Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.9□□□□□ -1.79
COPB1P53618 AC137499.1-201ENST00000427602 88 ntBASIC3.9□□□□□ -1.79
COPB1P53618 AC017083.1-201ENST00000428093 483 ntBASIC3.9□□□□□ -1.79
COPB1P53618 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC3.9□□□□□ -1.79
COPB1P53618 HMGB3P12-201ENST00000438745 556 ntBASIC3.9□□□□□ -1.79
COPB1P53618 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.9□□□□□ -1.79
COPB1P53618 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC3.9□□□□□ -1.79
COPB1P53618 SNRPEP8-201ENST00000442866 260 ntBASIC3.9□□□□□ -1.79
COPB1P53618 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
COPB1P53618 AL590399.6-201ENST00000446396 307 ntBASIC3.9□□□□□ -1.79
COPB1P53618 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.9□□□□□ -1.79
COPB1P53618 AC007967.1-201ENST00000455422 1159 ntBASIC3.9□□□□□ -1.79
COPB1P53618 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC3.9□□□□□ -1.79
COPB1P53618 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC3.9□□□□□ -1.79
COPB1P53618 snoU13.3-201ENST00000459441 104 ntBASIC3.9□□□□□ -1.79
COPB1P53618 AC110768.1-201ENST00000509222 400 ntBASIC3.9□□□□□ -1.79
COPB1P53618 AC098799.2-201ENST00000509466 868 ntBASIC3.9□□□□□ -1.79
COPB1P53618 AC114781.4-201ENST00000513707 639 ntBASIC3.9□□□□□ -1.79
COPB1P53618 SNORA70.14-201ENST00000516205 110 ntBASIC3.9□□□□□ -1.79
COPB1P53618 RNA5SP309-201ENST00000516670 106 ntBASIC3.9□□□□□ -1.79
COPB1P53618 RN7SKP116-201ENST00000516902 319 ntBASIC3.9□□□□□ -1.79
COPB1P53618 RNU6-1231P-201ENST00000517185 103 ntBASIC3.9□□□□□ -1.79
COPB1P53618 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
COPB1P53618 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.9□□□□□ -1.79
COPB1P53618 AP003385.6-201ENST00000531603 374 ntBASIC3.9□□□□□ -1.79
COPB1P53618 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC3.9□□□□□ -1.79
COPB1P53618 AC011602.1-201ENST00000546484 331 ntBASIC3.9□□□□□ -1.79
COPB1P53618 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC3.9□□□□□ -1.79
COPB1P53618 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.9□□□□□ -1.79
COPB1P53618 MIR4458-201ENST00000578872 75 ntBASIC3.9□□□□□ -1.79
COPB1P53618 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.9□□□□□ -1.79
COPB1P53618 AC112230.1-201ENST00000604342 547 ntBASIC3.9□□□□□ -1.79
COPB1P53618 AC007038.2-201ENST00000608095 740 ntBASIC3.9□□□□□ -1.79
COPB1P53618 AC069234.5-201ENST00000611056 416 ntBASIC3.9□□□□□ -1.79
COPB1P53618 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.9□□□□□ -1.79
COPB1P53618 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.9□□□□□ -1.79
COPB1P53618 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.9□□□□□ -1.79
COPB1P53618 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.9□□□□□ -1.79
COPB1P53618 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
COPB1P53618 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.9□□□□□ -1.79
COPB1P53618 TNPO1P3-201ENST00000436471 2662 ntBASIC3.89□□□□□ -1.79
COPB1P53618 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
COPB1P53618 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.89□□□□□ -1.79
COPB1P53618 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
COPB1P53618 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.89□□□□□ -1.79
COPB1P53618 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.89□□□□□ -1.79
COPB1P53618 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
COPB1P53618 RNY3P3-201ENST00000363816 102 ntBASIC3.89□□□□□ -1.79
COPB1P53618 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
COPB1P53618 MIR7-3-201ENST00000384898 110 ntBASIC3.89□□□□□ -1.79
COPB1P53618 MIR449B-201ENST00000384995 97 ntBASIC3.89□□□□□ -1.79
COPB1P53618 RNU6-876P-201ENST00000391295 104 ntBASIC3.89□□□□□ -1.79
COPB1P53618 HMGN1P24-201ENST00000412282 298 ntBASIC3.89□□□□□ -1.79
COPB1P53618 AC017079.2-201ENST00000416102 485 ntBASIC3.89□□□□□ -1.79
COPB1P53618 SNRPEP10-201ENST00000420249 274 ntBASIC3.89□□□□□ -1.79
COPB1P53618 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.89□□□□□ -1.79
COPB1P53618 GTF2IP20-201ENST00000431663 360 ntBASIC3.89□□□□□ -1.79
COPB1P53618 USP12PX-201ENST00000432383 1057 ntBASIC3.89□□□□□ -1.79
COPB1P53618 AL606489.2-201ENST00000433886 234 ntBASIC3.89□□□□□ -1.79
COPB1P53618 RPL23AP33-201ENST00000442301 452 ntBASIC3.89□□□□□ -1.79
COPB1P53618 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.89□□□□□ -1.79
COPB1P53618 RPS3AP46-201ENST00000448352 682 ntBASIC3.89□□□□□ -1.79
COPB1P53618 AL133547.1-201ENST00000448546 220 ntBASIC3.89□□□□□ -1.79
COPB1P53618 RPL29P29-201ENST00000448725 423 ntBASIC3.89□□□□□ -1.79
COPB1P53618 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.89□□□□□ -1.79
COPB1P53618 AC108059.3-201ENST00000456388 214 ntBASIC3.89□□□□□ -1.79
COPB1P53618 NDUFB4P9-201ENST00000511646 388 ntBASIC3.89□□□□□ -1.79
COPB1P53618 SNORA40.12-201ENST00000516329 111 ntBASIC3.89□□□□□ -1.79
COPB1P53618 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC3.89□□□□□ -1.79
COPB1P53618 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.89□□□□□ -1.79
COPB1P53618 AF235103.2-201ENST00000525753 346 ntBASIC3.89□□□□□ -1.79
COPB1P53618 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.89□□□□□ -1.79
COPB1P53618 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.89□□□□□ -1.79
COPB1P53618 HSPE1P5-201ENST00000561489 272 ntBASIC3.89□□□□□ -1.79
COPB1P53618 MIR4444-1-201ENST00000581696 74 ntBASIC3.89□□□□□ -1.79
COPB1P53618 MIR4444-2-201ENST00000584390 74 ntBASIC3.89□□□□□ -1.79
COPB1P53618 AC105224.1-201ENST00000587055 421 ntBASIC3.89□□□□□ -1.79
COPB1P53618 GLUD1P4-201ENST00000590914 418 ntBASIC3.89□□□□□ -1.79
COPB1P53618 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC3.89□□□□□ -1.79
COPB1P53618 C2orf27A-204ENST00000623058 969 ntBASIC3.89□□□□□ -1.79
COPB1P53618 CR392039.5-201ENST00000623201 510 ntBASIC3.89□□□□□ -1.79
COPB1P53618 ZNF680P1-201ENST00000436625 1469 ntBASIC3.89□□□□□ -1.79
COPB1P53618 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
COPB1P53618 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.89□□□□□ -1.79
COPB1P53618 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
COPB1P53618 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
COPB1P53618 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
COPB1P53618 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
COPB1P53618 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.88□□□□□ -1.79
COPB1P53618 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
COPB1P53618 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
COPB1P53618 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
COPB1P53618 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.88□□□□□ -1.79
COPB1P53618 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.88□□□□□ -1.79
COPB1P53618 PWAR6-201ENST00000552334 4618 ntBASIC3.88□□□□□ -1.79
COPB1P53618 RNU6-451P-201ENST00000362921 107 ntBASIC3.88□□□□□ -1.79
COPB1P53618 RNU6-511P-201ENST00000363496 107 ntBASIC3.88□□□□□ -1.79
COPB1P53618 RNU6-263P-201ENST00000363811 107 ntBASIC3.88□□□□□ -1.79
COPB1P53618 SNORD46.1-201ENST00000364139 104 ntBASIC3.88□□□□□ -1.79
COPB1P53618 RNU6-39P-201ENST00000384344 107 ntBASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms