Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC4.11□□□□□ -1.75
SLC44A4Q53GD3 AC007363.1-201ENST00000604736 620 ntBASIC4.11□□□□□ -1.75
SLC44A4Q53GD3 AL035413.2-201ENST00000604801 525 ntBASIC4.11□□□□□ -1.75
SLC44A4Q53GD3 AC091167.4-201ENST00000605079 184 ntBASIC4.11□□□□□ -1.75
SLC44A4Q53GD3 AC064801.1-201ENST00000612025 407 ntBASIC4.11□□□□□ -1.75
SLC44A4Q53GD3 AC093838.1-201ENST00000613014 469 ntBASIC4.11□□□□□ -1.75
SLC44A4Q53GD3 TUG1_2.1-201ENST00000614234 87 ntBASIC4.11□□□□□ -1.75
SLC44A4Q53GD3 AL603758.1-201ENST00000618654 241 ntBASIC4.11□□□□□ -1.75
SLC44A4Q53GD3 MIR6130-201ENST00000619419 109 ntBASIC4.11□□□□□ -1.75
SLC44A4Q53GD3 AC139792.3-201ENST00000623525 224 ntBASIC4.11□□□□□ -1.75
SLC44A4Q53GD3 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.11□□□□□ -1.75
SLC44A4Q53GD3 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SLC44A4Q53GD3 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.11□□□□□ -1.75
SLC44A4Q53GD3 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SLC44A4Q53GD3 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
SLC44A4Q53GD3 AP004289.2-201ENST00000444413 1457 ntBASIC4.11□□□□□ -1.75
SLC44A4Q53GD3 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SLC44A4Q53GD3 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
SLC44A4Q53GD3 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC4.1□□□□□ -1.75
SLC44A4Q53GD3 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
SLC44A4Q53GD3 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SLC44A4Q53GD3 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.1□□□□□ -1.75
SLC44A4Q53GD3 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.1□□□□□ -1.75
SLC44A4Q53GD3 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.1□□□□□ -1.75
SLC44A4Q53GD3 RNU6-511P-201ENST00000363496 107 ntBASIC4.1□□□□□ -1.75
SLC44A4Q53GD3 U3.11-201ENST00000364476 212 ntBASIC4.1□□□□□ -1.75
SLC44A4Q53GD3 RNU4-76P-201ENST00000364509 141 ntBASIC4.1□□□□□ -1.75
SLC44A4Q53GD3 RNU1-39P-201ENST00000383897 165 ntBASIC4.1□□□□□ -1.75
SLC44A4Q53GD3 snosnR66.1-201ENST00000391095 99 ntBASIC4.1□□□□□ -1.75
SLC44A4Q53GD3 RPL21P24-201ENST00000413752 448 ntBASIC4.1□□□□□ -1.75
SLC44A4Q53GD3 MTCO3P12-201ENST00000416718 547 ntBASIC4.1□□□□□ -1.75
SLC44A4Q53GD3 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC4.1□□□□□ -1.75
SLC44A4Q53GD3 AC137499.1-201ENST00000427602 88 ntBASIC4.1□□□□□ -1.75
SLC44A4Q53GD3 GPR143P-201ENST00000434155 205 ntBASIC4.1□□□□□ -1.75
SLC44A4Q53GD3 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC4.1□□□□□ -1.75
SLC44A4Q53GD3 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC4.1□□□□□ -1.75
SLC44A4Q53GD3 AL118496.2-201ENST00000448300 230 ntBASIC4.1□□□□□ -1.75
SLC44A4Q53GD3 AL162389.1-201ENST00000449233 177 ntBASIC4.1□□□□□ -1.75
SLC44A4Q53GD3 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC4.1□□□□□ -1.75
SLC44A4Q53GD3 SNRPGP6-201ENST00000451124 220 ntBASIC4.1□□□□□ -1.75
SLC44A4Q53GD3 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC4.1□□□□□ -1.75
SLC44A4Q53GD3 RPL36AP13-201ENST00000457490 317 ntBASIC4.1□□□□□ -1.75
SLC44A4Q53GD3 AC022364.2-201ENST00000457963 554 ntBASIC4.1□□□□□ -1.75
SLC44A4Q53GD3 LRRC34P2-201ENST00000514850 553 ntBASIC4.1□□□□□ -1.75
SLC44A4Q53GD3 SNORA70.14-201ENST00000516205 110 ntBASIC4.1□□□□□ -1.75
SLC44A4Q53GD3 SNORA74D-201ENST00000516404 141 ntBASIC4.1□□□□□ -1.75
SLC44A4Q53GD3 RNU6-352P-201ENST00000516908 107 ntBASIC4.1□□□□□ -1.75
SLC44A4Q53GD3 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC4.1□□□□□ -1.75
SLC44A4Q53GD3 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC4.1□□□□□ -1.75
SLC44A4Q53GD3 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC4.1□□□□□ -1.75
SLC44A4Q53GD3 FAM60DP-201ENST00000524174 632 ntBASIC4.1□□□□□ -1.75
SLC44A4Q53GD3 AF235103.2-201ENST00000525753 346 ntBASIC4.1□□□□□ -1.75
SLC44A4Q53GD3 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.1□□□□□ -1.75
SLC44A4Q53GD3 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.1□□□□□ -1.75
SLC44A4Q53GD3 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.1□□□□□ -1.75
SLC44A4Q53GD3 MIR3200-201ENST00000580767 85 ntBASIC4.1□□□□□ -1.75
SLC44A4Q53GD3 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.1□□□□□ -1.75
SLC44A4Q53GD3 AC012507.3-201ENST00000603556 477 ntBASIC4.1□□□□□ -1.75
SLC44A4Q53GD3 AC025449.1-201ENST00000603896 529 ntBASIC4.1□□□□□ -1.75
SLC44A4Q53GD3 AL160281.1-201ENST00000605307 311 ntBASIC4.1□□□□□ -1.75
SLC44A4Q53GD3 AC005344.1-201ENST00000613391 459 ntBASIC4.1□□□□□ -1.75
SLC44A4Q53GD3 AC004696.1-201ENST00000614345 607 ntBASIC4.1□□□□□ -1.75
SLC44A4Q53GD3 U7.8-201ENST00000619968 63 ntBASIC4.1□□□□□ -1.75
SLC44A4Q53GD3 TNPO1P3-201ENST00000436471 2662 ntBASIC4.1□□□□□ -1.75
SLC44A4Q53GD3 AC138915.3-201ENST00000562908 1389 ntBASIC4.1□□□□□ -1.75
SLC44A4Q53GD3 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SLC44A4Q53GD3 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
SLC44A4Q53GD3 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
SLC44A4Q53GD3 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
SLC44A4Q53GD3 EXOC5P1-201ENST00000510543 1969 ntBASIC4.09□□□□□ -1.75
SLC44A4Q53GD3 AC073346.2-201ENST00000624724 2058 ntBASIC4.09□□□□□ -1.75
SLC44A4Q53GD3 XIAPP3-201ENST00000312918 795 ntBASIC4.09□□□□□ -1.75
SLC44A4Q53GD3 Y_RNA.22-201ENST00000362492 102 ntBASIC4.09□□□□□ -1.75
SLC44A4Q53GD3 SNORD35B-201ENST00000363660 87 ntBASIC4.09□□□□□ -1.75
SLC44A4Q53GD3 RNA5SP97-201ENST00000365006 84 ntBASIC4.09□□□□□ -1.75
SLC44A4Q53GD3 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
SLC44A4Q53GD3 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SLC44A4Q53GD3 RN7SKP177-201ENST00000410567 355 ntBASIC4.09□□□□□ -1.75
SLC44A4Q53GD3 SYF2P2-201ENST00000417620 583 ntBASIC4.09□□□□□ -1.75
SLC44A4Q53GD3 MTATP6P18-201ENST00000417994 673 ntBASIC4.09□□□□□ -1.75
SLC44A4Q53GD3 AL159169.1-201ENST00000421119 127 ntBASIC4.09□□□□□ -1.75
SLC44A4Q53GD3 AC093106.2-201ENST00000428212 385 ntBASIC4.09□□□□□ -1.75
SLC44A4Q53GD3 HMGN2P31-201ENST00000432430 273 ntBASIC4.09□□□□□ -1.75
SLC44A4Q53GD3 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.09□□□□□ -1.75
SLC44A4Q53GD3 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.09□□□□□ -1.75
SLC44A4Q53GD3 PRDX3P3-201ENST00000447765 522 ntBASIC4.09□□□□□ -1.75
SLC44A4Q53GD3 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC4.09□□□□□ -1.75
SLC44A4Q53GD3 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC4.09□□□□□ -1.75
SLC44A4Q53GD3 PMCHL2-203ENST00000457791 237 ntBASIC4.09□□□□□ -1.75
SLC44A4Q53GD3 AC079382.1-201ENST00000493346 557 ntBASIC4.09□□□□□ -1.75
SLC44A4Q53GD3 RNU6-1153P-201ENST00000516760 105 ntBASIC4.09□□□□□ -1.75
SLC44A4Q53GD3 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.09□□□□□ -1.75
SLC44A4Q53GD3 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC4.09□□□□□ -1.75
SLC44A4Q53GD3 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC4.09□□□□□ -1.75
SLC44A4Q53GD3 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC4.09□□□□□ -1.75
SLC44A4Q53GD3 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC4.09□□□□□ -1.75
SLC44A4Q53GD3 AC087045.1-201ENST00000605856 382 ntBASIC4.09□□□□□ -1.75
SLC44A4Q53GD3 AL121992.2-201ENST00000606262 256 ntBASIC4.09□□□□□ -1.75
SLC44A4Q53GD3 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.09□□□□□ -1.75
SLC44A4Q53GD3 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 132.7 ms