Protein–RNA interactions for Protein: P62684

HERVK_113, Endogenous retrovirus group K member 113 Gag polyprotein, humanhuman

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113P62684 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
HERVK_113P62684 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
HERVK_113P62684 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HERVK_113P62684 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
HERVK_113P62684 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.57□□□□□ -1.68
HERVK_113P62684 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
HERVK_113P62684 Z73965.1-201ENST00000623412 2297 ntBASIC4.57□□□□□ -1.68
HERVK_113P62684 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
HERVK_113P62684 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
HERVK_113P62684 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
HERVK_113P62684 RNU6-552P-201ENST00000362869 119 ntBASIC4.57□□□□□ -1.68
HERVK_113P62684 RNA5SP97-201ENST00000365006 84 ntBASIC4.57□□□□□ -1.68
HERVK_113P62684 RNU6-821P-201ENST00000390995 107 ntBASIC4.57□□□□□ -1.68
HERVK_113P62684 RPL21P17-201ENST00000397467 475 ntBASIC4.57□□□□□ -1.68
HERVK_113P62684 MIR1302-11-201ENST00000408051 138 ntBASIC4.57□□□□□ -1.68
HERVK_113P62684 MIR1302-9-201ENST00000408365 138 ntBASIC4.57□□□□□ -1.68
HERVK_113P62684 MIR1302-10-201ENST00000408734 138 ntBASIC4.57□□□□□ -1.68
HERVK_113P62684 RNU4-78P-201ENST00000410940 126 ntBASIC4.57□□□□□ -1.68
HERVK_113P62684 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC4.57□□□□□ -1.68
HERVK_113P62684 AC092447.6-201ENST00000414578 210 ntBASIC4.57□□□□□ -1.68
HERVK_113P62684 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC4.57□□□□□ -1.68
HERVK_113P62684 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
HERVK_113P62684 AL590639.1-201ENST00000456484 337 ntBASIC4.57□□□□□ -1.68
HERVK_113P62684 PPP1R2P5-201ENST00000457256 603 ntBASIC4.57□□□□□ -1.68
HERVK_113P62684 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC4.57□□□□□ -1.68
HERVK_113P62684 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.57□□□□□ -1.68
HERVK_113P62684 AC092436.1-201ENST00000506450 503 ntBASIC4.57□□□□□ -1.68
HERVK_113P62684 MTCO3P9-201ENST00000506989 781 ntBASIC4.57□□□□□ -1.68
HERVK_113P62684 TTC39CP1-201ENST00000512513 755 ntBASIC4.57□□□□□ -1.68
HERVK_113P62684 RNU6-277P-201ENST00000516272 106 ntBASIC4.57□□□□□ -1.68
HERVK_113P62684 RN7SKP234-201ENST00000517173 224 ntBASIC4.57□□□□□ -1.68
HERVK_113P62684 AF186190.1-201ENST00000517470 480 ntBASIC4.57□□□□□ -1.68
HERVK_113P62684 HMGN1P28-201ENST00000521340 364 ntBASIC4.57□□□□□ -1.68
HERVK_113P62684 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
HERVK_113P62684 NCAPGP2-201ENST00000557911 754 ntBASIC4.57□□□□□ -1.68
HERVK_113P62684 MIR4775-201ENST00000581168 75 ntBASIC4.57□□□□□ -1.68
HERVK_113P62684 AC010928.3-201ENST00000587712 541 ntBASIC4.57□□□□□ -1.68
HERVK_113P62684 AC005498.1-201ENST00000592125 465 ntBASIC4.57□□□□□ -1.68
HERVK_113P62684 MIR1302-2-201ENST00000607096 138 ntBASIC4.57□□□□□ -1.68
HERVK_113P62684 AC019176.2-201ENST00000611579 315 ntBASIC4.57□□□□□ -1.68
HERVK_113P62684 AL391261.4-201ENST00000616012 481 ntBASIC4.57□□□□□ -1.68
HERVK_113P62684 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.57□□□□□ -1.68
HERVK_113P62684 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
HERVK_113P62684 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
HERVK_113P62684 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.57□□□□□ -1.68
HERVK_113P62684 AC004972.1-201ENST00000623934 2209 ntBASIC4.57□□□□□ -1.68
HERVK_113P62684 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
HERVK_113P62684 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.56□□□□□ -1.68
HERVK_113P62684 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4.56□□□□□ -1.68
HERVK_113P62684 AC073343.1-201ENST00000328239 651 ntBASIC4.56□□□□□ -1.68
HERVK_113P62684 RNU6-179P-201ENST00000363350 107 ntBASIC4.56□□□□□ -1.68
HERVK_113P62684 Y_RNA.184-201ENST00000363884 108 ntBASIC4.56□□□□□ -1.68
HERVK_113P62684 RNU6-188P-201ENST00000364207 107 ntBASIC4.56□□□□□ -1.68
HERVK_113P62684 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
HERVK_113P62684 RNU6-637P-201ENST00000384050 107 ntBASIC4.56□□□□□ -1.68
HERVK_113P62684 RNU6-903P-201ENST00000391270 109 ntBASIC4.56□□□□□ -1.68
HERVK_113P62684 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
HERVK_113P62684 SYF2P2-201ENST00000417620 583 ntBASIC4.56□□□□□ -1.68
HERVK_113P62684 AC068533.1-201ENST00000418542 415 ntBASIC4.56□□□□□ -1.68
HERVK_113P62684 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.56□□□□□ -1.68
HERVK_113P62684 AL645937.1-202ENST00000421799 937 ntBASIC4.56□□□□□ -1.68
HERVK_113P62684 RPL35AP22-201ENST00000436855 335 ntBASIC4.56□□□□□ -1.68
HERVK_113P62684 AC016696.1-201ENST00000446949 318 ntBASIC4.56□□□□□ -1.68
HERVK_113P62684 AC010655.1-201ENST00000449336 292 ntBASIC4.56□□□□□ -1.68
HERVK_113P62684 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.56□□□□□ -1.68
HERVK_113P62684 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC4.56□□□□□ -1.68
HERVK_113P62684 SNORA19.2-201ENST00000516013 114 ntBASIC4.56□□□□□ -1.68
HERVK_113P62684 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.56□□□□□ -1.68
HERVK_113P62684 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC4.56□□□□□ -1.68
HERVK_113P62684 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC4.56□□□□□ -1.68
HERVK_113P62684 DEFB108D-201ENST00000527787 222 ntBASIC4.56□□□□□ -1.68
HERVK_113P62684 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC4.56□□□□□ -1.68
HERVK_113P62684 PSMA3P-201ENST00000555485 635 ntBASIC4.56□□□□□ -1.68
HERVK_113P62684 AC026464.5-201ENST00000562497 722 ntBASIC4.56□□□□□ -1.68
HERVK_113P62684 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC4.56□□□□□ -1.68
HERVK_113P62684 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC4.56□□□□□ -1.68
HERVK_113P62684 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC4.56□□□□□ -1.68
HERVK_113P62684 AC104237.2-201ENST00000612456 443 ntBASIC4.56□□□□□ -1.68
HERVK_113P62684 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC4.56□□□□□ -1.68
HERVK_113P62684 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
HERVK_113P62684 AC018555.1-201ENST00000567548 1980 ntBASIC4.56□□□□□ -1.68
HERVK_113P62684 AC027287.1-201ENST00000553115 1453 ntBASIC4.56□□□□□ -1.68
HERVK_113P62684 AL139811.1-201ENST00000424779 2299 ntBASIC4.55□□□□□ -1.68
HERVK_113P62684 TAB3P1-202ENST00000452645 1634 ntBASIC4.55□□□□□ -1.68
HERVK_113P62684 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC4.55□□□□□ -1.68
HERVK_113P62684 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.55□□□□□ -1.68
HERVK_113P62684 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.55□□□□□ -1.68
HERVK_113P62684 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
HERVK_113P62684 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
HERVK_113P62684 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
HERVK_113P62684 U1.1-201ENST00000384101 164 ntBASIC4.55□□□□□ -1.68
HERVK_113P62684 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC4.55□□□□□ -1.68
HERVK_113P62684 UBE2FP1-201ENST00000416536 447 ntBASIC4.55□□□□□ -1.68
HERVK_113P62684 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.55□□□□□ -1.68
HERVK_113P62684 HMGB1P18-201ENST00000438801 619 ntBASIC4.55□□□□□ -1.68
HERVK_113P62684 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.55□□□□□ -1.68
HERVK_113P62684 AL162395.1-201ENST00000457882 422 ntBASIC4.55□□□□□ -1.68
HERVK_113P62684 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.55□□□□□ -1.68
HERVK_113P62684 snoU109.4-201ENST00000458953 143 ntBASIC4.55□□□□□ -1.68
HERVK_113P62684 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 141.6 ms