Protein–RNA interactions for Protein: Q3B726

TWISTNB, DNA-directed RNA polymerase I subunit RPA43, humanhuman

Predicted RBP Predictions only

Length 338 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TWISTNBQ3B726 RNU5E-8P-201ENST00000363502 116 ntBASIC3.3□□□□□ -1.88
TWISTNBQ3B726 RNA5SP68-201ENST00000363885 119 ntBASIC3.3□□□□□ -1.88
TWISTNBQ3B726 RNU1-100P-201ENST00000365255 165 ntBASIC3.3□□□□□ -1.88
TWISTNBQ3B726 RNU6-637P-201ENST00000384050 107 ntBASIC3.3□□□□□ -1.88
TWISTNBQ3B726 SNORA48.8-201ENST00000391324 134 ntBASIC3.3□□□□□ -1.88
TWISTNBQ3B726 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC3.3□□□□□ -1.88
TWISTNBQ3B726 RNA5SP38-201ENST00000410750 119 ntBASIC3.3□□□□□ -1.88
TWISTNBQ3B726 RNU6-516P-201ENST00000411381 104 ntBASIC3.3□□□□□ -1.88
TWISTNBQ3B726 RPL7L1P10-201ENST00000427790 463 ntBASIC3.3□□□□□ -1.88
TWISTNBQ3B726 MTND1P20-201ENST00000430341 950 ntBASIC3.3□□□□□ -1.88
TWISTNBQ3B726 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.3□□□□□ -1.88
TWISTNBQ3B726 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.3□□□□□ -1.88
TWISTNBQ3B726 AC126389.1-201ENST00000477436 290 ntBASIC3.3□□□□□ -1.88
TWISTNBQ3B726 RPL30P14-201ENST00000482744 348 ntBASIC3.3□□□□□ -1.88
TWISTNBQ3B726 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
TWISTNBQ3B726 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC3.3□□□□□ -1.88
TWISTNBQ3B726 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.3□□□□□ -1.88
TWISTNBQ3B726 POU5F1P7-201ENST00000508759 541 ntBASIC3.3□□□□□ -1.88
TWISTNBQ3B726 AC093809.1-201ENST00000509155 340 ntBASIC3.3□□□□□ -1.88
TWISTNBQ3B726 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC3.3□□□□□ -1.88
TWISTNBQ3B726 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.3□□□□□ -1.88
TWISTNBQ3B726 AC128657.1-201ENST00000549459 145 ntBASIC3.3□□□□□ -1.88
TWISTNBQ3B726 AC060771.1-201ENST00000582031 164 ntBASIC3.3□□□□□ -1.88
TWISTNBQ3B726 NRBF2P5-201ENST00000603087 788 ntBASIC3.3□□□□□ -1.88
TWISTNBQ3B726 AC093424.1-201ENST00000604999 338 ntBASIC3.3□□□□□ -1.88
TWISTNBQ3B726 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.3□□□□□ -1.88
TWISTNBQ3B726 AC024560.3-201ENST00000608482 349 ntBASIC3.3□□□□□ -1.88
TWISTNBQ3B726 AP000254.1-201ENST00000609934 520 ntBASIC3.3□□□□□ -1.88
TWISTNBQ3B726 AC069234.5-201ENST00000611056 416 ntBASIC3.3□□□□□ -1.88
TWISTNBQ3B726 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC3.3□□□□□ -1.88
TWISTNBQ3B726 MIR6817-201ENST00000615588 66 ntBASIC3.3□□□□□ -1.88
TWISTNBQ3B726 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC3.3□□□□□ -1.88
TWISTNBQ3B726 SNORA50A-202ENST00000629536 136 ntBASIC3.3□□□□□ -1.88
TWISTNBQ3B726 AL136360.1-201ENST00000503377 1900 ntBASIC3.3□□□□□ -1.88
TWISTNBQ3B726 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.3□□□□□ -1.88
TWISTNBQ3B726 AC110774.1-201ENST00000623567 2018 ntBASIC3.29□□□□□ -1.88
TWISTNBQ3B726 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
TWISTNBQ3B726 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.29□□□□□ -1.88
TWISTNBQ3B726 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
TWISTNBQ3B726 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
TWISTNBQ3B726 Y_RNA.18-201ENST00000362461 102 ntBASIC3.29□□□□□ -1.88
TWISTNBQ3B726 RNU6-433P-201ENST00000363216 104 ntBASIC3.29□□□□□ -1.88
TWISTNBQ3B726 U3.12-201ENST00000364498 214 ntBASIC3.29□□□□□ -1.88
TWISTNBQ3B726 RNU6-359P-201ENST00000365466 108 ntBASIC3.29□□□□□ -1.88
TWISTNBQ3B726 SNORA1.3-201ENST00000384676 136 ntBASIC3.29□□□□□ -1.88
TWISTNBQ3B726 UBE2V1P2-201ENST00000397758 440 ntBASIC3.29□□□□□ -1.88
TWISTNBQ3B726 AC119751.3-201ENST00000399720 670 ntBASIC3.29□□□□□ -1.88
TWISTNBQ3B726 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.29□□□□□ -1.88
TWISTNBQ3B726 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC3.29□□□□□ -1.88
TWISTNBQ3B726 HMGB1P11-201ENST00000413899 637 ntBASIC3.29□□□□□ -1.88
TWISTNBQ3B726 HSPE1P1-201ENST00000421494 318 ntBASIC3.29□□□□□ -1.88
TWISTNBQ3B726 AL035407.1-201ENST00000429211 571 ntBASIC3.29□□□□□ -1.88
TWISTNBQ3B726 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC3.29□□□□□ -1.88
TWISTNBQ3B726 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.29□□□□□ -1.88
TWISTNBQ3B726 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC3.29□□□□□ -1.88
TWISTNBQ3B726 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC3.29□□□□□ -1.88
TWISTNBQ3B726 AC010265.1-201ENST00000513509 211 ntBASIC3.29□□□□□ -1.88
TWISTNBQ3B726 RNA5SP320-201ENST00000516263 124 ntBASIC3.29□□□□□ -1.88
TWISTNBQ3B726 RN7SKP287-201ENST00000516546 266 ntBASIC3.29□□□□□ -1.88
TWISTNBQ3B726 SNORA31.22-201ENST00000517204 135 ntBASIC3.29□□□□□ -1.88
TWISTNBQ3B726 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC3.29□□□□□ -1.88
TWISTNBQ3B726 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3.29□□□□□ -1.88
TWISTNBQ3B726 AC123904.3-201ENST00000547218 814 ntBASIC3.29□□□□□ -1.88
TWISTNBQ3B726 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3.29□□□□□ -1.88
TWISTNBQ3B726 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.29□□□□□ -1.88
TWISTNBQ3B726 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.29□□□□□ -1.88
TWISTNBQ3B726 AC099778.2-201ENST00000610904 211 ntBASIC3.29□□□□□ -1.88
TWISTNBQ3B726 AC021755.4-201ENST00000616620 456 ntBASIC3.29□□□□□ -1.88
TWISTNBQ3B726 AL603758.1-201ENST00000618654 241 ntBASIC3.29□□□□□ -1.88
TWISTNBQ3B726 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC3.29□□□□□ -1.88
TWISTNBQ3B726 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
TWISTNBQ3B726 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
TWISTNBQ3B726 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
TWISTNBQ3B726 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
TWISTNBQ3B726 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.28□□□□□ -1.88
TWISTNBQ3B726 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
TWISTNBQ3B726 ZNF736P9Y-201ENST00000439586 1345 ntBASIC3.28□□□□□ -1.88
TWISTNBQ3B726 SNORD113-6-201ENST00000363345 75 ntBASIC3.28□□□□□ -1.88
TWISTNBQ3B726 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC3.28□□□□□ -1.88
TWISTNBQ3B726 RNU1-39P-201ENST00000383897 165 ntBASIC3.28□□□□□ -1.88
TWISTNBQ3B726 SNORD21-201ENST00000383953 95 ntBASIC3.28□□□□□ -1.88
TWISTNBQ3B726 U3.20-201ENST00000390909 217 ntBASIC3.28□□□□□ -1.88
TWISTNBQ3B726 RSL24D1P4-201ENST00000400938 484 ntBASIC3.28□□□□□ -1.88
TWISTNBQ3B726 AL031121.1-201ENST00000406553 254 ntBASIC3.28□□□□□ -1.88
TWISTNBQ3B726 PPP1R11P2-201ENST00000423543 382 ntBASIC3.28□□□□□ -1.88
TWISTNBQ3B726 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.28□□□□□ -1.88
TWISTNBQ3B726 AC008850.1-201ENST00000427546 362 ntBASIC3.28□□□□□ -1.88
TWISTNBQ3B726 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC3.28□□□□□ -1.88
TWISTNBQ3B726 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.28□□□□□ -1.88
TWISTNBQ3B726 GAPDHP27-201ENST00000447427 1020 ntBASIC3.28□□□□□ -1.88
TWISTNBQ3B726 AL590664.1-201ENST00000448065 339 ntBASIC3.28□□□□□ -1.88
TWISTNBQ3B726 SNORA59A-201ENST00000459326 152 ntBASIC3.28□□□□□ -1.88
TWISTNBQ3B726 AC072039.1-201ENST00000477611 581 ntBASIC3.28□□□□□ -1.88
TWISTNBQ3B726 HSPE1P6-201ENST00000479457 291 ntBASIC3.28□□□□□ -1.88
TWISTNBQ3B726 AC034222.1-201ENST00000494052 532 ntBASIC3.28□□□□□ -1.88
TWISTNBQ3B726 AC106872.3-201ENST00000495104 446 ntBASIC3.28□□□□□ -1.88
TWISTNBQ3B726 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC3.28□□□□□ -1.88
TWISTNBQ3B726 AC112673.1-201ENST00000513168 575 ntBASIC3.28□□□□□ -1.88
TWISTNBQ3B726 RNA5SP148-201ENST00000516527 94 ntBASIC3.28□□□□□ -1.88
TWISTNBQ3B726 AC087276.1-201ENST00000529659 480 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms