Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 UBE2V1P9-201ENST00000414760 368 ntBASIC1.56□□□□□ -2.16
CCDC58Q4VC31 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.56□□□□□ -2.16
CCDC58Q4VC31 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC1.56□□□□□ -2.16
CCDC58Q4VC31 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC1.56□□□□□ -2.16
CCDC58Q4VC31 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC1.56□□□□□ -2.16
CCDC58Q4VC31 AL360221.1-201ENST00000445989 335 ntBASIC1.56□□□□□ -2.16
CCDC58Q4VC31 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC1.56□□□□□ -2.16
CCDC58Q4VC31 AC022447.1-201ENST00000515358 464 ntBASIC1.56□□□□□ -2.16
CCDC58Q4VC31 MIR892C-201ENST00000516410 77 ntBASIC1.56□□□□□ -2.16
CCDC58Q4VC31 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC1.56□□□□□ -2.16
CCDC58Q4VC31 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC1.56□□□□□ -2.16
CCDC58Q4VC31 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC1.56□□□□□ -2.16
CCDC58Q4VC31 AC068313.1-201ENST00000604028 1008 ntBASIC1.56□□□□□ -2.16
CCDC58Q4VC31 AC097504.2-201ENST00000608088 454 ntBASIC1.56□□□□□ -2.16
CCDC58Q4VC31 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC1.56□□□□□ -2.16
CCDC58Q4VC31 AC068057.2-201ENST00000624047 895 ntBASIC1.56□□□□□ -2.16
CCDC58Q4VC31 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC1.56□□□□□ -2.16
CCDC58Q4VC31 ATP8A2P3-201ENST00000426792 1536 ntBASIC1.56□□□□□ -2.16
CCDC58Q4VC31 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
CCDC58Q4VC31 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
CCDC58Q4VC31 MIR126-201ENST00000362291 85 ntBASIC1.55□□□□□ -2.16
CCDC58Q4VC31 AC068050.1-201ENST00000394891 380 ntBASIC1.55□□□□□ -2.16
CCDC58Q4VC31 MIR1290-201ENST00000408735 78 ntBASIC1.55□□□□□ -2.16
CCDC58Q4VC31 RNU2-17P-201ENST00000410290 190 ntBASIC1.55□□□□□ -2.16
CCDC58Q4VC31 RN7SKP51-201ENST00000410781 304 ntBASIC1.55□□□□□ -2.16
CCDC58Q4VC31 AC008173.1-201ENST00000418901 264 ntBASIC1.55□□□□□ -2.16
CCDC58Q4VC31 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC1.55□□□□□ -2.16
CCDC58Q4VC31 AL035410.1-201ENST00000427409 427 ntBASIC1.55□□□□□ -2.16
CCDC58Q4VC31 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC1.55□□□□□ -2.16
CCDC58Q4VC31 HMGB1P9-201ENST00000429856 646 ntBASIC1.55□□□□□ -2.16
CCDC58Q4VC31 AL353705.4-201ENST00000449661 238 ntBASIC1.55□□□□□ -2.16
CCDC58Q4VC31 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC1.55□□□□□ -2.16
CCDC58Q4VC31 EEF1A1P37-201ENST00000522748 715 ntBASIC1.55□□□□□ -2.16
CCDC58Q4VC31 EEF1B2P4-201ENST00000551398 348 ntBASIC1.55□□□□□ -2.16
CCDC58Q4VC31 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC1.55□□□□□ -2.16
CCDC58Q4VC31 MTCYBP27-201ENST00000555160 670 ntBASIC1.55□□□□□ -2.16
CCDC58Q4VC31 AL133241.1-201ENST00000556832 487 ntBASIC1.55□□□□□ -2.16
CCDC58Q4VC31 AL354943.1-201ENST00000572103 781 ntBASIC1.55□□□□□ -2.16
CCDC58Q4VC31 MIR3199-1-201ENST00000582434 88 ntBASIC1.55□□□□□ -2.16
CCDC58Q4VC31 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC1.55□□□□□ -2.16
CCDC58Q4VC31 AC068790.3-201ENST00000602988 553 ntBASIC1.55□□□□□ -2.16
CCDC58Q4VC31 RPAP2P1-201ENST00000603626 1168 ntBASIC1.55□□□□□ -2.16
CCDC58Q4VC31 AC004775.1-201ENST00000607389 753 ntBASIC1.55□□□□□ -2.16
CCDC58Q4VC31 AL773524.1-201ENST00000614065 229 ntBASIC1.55□□□□□ -2.16
CCDC58Q4VC31 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
CCDC58Q4VC31 AK9-203ENST00000368948 2478 ntTSL 5 BASIC1.54□□□□□ -2.16
CCDC58Q4VC31 DEFB108F-201ENST00000344638 222 ntBASIC1.54□□□□□ -2.16
CCDC58Q4VC31 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC1.54□□□□□ -2.16
CCDC58Q4VC31 RNU6-444P-201ENST00000383988 108 ntBASIC1.54□□□□□ -2.16
CCDC58Q4VC31 SNORA11.1-201ENST00000408133 129 ntBASIC1.54□□□□□ -2.16
CCDC58Q4VC31 RN7SKP223-201ENST00000410582 62 ntBASIC1.54□□□□□ -2.16
CCDC58Q4VC31 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.54□□□□□ -2.16
CCDC58Q4VC31 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC1.54□□□□□ -2.16
CCDC58Q4VC31 AC010881.1-201ENST00000433830 235 ntBASIC1.54□□□□□ -2.16
CCDC58Q4VC31 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC1.54□□□□□ -2.16
CCDC58Q4VC31 USP9YP15-201ENST00000442391 422 ntBASIC1.54□□□□□ -2.16
CCDC58Q4VC31 FABP5P13-201ENST00000452144 328 ntBASIC1.54□□□□□ -2.16
CCDC58Q4VC31 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC1.54□□□□□ -2.16
CCDC58Q4VC31 VPS26AP1-201ENST00000483197 979 ntBASIC1.54□□□□□ -2.16
CCDC58Q4VC31 SUMO1P1-201ENST00000497904 306 ntBASIC1.54□□□□□ -2.16
CCDC58Q4VC31 RPL38P4-201ENST00000502376 214 ntBASIC1.54□□□□□ -2.16
CCDC58Q4VC31 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.54□□□□□ -2.16
CCDC58Q4VC31 RNA5SP182-201ENST00000516064 82 ntBASIC1.54□□□□□ -2.16
CCDC58Q4VC31 DEFB108D-201ENST00000527787 222 ntBASIC1.54□□□□□ -2.16
CCDC58Q4VC31 OR4P1P-201ENST00000530808 1136 ntBASIC1.54□□□□□ -2.16
CCDC58Q4VC31 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC1.54□□□□□ -2.16
CCDC58Q4VC31 AC087465.1-201ENST00000560574 245 ntBASIC1.54□□□□□ -2.16
CCDC58Q4VC31 AC104581.2-201ENST00000572227 430 ntBASIC1.54□□□□□ -2.16
CCDC58Q4VC31 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC1.54□□□□□ -2.16
CCDC58Q4VC31 AC010738.1-201ENST00000604970 987 ntBASIC1.54□□□□□ -2.16
CCDC58Q4VC31 AP002791.1-201ENST00000623291 381 ntBASIC1.54□□□□□ -2.16
CCDC58Q4VC31 U6.107-201ENST00000637108 79 ntBASIC1.54□□□□□ -2.16
CCDC58Q4VC31 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC1.54□□□□□ -2.16
CCDC58Q4VC31 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
CCDC58Q4VC31 MIR1294-201ENST00000408503 142 ntBASIC1.53□□□□□ -2.16
CCDC58Q4VC31 AL133384.1-201ENST00000412744 351 ntBASIC1.53□□□□□ -2.16
CCDC58Q4VC31 Z85995.1-201ENST00000415547 335 ntBASIC1.53□□□□□ -2.16
CCDC58Q4VC31 LINC01347-201ENST00000417964 355 ntBASIC1.53□□□□□ -2.16
CCDC58Q4VC31 AL158823.1-201ENST00000418441 478 ntBASIC1.53□□□□□ -2.16
CCDC58Q4VC31 Z98742.3-201ENST00000418637 326 ntBASIC1.53□□□□□ -2.16
CCDC58Q4VC31 AC012497.1-201ENST00000429392 575 ntBASIC1.53□□□□□ -2.16
CCDC58Q4VC31 MICF-203ENST00000432679 129 ntBASIC1.53□□□□□ -2.16
CCDC58Q4VC31 AL512661.1-201ENST00000434586 1253 ntBASIC1.53□□□□□ -2.16
CCDC58Q4VC31 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC1.53□□□□□ -2.16
CCDC58Q4VC31 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.53□□□□□ -2.16
CCDC58Q4VC31 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.53□□□□□ -2.16
CCDC58Q4VC31 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC1.53□□□□□ -2.16
CCDC58Q4VC31 snoU109.4-201ENST00000458953 143 ntBASIC1.53□□□□□ -2.16
CCDC58Q4VC31 AC027575.1-201ENST00000481064 460 ntBASIC1.53□□□□□ -2.16
CCDC58Q4VC31 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC1.53□□□□□ -2.16
CCDC58Q4VC31 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC1.53□□□□□ -2.16
CCDC58Q4VC31 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.53□□□□□ -2.16
CCDC58Q4VC31 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.53□□□□□ -2.16
CCDC58Q4VC31 HMGB1P1-201ENST00000522557 636 ntBASIC1.53□□□□□ -2.16
CCDC58Q4VC31 AP005435.4-201ENST00000529514 284 ntBASIC1.53□□□□□ -2.16
CCDC58Q4VC31 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.53□□□□□ -2.16
CCDC58Q4VC31 AC068722.2-201ENST00000618734 544 ntBASIC1.53□□□□□ -2.16
CCDC58Q4VC31 HSPA8P4-201ENST00000511877 1920 ntBASIC1.52□□□□□ -2.17
CCDC58Q4VC31 MTND5P10-201ENST00000603719 1809 ntBASIC1.52□□□□□ -2.17
CCDC58Q4VC31 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms