Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
GFRA1P56159 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.28□□□□□ -1.72
GFRA1P56159 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
GFRA1P56159 AL590240.1-201ENST00000334118 313 ntBASIC4.28□□□□□ -1.72
GFRA1P56159 Y_RNA.324-201ENST00000365165 102 ntBASIC4.28□□□□□ -1.72
GFRA1P56159 Y_RNA.404-201ENST00000383978 102 ntBASIC4.28□□□□□ -1.72
GFRA1P56159 Y_RNA.473-201ENST00000384333 102 ntBASIC4.28□□□□□ -1.72
GFRA1P56159 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
GFRA1P56159 RNU2-3P-201ENST00000410144 191 ntBASIC4.28□□□□□ -1.72
GFRA1P56159 RNU6-1025P-201ENST00000410629 104 ntBASIC4.28□□□□□ -1.72
GFRA1P56159 USMG5P1-201ENST00000425964 177 ntBASIC4.28□□□□□ -1.72
GFRA1P56159 MTND3P2-201ENST00000438452 342 ntBASIC4.28□□□□□ -1.72
GFRA1P56159 AC011753.3-201ENST00000443436 406 ntBASIC4.28□□□□□ -1.72
GFRA1P56159 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.28□□□□□ -1.72
GFRA1P56159 DHFRP3-201ENST00000455595 559 ntBASIC4.28□□□□□ -1.72
GFRA1P56159 RPS29P33-201ENST00000456717 146 ntBASIC4.28□□□□□ -1.72
GFRA1P56159 AC022493.1-201ENST00000492984 337 ntBASIC4.28□□□□□ -1.72
GFRA1P56159 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC4.28□□□□□ -1.72
GFRA1P56159 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC4.28□□□□□ -1.72
GFRA1P56159 PTP4A1P4-201ENST00000512479 322 ntBASIC4.28□□□□□ -1.72
GFRA1P56159 MIR892C-201ENST00000516410 77 ntBASIC4.28□□□□□ -1.72
GFRA1P56159 RNA5SP290-201ENST00000517133 127 ntBASIC4.28□□□□□ -1.72
GFRA1P56159 RNA5SP291-201ENST00000517222 105 ntBASIC4.28□□□□□ -1.72
GFRA1P56159 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC4.28□□□□□ -1.72
GFRA1P56159 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
GFRA1P56159 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.28□□□□□ -1.72
GFRA1P56159 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC4.28□□□□□ -1.72
GFRA1P56159 AC104576.1-201ENST00000524225 88 ntBASIC4.28□□□□□ -1.72
GFRA1P56159 AP003122.3-201ENST00000526316 255 ntBASIC4.28□□□□□ -1.72
GFRA1P56159 AC084851.1-201ENST00000529105 249 ntBASIC4.28□□□□□ -1.72
GFRA1P56159 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.28□□□□□ -1.72
GFRA1P56159 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC4.28□□□□□ -1.72
GFRA1P56159 AC105129.1-201ENST00000560250 297 ntBASIC4.28□□□□□ -1.72
GFRA1P56159 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC4.28□□□□□ -1.72
GFRA1P56159 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.28□□□□□ -1.72
GFRA1P56159 AC234771.5-201ENST00000600161 514 ntBASIC4.28□□□□□ -1.72
GFRA1P56159 RMST_4.1-201ENST00000616886 107 ntBASIC4.28□□□□□ -1.72
GFRA1P56159 AC112200.1-201ENST00000625015 234 ntBASIC4.28□□□□□ -1.72
GFRA1P56159 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.28□□□□□ -1.72
GFRA1P56159 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
GFRA1P56159 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
GFRA1P56159 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.72
GFRA1P56159 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
GFRA1P56159 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.28□□□□□ -1.72
GFRA1P56159 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
GFRA1P56159 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.73
GFRA1P56159 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
GFRA1P56159 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.27□□□□□ -1.73
GFRA1P56159 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.27□□□□□ -1.73
GFRA1P56159 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.27□□□□□ -1.73
GFRA1P56159 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
GFRA1P56159 MTND5P16-201ENST00000460269 1703 ntBASIC4.27□□□□□ -1.73
GFRA1P56159 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC4.27□□□□□ -1.73
GFRA1P56159 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
GFRA1P56159 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
GFRA1P56159 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.27□□□□□ -1.73
GFRA1P56159 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
GFRA1P56159 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
GFRA1P56159 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
GFRA1P56159 Y_RNA.2-201ENST00000362330 96 ntBASIC4.27□□□□□ -1.73
GFRA1P56159 Y_RNA.5-201ENST00000362334 102 ntBASIC4.27□□□□□ -1.73
GFRA1P56159 RN7SKP115-201ENST00000363177 317 ntBASIC4.27□□□□□ -1.73
GFRA1P56159 RNU6-741P-201ENST00000383889 107 ntBASIC4.27□□□□□ -1.73
GFRA1P56159 RNU1-82P-201ENST00000390851 165 ntBASIC4.27□□□□□ -1.73
GFRA1P56159 AL590762.2-201ENST00000395798 571 ntBASIC4.27□□□□□ -1.73
GFRA1P56159 RPS16P5-201ENST00000406501 404 ntBASIC4.27□□□□□ -1.73
GFRA1P56159 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC4.27□□□□□ -1.73
GFRA1P56159 CYCSP33-201ENST00000414485 327 ntBASIC4.27□□□□□ -1.73
GFRA1P56159 Z85995.1-201ENST00000415547 335 ntBASIC4.27□□□□□ -1.73
GFRA1P56159 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC4.27□□□□□ -1.73
GFRA1P56159 UBE2D3P2-201ENST00000424409 445 ntBASIC4.27□□□□□ -1.73
GFRA1P56159 AC007919.1-201ENST00000429380 217 ntBASIC4.27□□□□□ -1.73
GFRA1P56159 AC068287.1-201ENST00000430283 295 ntBASIC4.27□□□□□ -1.73
GFRA1P56159 USP9YP30-201ENST00000430729 455 ntBASIC4.27□□□□□ -1.73
GFRA1P56159 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.27□□□□□ -1.73
GFRA1P56159 USP9YP7-201ENST00000436723 430 ntBASIC4.27□□□□□ -1.73
GFRA1P56159 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC4.27□□□□□ -1.73
GFRA1P56159 USP9YP32-201ENST00000452432 430 ntBASIC4.27□□□□□ -1.73
GFRA1P56159 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.27□□□□□ -1.73
GFRA1P56159 AC079168.2-201ENST00000453977 416 ntBASIC4.27□□□□□ -1.73
GFRA1P56159 RNU7-187P-201ENST00000458985 68 ntBASIC4.27□□□□□ -1.73
GFRA1P56159 RPL12P20-201ENST00000475538 479 ntBASIC4.27□□□□□ -1.73
GFRA1P56159 AC008897.1-201ENST00000494006 347 ntBASIC4.27□□□□□ -1.73
GFRA1P56159 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.27□□□□□ -1.73
GFRA1P56159 AC007016.1-201ENST00000512110 244 ntBASIC4.27□□□□□ -1.73
GFRA1P56159 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC4.27□□□□□ -1.73
GFRA1P56159 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.27□□□□□ -1.73
GFRA1P56159 TRAV37-201ENST00000553906 342 ntBASIC4.27□□□□□ -1.73
GFRA1P56159 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC4.27□□□□□ -1.73
GFRA1P56159 MIR4330-201ENST00000579077 105 ntBASIC4.27□□□□□ -1.73
GFRA1P56159 AC011494.1-201ENST00000596454 237 ntBASIC4.27□□□□□ -1.73
GFRA1P56159 uc_338.18-201ENST00000615451 175 ntBASIC4.27□□□□□ -1.73
GFRA1P56159 AC091925.1-201ENST00000623204 462 ntBASIC4.27□□□□□ -1.73
GFRA1P56159 AL078596.1-201ENST00000624856 447 ntBASIC4.27□□□□□ -1.73
GFRA1P56159 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC4.27□□□□□ -1.73
GFRA1P56159 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
GFRA1P56159 NOL8P1-201ENST00000508336 3529 ntBASIC4.27□□□□□ -1.73
GFRA1P56159 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.27□□□□□ -1.73
GFRA1P56159 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.27□□□□□ -1.73
GFRA1P56159 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms