Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 AF213884.1-201ENST00000488102 463 ntBASIC4.76□□□□□ -1.65
CCDC144BQ3MJ40 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.76□□□□□ -1.65
CCDC144BQ3MJ40 AC017037.1-201ENST00000508460 471 ntBASIC4.76□□□□□ -1.65
CCDC144BQ3MJ40 PCBP2P3-201ENST00000509726 843 ntBASIC4.76□□□□□ -1.65
CCDC144BQ3MJ40 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC4.76□□□□□ -1.65
CCDC144BQ3MJ40 SNORD60.2-201ENST00000516883 86 ntBASIC4.76□□□□□ -1.65
CCDC144BQ3MJ40 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC4.76□□□□□ -1.65
CCDC144BQ3MJ40 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.76□□□□□ -1.65
CCDC144BQ3MJ40 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC4.76□□□□□ -1.65
CCDC144BQ3MJ40 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.76□□□□□ -1.65
CCDC144BQ3MJ40 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC4.76□□□□□ -1.65
CCDC144BQ3MJ40 MIR4703-201ENST00000577728 79 ntBASIC4.76□□□□□ -1.65
CCDC144BQ3MJ40 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CCDC144BQ3MJ40 AC012409.4-201ENST00000612923 249 ntBASIC4.76□□□□□ -1.65
CCDC144BQ3MJ40 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
CCDC144BQ3MJ40 AC079684.1-201ENST00000621405 437 ntBASIC4.76□□□□□ -1.65
CCDC144BQ3MJ40 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC4.76□□□□□ -1.65
CCDC144BQ3MJ40 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.76□□□□□ -1.65
CCDC144BQ3MJ40 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
CCDC144BQ3MJ40 MTND4P14-201ENST00000435799 1354 ntBASIC4.76□□□□□ -1.65
CCDC144BQ3MJ40 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
CCDC144BQ3MJ40 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CCDC144BQ3MJ40 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CCDC144BQ3MJ40 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CCDC144BQ3MJ40 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CCDC144BQ3MJ40 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CCDC144BQ3MJ40 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
CCDC144BQ3MJ40 AL139276.1-201ENST00000311910 1001 ntBASIC4.75□□□□□ -1.65
CCDC144BQ3MJ40 RNY3P3-201ENST00000363816 102 ntBASIC4.75□□□□□ -1.65
CCDC144BQ3MJ40 Y_RNA.381-201ENST00000365666 102 ntBASIC4.75□□□□□ -1.65
CCDC144BQ3MJ40 RNU6-741P-201ENST00000383889 107 ntBASIC4.75□□□□□ -1.65
CCDC144BQ3MJ40 Y_RNA.576-201ENST00000384781 102 ntBASIC4.75□□□□□ -1.65
CCDC144BQ3MJ40 AC080125.1-201ENST00000414888 684 ntBASIC4.75□□□□□ -1.65
CCDC144BQ3MJ40 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC4.75□□□□□ -1.65
CCDC144BQ3MJ40 CYP4F29P-201ENST00000420685 446 ntBASIC4.75□□□□□ -1.65
CCDC144BQ3MJ40 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC4.75□□□□□ -1.65
CCDC144BQ3MJ40 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.75□□□□□ -1.65
CCDC144BQ3MJ40 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC4.75□□□□□ -1.65
CCDC144BQ3MJ40 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.75□□□□□ -1.65
CCDC144BQ3MJ40 ATP5JP1-201ENST00000431631 322 ntBASIC4.75□□□□□ -1.65
CCDC144BQ3MJ40 MTCO3P18-201ENST00000440206 761 ntBASIC4.75□□□□□ -1.65
CCDC144BQ3MJ40 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC4.75□□□□□ -1.65
CCDC144BQ3MJ40 AC073415.1-201ENST00000449240 153 ntBASIC4.75□□□□□ -1.65
CCDC144BQ3MJ40 TRBV1-201ENST00000476502 284 ntBASIC4.75□□□□□ -1.65
CCDC144BQ3MJ40 AC006517.1-201ENST00000480485 328 ntBASIC4.75□□□□□ -1.65
CCDC144BQ3MJ40 AC233702.1-201ENST00000482905 502 ntBASIC4.75□□□□□ -1.65
CCDC144BQ3MJ40 RPL39P36-201ENST00000490784 156 ntBASIC4.75□□□□□ -1.65
CCDC144BQ3MJ40 AL160314.1-201ENST00000490836 438 ntBASIC4.75□□□□□ -1.65
CCDC144BQ3MJ40 AP001086.1-201ENST00000494882 321 ntBASIC4.75□□□□□ -1.65
CCDC144BQ3MJ40 FCF1P3-201ENST00000496394 590 ntBASIC4.75□□□□□ -1.65
CCDC144BQ3MJ40 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC4.75□□□□□ -1.65
CCDC144BQ3MJ40 AC104806.1-201ENST00000508720 308 ntBASIC4.75□□□□□ -1.65
CCDC144BQ3MJ40 RNA5SP143-201ENST00000516936 115 ntBASIC4.75□□□□□ -1.65
CCDC144BQ3MJ40 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC4.75□□□□□ -1.65
CCDC144BQ3MJ40 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC4.75□□□□□ -1.65
CCDC144BQ3MJ40 AC004024.1-201ENST00000549244 247 ntBASIC4.75□□□□□ -1.65
CCDC144BQ3MJ40 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC4.75□□□□□ -1.65
CCDC144BQ3MJ40 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.75□□□□□ -1.65
CCDC144BQ3MJ40 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CCDC144BQ3MJ40 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CCDC144BQ3MJ40 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CCDC144BQ3MJ40 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.75□□□□□ -1.65
CCDC144BQ3MJ40 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.74□□□□□ -1.65
CCDC144BQ3MJ40 PTMAP2-201ENST00000397627 327 ntBASIC4.74□□□□□ -1.65
CCDC144BQ3MJ40 HSPE1P8-201ENST00000406997 288 ntBASIC4.74□□□□□ -1.65
CCDC144BQ3MJ40 RNA5SP118-201ENST00000410385 109 ntBASIC4.74□□□□□ -1.65
CCDC144BQ3MJ40 RNU4-46P-201ENST00000410818 138 ntBASIC4.74□□□□□ -1.65
CCDC144BQ3MJ40 RPS12P24-201ENST00000412619 387 ntBASIC4.74□□□□□ -1.65
CCDC144BQ3MJ40 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.74□□□□□ -1.65
CCDC144BQ3MJ40 RBM6-203ENST00000421682 684 ntTSL 2 BASIC4.74□□□□□ -1.65
CCDC144BQ3MJ40 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC4.74□□□□□ -1.65
CCDC144BQ3MJ40 GTF2IP20-201ENST00000431663 360 ntBASIC4.74□□□□□ -1.65
CCDC144BQ3MJ40 AL591212.2-201ENST00000433923 257 ntBASIC4.74□□□□□ -1.65
CCDC144BQ3MJ40 TAAR7P-201ENST00000436141 242 ntBASIC4.74□□□□□ -1.65
CCDC144BQ3MJ40 VN1R34P-201ENST00000447387 883 ntBASIC4.74□□□□□ -1.65
CCDC144BQ3MJ40 WASF1P1-201ENST00000447560 1131 ntBASIC4.74□□□□□ -1.65
CCDC144BQ3MJ40 CACYBPP2-201ENST00000453625 678 ntBASIC4.74□□□□□ -1.65
CCDC144BQ3MJ40 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC4.74□□□□□ -1.65
CCDC144BQ3MJ40 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC4.74□□□□□ -1.65
CCDC144BQ3MJ40 RPS23P3-201ENST00000470993 430 ntBASIC4.74□□□□□ -1.65
CCDC144BQ3MJ40 RNU4ATAC8P-201ENST00000516196 109 ntBASIC4.74□□□□□ -1.65
CCDC144BQ3MJ40 Y_RNA.689-201ENST00000516589 107 ntBASIC4.74□□□□□ -1.65
CCDC144BQ3MJ40 RN7SKP219-201ENST00000516825 296 ntBASIC4.74□□□□□ -1.65
CCDC144BQ3MJ40 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC4.74□□□□□ -1.65
CCDC144BQ3MJ40 AC006064.5-201ENST00000541782 248 ntBASIC4.74□□□□□ -1.65
CCDC144BQ3MJ40 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC4.74□□□□□ -1.65
CCDC144BQ3MJ40 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.74□□□□□ -1.65
CCDC144BQ3MJ40 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC4.74□□□□□ -1.65
CCDC144BQ3MJ40 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.74□□□□□ -1.65
CCDC144BQ3MJ40 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC4.74□□□□□ -1.65
CCDC144BQ3MJ40 ZNF192P1-203ENST00000565888 810 ntBASIC4.74□□□□□ -1.65
CCDC144BQ3MJ40 MTCO3P24-201ENST00000572729 782 ntBASIC4.74□□□□□ -1.65
CCDC144BQ3MJ40 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC4.74□□□□□ -1.65
CCDC144BQ3MJ40 RMST_9.1-201ENST00000619945 193 ntBASIC4.74□□□□□ -1.65
CCDC144BQ3MJ40 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CCDC144BQ3MJ40 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.74□□□□□ -1.65
CCDC144BQ3MJ40 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CCDC144BQ3MJ40 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CCDC144BQ3MJ40 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CCDC144BQ3MJ40 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms