Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 RNU6-306P-201ENST00000384617 107 ntBASIC5.11□□□□□ -1.59
USP11P51784 SNORD96B-201ENST00000386148 79 ntBASIC5.11□□□□□ -1.59
USP11P51784 ELOCP19-201ENST00000411919 318 ntBASIC5.11□□□□□ -1.59
USP11P51784 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC5.11□□□□□ -1.59
USP11P51784 AL356387.2-201ENST00000422272 243 ntBASIC5.11□□□□□ -1.59
USP11P51784 RPS12P5-201ENST00000423449 371 ntBASIC5.11□□□□□ -1.59
USP11P51784 MRPS18CP6-201ENST00000423587 223 ntBASIC5.11□□□□□ -1.59
USP11P51784 RPL23AP38-201ENST00000423801 469 ntBASIC5.11□□□□□ -1.59
USP11P51784 RPS12P10-201ENST00000427031 377 ntBASIC5.11□□□□□ -1.59
USP11P51784 USP9YP30-201ENST00000430729 455 ntBASIC5.11□□□□□ -1.59
USP11P51784 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC5.11□□□□□ -1.59
USP11P51784 RPS15AP10-201ENST00000432472 382 ntBASIC5.11□□□□□ -1.59
USP11P51784 AL353597.2-202ENST00000434901 373 ntBASIC5.11□□□□□ -1.59
USP11P51784 OSTCP8-201ENST00000445117 448 ntBASIC5.11□□□□□ -1.59
USP11P51784 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC5.11□□□□□ -1.59
USP11P51784 AL353752.1-201ENST00000454946 260 ntBASIC5.11□□□□□ -1.59
USP11P51784 SNORD5.1-201ENST00000458800 75 ntBASIC5.11□□□□□ -1.59
USP11P51784 AC053481.1-201ENST00000467217 306 ntBASIC5.11□□□□□ -1.59
USP11P51784 AC087884.1-201ENST00000469738 328 ntBASIC5.11□□□□□ -1.59
USP11P51784 AC022034.3-201ENST00000471393 478 ntBASIC5.11□□□□□ -1.59
USP11P51784 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC5.11□□□□□ -1.59
USP11P51784 RN7SL459P-201ENST00000481078 302 ntBASIC5.11□□□□□ -1.59
USP11P51784 FTH1P24-201ENST00000503502 462 ntBASIC5.11□□□□□ -1.59
USP11P51784 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC5.11□□□□□ -1.59
USP11P51784 RNU4ATAC10P-201ENST00000516967 122 ntBASIC5.11□□□□□ -1.59
USP11P51784 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC5.11□□□□□ -1.59
USP11P51784 MIR3941-201ENST00000582572 103 ntBASIC5.11□□□□□ -1.59
USP11P51784 AC125232.2-201ENST00000592457 143 ntBASIC5.11□□□□□ -1.59
USP11P51784 AC012603.1-201ENST00000606424 528 ntBASIC5.11□□□□□ -1.59
USP11P51784 AL355810.1-201ENST00000614629 552 ntBASIC5.11□□□□□ -1.59
USP11P51784 AC123768.4-201ENST00000616244 701 ntBASIC5.11□□□□□ -1.59
USP11P51784 BMS1P21-201ENST00000634565 365 ntBASIC5.11□□□□□ -1.59
USP11P51784 AL606534.2-204ENST00000635008 178 ntBASIC5.11□□□□□ -1.59
USP11P51784 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.11□□□□□ -1.59
USP11P51784 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
USP11P51784 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
USP11P51784 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
USP11P51784 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
USP11P51784 MFSD8-242ENST00000641690 4199 ntBASIC5.11□□□□□ -1.59
USP11P51784 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
USP11P51784 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5.1□□□□□ -1.59
USP11P51784 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC5.1□□□□□ -1.59
USP11P51784 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
USP11P51784 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
USP11P51784 RNU1-32P-201ENST00000363937 159 ntBASIC5.1□□□□□ -1.59
USP11P51784 Y_RNA.222-201ENST00000364264 102 ntBASIC5.1□□□□□ -1.59
USP11P51784 Y_RNA.288-201ENST00000364854 92 ntBASIC5.1□□□□□ -1.59
USP11P51784 RNA5SP151-201ENST00000365632 117 ntBASIC5.1□□□□□ -1.59
USP11P51784 Y_RNA.380-201ENST00000365663 111 ntBASIC5.1□□□□□ -1.59
USP11P51784 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC5.1□□□□□ -1.59
USP11P51784 RNU6-128P-201ENST00000383976 107 ntBASIC5.1□□□□□ -1.59
USP11P51784 RNU6-178P-201ENST00000384631 104 ntBASIC5.1□□□□□ -1.59
USP11P51784 MT-TW-201ENST00000387382 68 ntBASIC5.1□□□□□ -1.59
USP11P51784 RPL21P1-201ENST00000399532 476 ntBASIC5.1□□□□□ -1.59
USP11P51784 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
USP11P51784 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC5.1□□□□□ -1.59
USP11P51784 RNU6-387P-201ENST00000411331 105 ntBASIC5.1□□□□□ -1.59
USP11P51784 Z99755.1-201ENST00000414048 380 ntBASIC5.1□□□□□ -1.59
USP11P51784 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC5.1□□□□□ -1.59
USP11P51784 RPLP0P7-201ENST00000416050 667 ntBASIC5.1□□□□□ -1.59
USP11P51784 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC5.1□□□□□ -1.59
USP11P51784 USMG5P1-201ENST00000425964 177 ntBASIC5.1□□□□□ -1.59
USP11P51784 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC5.1□□□□□ -1.59
USP11P51784 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC5.1□□□□□ -1.59
USP11P51784 RPL36AP13-201ENST00000457490 317 ntBASIC5.1□□□□□ -1.59
USP11P51784 RNU6-1132P-201ENST00000459214 107 ntBASIC5.1□□□□□ -1.59
USP11P51784 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
USP11P51784 RPL23AP65-201ENST00000475608 468 ntBASIC5.1□□□□□ -1.59
USP11P51784 AC135721.1-201ENST00000497954 479 ntBASIC5.1□□□□□ -1.59
USP11P51784 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC5.1□□□□□ -1.59
USP11P51784 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC5.1□□□□□ -1.59
USP11P51784 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
USP11P51784 IGHVIII-2-1-201ENST00000518843 291 ntBASIC5.1□□□□□ -1.59
USP11P51784 RPL7P50-201ENST00000600588 727 ntBASIC5.1□□□□□ -1.59
USP11P51784 AC068790.4-201ENST00000602474 263 ntBASIC5.1□□□□□ -1.59
USP11P51784 LINC01109-201ENST00000603837 3081 ntBASIC5.1□□□□□ -1.59
USP11P51784 AC009570.1-201ENST00000609599 745 ntBASIC5.1□□□□□ -1.59
USP11P51784 MIR6891-201ENST00000618788 93 ntBASIC5.1□□□□□ -1.59
USP11P51784 AC141273.2-201ENST00000618989 130 ntBASIC5.1□□□□□ -1.59
USP11P51784 AC091905.2-201ENST00000623143 306 ntBASIC5.1□□□□□ -1.59
USP11P51784 AC243312.2-201ENST00000623340 601 ntBASIC5.1□□□□□ -1.59
USP11P51784 BCLAF1P2-201ENST00000624956 2609 ntBASIC5.1□□□□□ -1.59
USP11P51784 AL672167.1-203ENST00000641299 2975 ntBASIC5.1□□□□□ -1.59
USP11P51784 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.1□□□□□ -1.59
USP11P51784 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
USP11P51784 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC5.1□□□□□ -1.59
USP11P51784 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
USP11P51784 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
USP11P51784 AC233263.6-201ENST00000631132 1963 ntBASIC5.09□□□□□ -1.59
USP11P51784 AC139769.1-204ENST00000472297 1931 ntBASIC5.09□□□□□ -1.59
USP11P51784 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
USP11P51784 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC5.09□□□□□ -1.59
USP11P51784 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
USP11P51784 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
USP11P51784 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
USP11P51784 RNU6-1059P-201ENST00000363752 98 ntBASIC5.09□□□□□ -1.59
USP11P51784 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
USP11P51784 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC5.09□□□□□ -1.59
USP11P51784 DNAJC19P7-201ENST00000428811 344 ntBASIC5.09□□□□□ -1.59
USP11P51784 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms