SRE5 MIR4496-201ENST00000635896 61 ntBASIC1.67□□□□□ -2.14
NUP188Q5SRE5 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
NUP188Q5SRE5 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
NUP188Q5SRE5 HMGN1P14-201ENST00000412459 517 ntBASIC1.66□□□□□ -2.14
NUP188Q5SRE5 UBE2FP3-201ENST00000436366 524 ntBASIC1.66□□□□□ -2.14
NUP188Q5SRE5 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.66□□□□□ -2.14
NUP188Q5SRE5 RPL37P6-202ENST00000464216 403 ntBASIC1.66□□□□□ -2.14
NUP188Q5SRE5 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC1.66□□□□□ -2.14
NUP188Q5SRE5 AC109635.4-202ENST00000531666 412 ntBASIC1.66□□□□□ -2.14
NUP188Q5SRE5 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.66□□□□□ -2.14
NUP188Q5SRE5 HSPE1P3-201ENST00000559254 309 ntBASIC1.66□□□□□ -2.14
NUP188Q5SRE5 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC1.66□□□□□ -2.14
NUP188Q5SRE5 AL133507.1-201ENST00000605269 557 ntBASIC1.66□□□□□ -2.14
NUP188Q5SRE5 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC1.66□□□□□ -2.14
NUP188Q5SRE5 AC008133.2-201ENST00000624540 351 ntBASIC1.66□□□□□ -2.14
NUP188Q5SRE5 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
NUP188Q5SRE5 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
NUP188Q5SRE5 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.66□□□□□ -2.14
NUP188Q5SRE5 AP001350.1-201ENST00000601906 1524 ntBASIC1.66□□□□□ -2.14
NUP188Q5SRE5 CD24P4-201ENST00000382840 243 ntBASIC1.66□□□□□ -2.14
NUP188Q5SRE5 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC1.66□□□□□ -2.14
NUP188Q5SRE5 RPL21P66-201ENST00000426566 466 ntBASIC1.66□□□□□ -2.14
NUP188Q5SRE5 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.66□□□□□ -2.14
NUP188Q5SRE5 SNRPEP4-201ENST00000435815 279 ntBASIC1.66□□□□□ -2.14
NUP188Q5SRE5 AL136380.1-201ENST00000447970 162 ntBASIC1.66□□□□□ -2.14
NUP188Q5SRE5 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC1.66□□□□□ -2.14
NUP188Q5SRE5 BZW1P2-201ENST00000473537 826 ntBASIC1.66□□□□□ -2.14
NUP188Q5SRE5 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
NUP188Q5SRE5 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC1.66□□□□□ -2.14
NUP188Q5SRE5 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.66□□□□□ -2.14
NUP188Q5SRE5 AC090821.2-201ENST00000523552 176 ntBASIC1.66□□□□□ -2.14
NUP188Q5SRE5 AP003033.1-201ENST00000527244 415 ntBASIC1.66□□□□□ -2.14
NUP188Q5SRE5 AL359851.1-201ENST00000569460 4997 ntBASIC1.65□□□□□ -2.15
NUP188Q5SRE5 MT-TP-201ENST00000387461 68 ntBASIC1.65□□□□□ -2.15
NUP188Q5SRE5 HMGN2P30-201ENST00000423237 256 ntBASIC1.65□□□□□ -2.15
NUP188Q5SRE5 UBE2V1P13-201ENST00000436983 439 ntBASIC1.65□□□□□ -2.15
NUP188Q5SRE5 FO393415.2-201ENST00000480085 343 ntBASIC1.65□□□□□ -2.15
NUP188Q5SRE5 AC092902.1-201ENST00000486999 259 ntBASIC1.65□□□□□ -2.15
NUP188Q5SRE5 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC1.65□□□□□ -2.15
NUP188Q5SRE5 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.65□□□□□ -2.15
NUP188Q5SRE5 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC1.65□□□□□ -2.15
NUP188Q5SRE5 AC007275.1-201ENST00000621243 671 ntBASIC1.65□□□□□ -2.15
NUP188Q5SRE5 MTND5P10-201ENST00000603719 1809 ntBASIC1.65□□□□□ -2.15
NUP188Q5SRE5 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.65□□□□□ -2.15
NUP188Q5SRE5 AP000648.3-201ENST00000623539 4507 ntBASIC1.64□□□□□ -2.15
NUP188Q5SRE5 SNORA18.2-201ENST00000383865 132 ntBASIC1.64□□□□□ -2.15
NUP188Q5SRE5 RNU6-629P-201ENST00000384061 103 ntBASIC1.64□□□□□ -2.15
NUP188Q5SRE5 AC016769.3-201ENST00000396562 315 ntBASIC1.64□□□□□ -2.15
NUP188Q5SRE5 STAT4-203ENST00000409995 709 ntTSL 5 BASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms