Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 RPS15AP12-201ENST00000419498 388 ntBASIC1.96□□□□□ -2.1
RFX7Q2KHR2 AL358075.3-201ENST00000426289 226 ntBASIC1.96□□□□□ -2.1
RFX7Q2KHR2 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC1.96□□□□□ -2.1
RFX7Q2KHR2 RNU7-95P-201ENST00000459222 64 ntBASIC1.96□□□□□ -2.1
RFX7Q2KHR2 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.96□□□□□ -2.1
RFX7Q2KHR2 MTCYBP17-201ENST00000503579 789 ntBASIC1.96□□□□□ -2.1
RFX7Q2KHR2 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC1.96□□□□□ -2.1
RFX7Q2KHR2 AC022447.3-201ENST00000506865 495 ntBASIC1.96□□□□□ -2.1
RFX7Q2KHR2 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.96□□□□□ -2.1
RFX7Q2KHR2 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC1.96□□□□□ -2.1
RFX7Q2KHR2 AP005435.4-201ENST00000529514 284 ntBASIC1.96□□□□□ -2.1
RFX7Q2KHR2 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC1.96□□□□□ -2.1
RFX7Q2KHR2 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC1.96□□□□□ -2.1
RFX7Q2KHR2 AC115989.2-201ENST00000578640 563 ntBASIC1.96□□□□□ -2.1
RFX7Q2KHR2 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC1.96□□□□□ -2.1
RFX7Q2KHR2 AC004852.3-201ENST00000614131 326 ntBASIC1.96□□□□□ -2.1
RFX7Q2KHR2 SDAD1P2-201ENST00000441308 2028 ntBASIC1.96□□□□□ -2.1
RFX7Q2KHR2 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
RFX7Q2KHR2 AC005539.1-201ENST00000443768 1479 ntBASIC1.95□□□□□ -2.1
RFX7Q2KHR2 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC1.95□□□□□ -2.1
RFX7Q2KHR2 MIR17-201ENST00000385012 84 ntBASIC1.95□□□□□ -2.1
RFX7Q2KHR2 MCTS2P-201ENST00000394552 546 ntBASIC1.95□□□□□ -2.1
RFX7Q2KHR2 MTATP6P31-201ENST00000406985 692 ntBASIC1.95□□□□□ -2.1
RFX7Q2KHR2 MIR1323-201ENST00000408090 73 ntBASIC1.95□□□□□ -2.1
RFX7Q2KHR2 RPL7L1P10-201ENST00000427790 463 ntBASIC1.95□□□□□ -2.1
RFX7Q2KHR2 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC1.95□□□□□ -2.1
RFX7Q2KHR2 TRAPPC13P1-201ENST00000435991 1062 ntBASIC1.95□□□□□ -2.1
RFX7Q2KHR2 AC092473.1-201ENST00000441098 221 ntBASIC1.95□□□□□ -2.1
RFX7Q2KHR2 SNRPGP9-201ENST00000456025 225 ntBASIC1.95□□□□□ -2.1
RFX7Q2KHR2 AMD1P1-201ENST00000457220 922 ntBASIC1.95□□□□□ -2.1
RFX7Q2KHR2 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.95□□□□□ -2.1
RFX7Q2KHR2 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC1.95□□□□□ -2.1
RFX7Q2KHR2 AC008562.1-201ENST00000521763 330 ntBASIC1.95□□□□□ -2.1
RFX7Q2KHR2 AC004923.2-201ENST00000529649 369 ntBASIC1.95□□□□□ -2.1
RFX7Q2KHR2 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC1.95□□□□□ -2.1
RFX7Q2KHR2 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.95□□□□□ -2.1
RFX7Q2KHR2 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC1.95□□□□□ -2.1
RFX7Q2KHR2 UCA1.1-201ENST00000620952 75 ntBASIC1.95□□□□□ -2.1
RFX7Q2KHR2 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
RFX7Q2KHR2 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC1.94□□□□□ -2.1
RFX7Q2KHR2 Y_RNA.116-201ENST00000363292 103 ntBASIC1.94□□□□□ -2.1
RFX7Q2KHR2 Y_RNA.122-201ENST00000363331 96 ntBASIC1.94□□□□□ -2.1
RFX7Q2KHR2 Y_RNA.796-201ENST00000364268 102 ntBASIC1.94□□□□□ -2.1
RFX7Q2KHR2 Y_RNA.799-201ENST00000364992 102 ntBASIC1.94□□□□□ -2.1
RFX7Q2KHR2 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC1.94□□□□□ -2.1
RFX7Q2KHR2 RPS7P9-201ENST00000414704 586 ntBASIC1.94□□□□□ -2.1
RFX7Q2KHR2 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.94□□□□□ -2.1
RFX7Q2KHR2 SEPT2P1-201ENST00000419651 180 ntBASIC1.94□□□□□ -2.1
RFX7Q2KHR2 AL009174.1-201ENST00000426577 416 ntBASIC1.94□□□□□ -2.1
RFX7Q2KHR2 AL365496.1-201ENST00000426885 215 ntBASIC1.94□□□□□ -2.1
