Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 TTC39CP1-201ENST00000512513 755 ntBASIC2.74□□□□□ -1.97
CCNA1P78396 MRPS36P2-201ENST00000512569 299 ntBASIC2.74□□□□□ -1.97
CCNA1P78396 AC022861.1-201ENST00000522981 663 ntBASIC2.74□□□□□ -1.97
CCNA1P78396 ATP5F1P5-201ENST00000526403 760 ntBASIC2.74□□□□□ -1.97
CCNA1P78396 OR4R2P-201ENST00000530815 597 ntBASIC2.74□□□□□ -1.97
CCNA1P78396 AC123904.3-201ENST00000547218 814 ntBASIC2.74□□□□□ -1.97
CCNA1P78396 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC2.74□□□□□ -1.97
CCNA1P78396 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.74□□□□□ -1.97
CCNA1P78396 DEFB122-202ENST00000569013 197 ntBASIC2.74□□□□□ -1.97
CCNA1P78396 AC138915.2-201ENST00000569776 97 ntBASIC2.74□□□□□ -1.97
CCNA1P78396 AC090616.3-201ENST00000582184 217 ntBASIC2.74□□□□□ -1.97
CCNA1P78396 MIR3117-201ENST00000584034 78 ntBASIC2.74□□□□□ -1.97
CCNA1P78396 VN1R87P-201ENST00000596706 487 ntBASIC2.74□□□□□ -1.97
CCNA1P78396 AP001429.1-201ENST00000602568 530 ntBASIC2.74□□□□□ -1.97
CCNA1P78396 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CCNA1P78396 AC005332.6-201ENST00000613178 446 ntBASIC2.74□□□□□ -1.97
CCNA1P78396 AC009159.1-201ENST00000618386 642 ntBASIC2.74□□□□□ -1.97
CCNA1P78396 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC2.74□□□□□ -1.97
CCNA1P78396 MIR6873-201ENST00000622788 63 ntBASIC2.74□□□□□ -1.97
CCNA1P78396 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CCNA1P78396 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
CCNA1P78396 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.74□□□□□ -1.97
CCNA1P78396 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.74□□□□□ -1.97
CCNA1P78396 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.74□□□□□ -1.97
CCNA1P78396 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CCNA1P78396 Z82195.2-201ENST00000612348 18351 ntBASIC2.73□□□□□ -1.97
CCNA1P78396 CCT4P2-201ENST00000233836 1548 ntBASIC2.73□□□□□ -1.97
CCNA1P78396 PABPC1P9-201ENST00000426076 1612 ntBASIC2.73□□□□□ -1.97
CCNA1P78396 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
CCNA1P78396 FAM133CP-201ENST00000332869 704 ntBASIC2.73□□□□□ -1.97
CCNA1P78396 RNU6-216P-201ENST00000363282 104 ntBASIC2.73□□□□□ -1.97
CCNA1P78396 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
CCNA1P78396 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
CCNA1P78396 SNORA41-201ENST00000384675 132 ntBASIC2.73□□□□□ -1.97
CCNA1P78396 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.73□□□□□ -1.97
CCNA1P78396 AL096701.2-201ENST00000416920 238 ntBASIC2.73□□□□□ -1.97
CCNA1P78396 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC2.73□□□□□ -1.97
CCNA1P78396 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC2.73□□□□□ -1.97
CCNA1P78396 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.73□□□□□ -1.97
CCNA1P78396 MTCO2P17-201ENST00000424336 677 ntBASIC2.73□□□□□ -1.97
CCNA1P78396 SEPT7P5-201ENST00000434048 306 ntBASIC2.73□□□□□ -1.97
CCNA1P78396 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.73□□□□□ -1.97
CCNA1P78396 AL049734.2-201ENST00000441066 616 ntBASIC2.73□□□□□ -1.97
CCNA1P78396 PIGFP3-201ENST00000441918 722 ntBASIC2.73□□□□□ -1.97
CCNA1P78396 AC009961.3-201ENST00000449832 765 ntBASIC2.73□□□□□ -1.97
CCNA1P78396 RN7SL297P-201ENST00000483161 293 ntBASIC2.73□□□□□ -1.97
CCNA1P78396 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.73□□□□□ -1.97
CCNA1P78396 RPL23AP49-201ENST00000492925 468 ntBASIC2.73□□□□□ -1.97
CCNA1P78396 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.73□□□□□ -1.97
CCNA1P78396 AC114981.1-201ENST00000503897 678 ntBASIC2.73□□□□□ -1.97
CCNA1P78396 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC2.73□□□□□ -1.97
CCNA1P78396 NAMPTP2-201ENST00000505629 1115 ntBASIC2.73□□□□□ -1.97
CCNA1P78396 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC2.73□□□□□ -1.97
CCNA1P78396 SNORA31.22-201ENST00000517204 135 ntBASIC2.73□□□□□ -1.97
CCNA1P78396 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.73□□□□□ -1.97
CCNA1P78396 RANP3-201ENST00000530970 276 ntBASIC2.73□□□□□ -1.97
CCNA1P78396 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
CCNA1P78396 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC2.73□□□□□ -1.97
CCNA1P78396 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.73□□□□□ -1.97
CCNA1P78396 AC026464.5-201ENST00000562497 722 ntBASIC2.73□□□□□ -1.97
CCNA1P78396 AC009163.5-201ENST00000575421 637 ntBASIC2.73□□□□□ -1.97
CCNA1P78396 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC2.73□□□□□ -1.97
CCNA1P78396 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC2.73□□□□□ -1.97
CCNA1P78396 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
CCNA1P78396 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
CCNA1P78396 ATP8A2P3-201ENST00000426792 1536 ntBASIC2.73□□□□□ -1.97
CCNA1P78396 OR4G2P-202ENST00000641004 1759 ntBASIC2.72□□□□□ -1.97
CCNA1P78396 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
CCNA1P78396 RNU6-236P-201ENST00000363886 106 ntBASIC2.72□□□□□ -1.97
CCNA1P78396 RN7SKP226-201ENST00000364912 300 ntBASIC2.72□□□□□ -1.97
CCNA1P78396 RN7SKP140-201ENST00000411196 284 ntBASIC2.72□□□□□ -1.97
CCNA1P78396 AL513175.2-201ENST00000422071 443 ntBASIC2.72□□□□□ -1.97
CCNA1P78396 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.72□□□□□ -1.97
CCNA1P78396 MTCO1P3-201ENST00000429327 192 ntBASIC2.72□□□□□ -1.97
CCNA1P78396 Z80107.1-201ENST00000436830 412 ntBASIC2.72□□□□□ -1.97
CCNA1P78396 Z82210.1-201ENST00000440037 231 ntBASIC2.72□□□□□ -1.97
CCNA1P78396 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC2.72□□□□□ -1.97
CCNA1P78396 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC2.72□□□□□ -1.97
CCNA1P78396 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC2.72□□□□□ -1.97
CCNA1P78396 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.72□□□□□ -1.97
CCNA1P78396 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC2.72□□□□□ -1.97
CCNA1P78396 AC022634.1-201ENST00000520765 532 ntBASIC2.72□□□□□ -1.97
CCNA1P78396 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
CCNA1P78396 CYB5AP5-201ENST00000549779 389 ntBASIC2.72□□□□□ -1.97
CCNA1P78396 YWHAZP1-201ENST00000556286 722 ntBASIC2.72□□□□□ -1.97
CCNA1P78396 MTCO3P13-201ENST00000577757 781 ntBASIC2.72□□□□□ -1.97
CCNA1P78396 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC2.72□□□□□ -1.97
CCNA1P78396 MIR4446-201ENST00000578505 67 ntBASIC2.72□□□□□ -1.97
CCNA1P78396 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.72□□□□□ -1.97
CCNA1P78396 AC135507.1-201ENST00000607214 561 ntBASIC2.72□□□□□ -1.97
CCNA1P78396 AC008443.7-201ENST00000622195 246 ntBASIC2.72□□□□□ -1.97
CCNA1P78396 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.72□□□□□ -1.97
CCNA1P78396 MIR1322-201ENST00000638013 71 ntBASIC2.72□□□□□ -1.97
CCNA1P78396 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.72□□□□□ -1.97
CCNA1P78396 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.72□□□□□ -1.97
CCNA1P78396 AC006378.2-201ENST00000623178 2476 ntBASIC2.71□□□□□ -1.97
CCNA1P78396 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
CCNA1P78396 SNRPEP3-201ENST00000338402 276 ntBASIC2.71□□□□□ -1.98
CCNA1P78396 RNA5SP393-201ENST00000363423 117 ntBASIC2.71□□□□□ -1.98
CCNA1P78396 U3.20-201ENST00000390909 217 ntBASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 148.8 ms