Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 RPS29P11-201ENST00000496507 171 ntBASIC1.43□□□□□ -2.18
UBA52P62987 AC109471.1-201ENST00000511631 612 ntBASIC1.43□□□□□ -2.18
UBA52P62987 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.43□□□□□ -2.18
UBA52P62987 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC1.43□□□□□ -2.18
UBA52P62987 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC1.43□□□□□ -2.18
UBA52P62987 MIR548Y-201ENST00000582739 110 ntBASIC1.43□□□□□ -2.18
UBA52P62987 AC025165.5-201ENST00000602802 578 ntBASIC1.43□□□□□ -2.18
UBA52P62987 AL359821.1-201ENST00000605519 182 ntBASIC1.43□□□□□ -2.18
UBA52P62987 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC1.43□□□□□ -2.18
UBA52P62987 WWP1P1-201ENST00000466609 2769 ntBASIC1.42□□□□□ -2.18
UBA52P62987 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.42□□□□□ -2.18
UBA52P62987 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
UBA52P62987 OR1L1-202ENST00000373686 1083 ntBASIC1.42□□□□□ -2.18
UBA52P62987 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
UBA52P62987 RNA5SP56-201ENST00000410277 118 ntBASIC1.42□□□□□ -2.18
UBA52P62987 POLHP1-201ENST00000411806 470 ntBASIC1.42□□□□□ -2.18
UBA52P62987 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC1.42□□□□□ -2.18
UBA52P62987 AP1B1P2-201ENST00000416196 106 ntBASIC1.42□□□□□ -2.18
UBA52P62987 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC1.42□□□□□ -2.18
UBA52P62987 RPL7L1P10-201ENST00000427790 463 ntBASIC1.42□□□□□ -2.18
UBA52P62987 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC1.42□□□□□ -2.18
UBA52P62987 AL627224.1-201ENST00000448334 444 ntBASIC1.42□□□□□ -2.18
UBA52P62987 RPS15AP27-201ENST00000449183 343 ntBASIC1.42□□□□□ -2.18
UBA52P62987 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC1.42□□□□□ -2.18
UBA52P62987 AC132942.1-201ENST00000486753 483 ntBASIC1.42□□□□□ -2.18
UBA52P62987 AC023141.11-201ENST00000508864 202 ntBASIC1.42□□□□□ -2.18
UBA52P62987 AC108078.2-201ENST00000510750 236 ntBASIC1.42□□□□□ -2.18
UBA52P62987 MRPS36P2-201ENST00000512569 299 ntBASIC1.42□□□□□ -2.18
UBA52P62987 PRELID3BP4-201ENST00000515476 571 ntBASIC1.42□□□□□ -2.18
UBA52P62987 AC090888.1-201ENST00000561335 1141 ntBASIC1.42□□□□□ -2.18
UBA52P62987 SUB1P3-201ENST00000564581 315 ntBASIC1.42□□□□□ -2.18
UBA52P62987 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.42□□□□□ -2.18
UBA52P62987 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC1.42□□□□□ -2.18
UBA52P62987 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC1.42□□□□□ -2.18
UBA52P62987 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC1.42□□□□□ -2.18
UBA52P62987 AC078899.2-201ENST00000595282 212 ntBASIC1.42□□□□□ -2.18
UBA52P62987 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC1.42□□□□□ -2.18
UBA52P62987 AC135507.1-201ENST00000607214 561 ntBASIC1.42□□□□□ -2.18
UBA52P62987 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
UBA52P62987 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
UBA52P62987 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
UBA52P62987 RNU4-78P-201ENST00000410940 126 ntBASIC1.41□□□□□ -2.18
UBA52P62987 FCF1P2-201ENST00000415284 583 ntBASIC1.41□□□□□ -2.18
UBA52P62987 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.41□□□□□ -2.18
UBA52P62987 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.41□□□□□ -2.18
UBA52P62987 ARPC3P1-201ENST00000437218 533 ntBASIC1.41□□□□□ -2.18
UBA52P62987 AC092473.1-201ENST00000441098 221 ntBASIC1.41□□□□□ -2.18
UBA52P62987 AL500527.1-201ENST00000448532 255 ntBASIC1.41□□□□□ -2.18
UBA52P62987 KLF3P2-201ENST00000465138 268 ntBASIC1.41□□□□□ -2.18
UBA52P62987 AC005840.1-201ENST00000498412 377 ntBASIC1.41□□□□□ -2.18
UBA52P62987 MTCYBP17-201ENST00000503579 789 ntBASIC1.41□□□□□ -2.18
UBA52P62987 TRMT112P2-201ENST00000512910 132 ntBASIC1.41□□□□□ -2.18
UBA52P62987 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC1.41□□□□□ -2.18
UBA52P62987 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC1.41□□□□□ -2.18
UBA52P62987 SNORA31.25-201ENST00000517242 134 ntBASIC1.41□□□□□ -2.18
UBA52P62987 IGKV2D-36-201ENST00000518643 226 ntBASIC1.41□□□□□ -2.18
UBA52P62987 EIF4EP5-201ENST00000528228 640 ntBASIC1.41□□□□□ -2.18
UBA52P62987 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC1.41□□□□□ -2.18
UBA52P62987 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC1.41□□□□□ -2.18
UBA52P62987 AC104581.2-201ENST00000572227 430 ntBASIC1.41□□□□□ -2.18
UBA52P62987 MIR4255-201ENST00000579351 72 ntBASIC1.41□□□□□ -2.18
UBA52P62987 MIR4303-201ENST00000581299 66 ntBASIC1.41□□□□□ -2.18
UBA52P62987 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC1.41□□□□□ -2.18
UBA52P62987 AL669831.4-202ENST00000590817 238 ntBASIC1.41□□□□□ -2.18
UBA52P62987 AC040174.2-201ENST00000602701 465 ntBASIC1.41□□□□□ -2.18
UBA52P62987 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC1.41□□□□□ -2.18
UBA52P62987 AC103710.4-201ENST00000609301 899 ntBASIC1.41□□□□□ -2.18
UBA52P62987 ATP8A2P2-201ENST00000437678 1568 ntBASIC1.41□□□□□ -2.18
UBA52P62987 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.4□□□□□ -2.18
UBA52P62987 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC1.4□□□□□ -2.19
UBA52P62987 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC1.4□□□□□ -2.19
UBA52P62987 MIR767-201ENST00000390228 109 ntBASIC1.4□□□□□ -2.19
UBA52P62987 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
UBA52P62987 AC068050.1-201ENST00000394891 380 ntBASIC1.4□□□□□ -2.19
UBA52P62987 AL512604.1-201ENST00000404812 257 ntBASIC1.4□□□□□ -2.19
UBA52P62987 HMGB3P31-201ENST00000413333 595 ntBASIC1.4□□□□□ -2.19
UBA52P62987 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.4□□□□□ -2.19
UBA52P62987 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC1.4□□□□□ -2.19
UBA52P62987 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.4□□□□□ -2.19
UBA52P62987 MTCO1P42-201ENST00000457379 726 ntBASIC1.4□□□□□ -2.19
UBA52P62987 AC096751.1-202ENST00000502691 1067 ntBASIC1.4□□□□□ -2.19
UBA52P62987 RNU6-1004P-201ENST00000516584 111 ntBASIC1.4□□□□□ -2.19
UBA52P62987 CBX3P4-201ENST00000538909 354 ntBASIC1.4□□□□□ -2.19
UBA52P62987 AC011611.5-201ENST00000552477 578 ntBASIC1.4□□□□□ -2.19
UBA52P62987 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.4□□□□□ -2.19
UBA52P62987 OR4K8P-201ENST00000578842 1048 ntBASIC1.4□□□□□ -2.19
UBA52P62987 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC1.4□□□□□ -2.19
UBA52P62987 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
UBA52P62987 AC073592.7-201ENST00000623659 507 ntBASIC1.4□□□□□ -2.19
UBA52P62987 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC1.4□□□□□ -2.19
UBA52P62987 BX649567.1-201ENST00000642071 1134 ntBASIC1.4□□□□□ -2.19
UBA52P62987 MTND4P31-201ENST00000425607 1343 ntBASIC1.4□□□□□ -2.19
UBA52P62987 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC1.39□□□□□ -2.19
UBA52P62987 AP000648.3-201ENST00000623539 4507 ntBASIC1.39□□□□□ -2.19
UBA52P62987 RNA5SP258-201ENST00000362750 119 ntBASIC1.39□□□□□ -2.19
UBA52P62987 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
UBA52P62987 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC1.39□□□□□ -2.19
UBA52P62987 RPL23AP39-201ENST00000415533 405 ntBASIC1.39□□□□□ -2.19
UBA52P62987 AL358453.1-201ENST00000422522 250 ntBASIC1.39□□□□□ -2.19
UBA52P62987 AC098614.2-201ENST00000426040 255 ntBASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 138.6 ms