RFX7Q2KHR2 AC006548.1-201ENST00000427470 102 ntBASIC1.94□□□□□ -2.1
RFX7Q2KHR2 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC1.94□□□□□ -2.1
RFX7Q2KHR2 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC1.94□□□□□ -2.1
RFX7Q2KHR2 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC1.94□□□□□ -2.1
RFX7Q2KHR2 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC1.94□□□□□ -2.1
RFX7Q2KHR2 CR381572.1-201ENST00000625098 102 ntBASIC1.94□□□□□ -2.1
RFX7Q2KHR2 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
RFX7Q2KHR2 AK9-203ENST00000368948 2478 ntTSL 5 BASIC1.93□□□□□ -2.1
RFX7Q2KHR2 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.93□□□□□ -2.1
RFX7Q2KHR2 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
RFX7Q2KHR2 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.93□□□□□ -2.1
RFX7Q2KHR2 RNU4-13P-201ENST00000364019 141 ntBASIC1.93□□□□□ -2.1
RFX7Q2KHR2 RNU1-57P-201ENST00000384491 166 ntBASIC1.93□□□□□ -2.1
RFX7Q2KHR2 AP002784.2-201ENST00000397300 549 ntBASIC1.93□□□□□ -2.1
RFX7Q2KHR2 RNU6-920P-201ENST00000410926 92 ntBASIC1.93□□□□□ -2.1
RFX7Q2KHR2 NDUFA5P4-201ENST00000436704 385 ntBASIC1.93□□□□□ -2.1
RFX7Q2KHR2 BNIP3P2-201ENST00000441221 577 ntBASIC1.93□□□□□ -2.1
RFX7Q2KHR2 TRGVB-201ENST00000453257 471 ntBASIC1.93□□□□□ -2.1
RFX7Q2KHR2 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC1.93□□□□□ -2.1
RFX7Q2KHR2 AC034222.1-201ENST00000494052 532 ntBASIC1.93□□□□□ -2.1
RFX7Q2KHR2 RPS27P26-201ENST00000494583 239 ntBASIC1.93□□□□□ -2.1
RFX7Q2KHR2 RNF138P1-201ENST00000502765 546 ntBASIC1.93□□□□□ -2.1
RFX7Q2KHR2 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC1.93□□□□□ -2.1
RFX7Q2KHR2 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC1.93□□□□□ -2.1
RFX7Q2KHR2 OR4P1P-201ENST00000530808 1136 ntBASIC1.93□□□□□ -2.1
RFX7Q2KHR2 SNRPGP16-201ENST00000533275 226 ntBASIC1.93□□□□□ -2.1
RFX7Q2KHR2 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC1.93□□□□□ -2.1
RFX7Q2KHR2 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC1.93□□□□□ -2.1
RFX7Q2KHR2 MTCO1P40-201ENST00000574371 625 ntBASIC1.93□□□□□ -2.1
RFX7Q2KHR2 AC103987.3-201ENST00000582071 292 ntBASIC1.93□□□□□ -2.1
RFX7Q2KHR2 AP005137.2-201ENST00000609238 400 ntBASIC1.93□□□□□ -2.1
RFX7Q2KHR2 AC110792.4-201ENST00000609843 298 ntBASIC1.93□□□□□ -2.1
RFX7Q2KHR2 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC1.93□□□□□ -2.1
RFX7Q2KHR2 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
RFX7Q2KHR2 MIR518E-201ENST00000385252 88 ntBASIC1.92□□□□□ -2.1
RFX7Q2KHR2 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC1.92□□□□□ -2.1
RFX7Q2KHR2 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
RFX7Q2KHR2 RNU2-68P-201ENST00000410878 191 ntBASIC1.92□□□□□ -2.1
RFX7Q2KHR2 TATDN1P1-201ENST00000414123 891 ntBASIC1.92□□□□□ -2.1
RFX7Q2KHR2 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
RFX7Q2KHR2 AC107398.1-201ENST00000486904 505 ntBASIC1.92□□□□□ -2.1
RFX7Q2KHR2 AC140059.1-201ENST00000489238 361 ntBASIC1.92□□□□□ -2.1
RFX7Q2KHR2 PCNAP1-201ENST00000505363 709 ntBASIC1.92□□□□□ -2.1
RFX7Q2KHR2 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC1.92□□□□□ -2.1
RFX7Q2KHR2 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.92□□□□□ -2.1
RFX7Q2KHR2 HSPE1P3-201ENST00000559254 309 ntBASIC1.92□□□□□ -2.1
RFX7Q2KHR2 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.92□□□□□ -2.1
RFX7Q2KHR2 MIR3122-201ENST00000577243 73 ntBASIC1.92□□□□□ -2.1
RFX7Q2KHR2 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.92□□□□□ -2.1
RFX7Q2KHR2 AC068944.2-201ENST00000610373 403 ntBASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms