Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.16□□□□□ -1.9
SLC6A12P48065 TXNP6-201ENST00000510190 310 ntBASIC3.16□□□□□ -1.9
SLC6A12P48065 AC109464.2-201ENST00000510242 943 ntBASIC3.16□□□□□ -1.9
SLC6A12P48065 AC022483.1-201ENST00000514020 567 ntBASIC3.16□□□□□ -1.9
SLC6A12P48065 SNORD59.2-201ENST00000516873 68 ntBASIC3.16□□□□□ -1.9
SLC6A12P48065 MTND1P5-201ENST00000517906 940 ntBASIC3.16□□□□□ -1.9
SLC6A12P48065 DEFB108D-201ENST00000527787 222 ntBASIC3.16□□□□□ -1.9
SLC6A12P48065 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
SLC6A12P48065 AP002453.2-201ENST00000533503 320 ntBASIC3.16□□□□□ -1.9
SLC6A12P48065 MIR3913-1-201ENST00000577744 102 ntBASIC3.16□□□□□ -1.9
SLC6A12P48065 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.16□□□□□ -1.9
SLC6A12P48065 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC3.16□□□□□ -1.9
SLC6A12P48065 AC008498.1-201ENST00000613012 531 ntBASIC3.16□□□□□ -1.9
SLC6A12P48065 MIR6076-201ENST00000617521 113 ntBASIC3.16□□□□□ -1.9
SLC6A12P48065 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.16□□□□□ -1.9
SLC6A12P48065 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.16□□□□□ -1.9
SLC6A12P48065 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.16□□□□□ -1.9
SLC6A12P48065 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.16□□□□□ -1.9
SLC6A12P48065 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SLC6A12P48065 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.16□□□□□ -1.9
SLC6A12P48065 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
SLC6A12P48065 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
SLC6A12P48065 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
SLC6A12P48065 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
SLC6A12P48065 Y_RNA.46-201ENST00000362695 102 ntBASIC3.15□□□□□ -1.91
SLC6A12P48065 RNA5SP387-201ENST00000364226 106 ntBASIC3.15□□□□□ -1.91
SLC6A12P48065 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
SLC6A12P48065 RNU6-1215P-201ENST00000384441 102 ntBASIC3.15□□□□□ -1.91
SLC6A12P48065 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
SLC6A12P48065 CCDC58P2-201ENST00000417131 366 ntBASIC3.15□□□□□ -1.91
SLC6A12P48065 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC3.15□□□□□ -1.91
SLC6A12P48065 USP9YP36-201ENST00000424581 829 ntBASIC3.15□□□□□ -1.91
SLC6A12P48065 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC3.15□□□□□ -1.91
SLC6A12P48065 MTND6P13-201ENST00000443510 523 ntBASIC3.15□□□□□ -1.91
SLC6A12P48065 NANOGNBP1-201ENST00000448444 480 ntBASIC3.15□□□□□ -1.91
SLC6A12P48065 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC3.15□□□□□ -1.91
SLC6A12P48065 AC115115.1-201ENST00000449927 248 ntBASIC3.15□□□□□ -1.91
SLC6A12P48065 CYCSP35-201ENST00000451978 304 ntBASIC3.15□□□□□ -1.91
SLC6A12P48065 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC3.15□□□□□ -1.91
SLC6A12P48065 SNRPFP4-201ENST00000456366 242 ntBASIC3.15□□□□□ -1.91
SLC6A12P48065 AL359385.1-201ENST00000456509 365 ntBASIC3.15□□□□□ -1.91
SLC6A12P48065 RPL23AP14-201ENST00000468281 468 ntBASIC3.15□□□□□ -1.91
SLC6A12P48065 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.15□□□□□ -1.91
SLC6A12P48065 AP001025.2-201ENST00000490908 477 ntBASIC3.15□□□□□ -1.91
SLC6A12P48065 AC138853.1-201ENST00000503549 823 ntBASIC3.15□□□□□ -1.91
SLC6A12P48065 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC3.15□□□□□ -1.91
SLC6A12P48065 SNORA31.1-201ENST00000515993 133 ntBASIC3.15□□□□□ -1.91
SLC6A12P48065 SNORA31.5-201ENST00000516190 133 ntBASIC3.15□□□□□ -1.91
SLC6A12P48065 SNORA64.4-201ENST00000516632 81 ntBASIC3.15□□□□□ -1.91
SLC6A12P48065 RNU6-714P-201ENST00000516963 103 ntBASIC3.15□□□□□ -1.91
SLC6A12P48065 AP003497.1-201ENST00000528472 562 ntBASIC3.15□□□□□ -1.91
SLC6A12P48065 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC3.15□□□□□ -1.91
SLC6A12P48065 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.15□□□□□ -1.91
SLC6A12P48065 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.15□□□□□ -1.91
SLC6A12P48065 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.15□□□□□ -1.91
SLC6A12P48065 AL157817.1-201ENST00000614264 790 ntBASIC3.15□□□□□ -1.91
SLC6A12P48065 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.15□□□□□ -1.91
SLC6A12P48065 AL590099.1-201ENST00000615276 138 ntBASIC3.15□□□□□ -1.91
SLC6A12P48065 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
SLC6A12P48065 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.15□□□□□ -1.91
SLC6A12P48065 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC3.15□□□□□ -1.91
SLC6A12P48065 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.15□□□□□ -1.91
SLC6A12P48065 AC092447.7-201ENST00000422212 1621 ntBASIC3.15□□□□□ -1.91
SLC6A12P48065 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.14□□□□□ -1.91
SLC6A12P48065 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
SLC6A12P48065 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
SLC6A12P48065 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.14□□□□□ -1.91
SLC6A12P48065 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
SLC6A12P48065 AC005832.2-201ENST00000538921 1430 ntBASIC3.14□□□□□ -1.91
SLC6A12P48065 AL161781.1-201ENST00000354277 403 ntBASIC3.14□□□□□ -1.91
SLC6A12P48065 SNORD56.3-201ENST00000363507 71 ntBASIC3.14□□□□□ -1.91
SLC6A12P48065 RNU6-853P-201ENST00000364306 107 ntBASIC3.14□□□□□ -1.91
SLC6A12P48065 Y_RNA.333-201ENST00000365274 102 ntBASIC3.14□□□□□ -1.91
SLC6A12P48065 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.14□□□□□ -1.91
SLC6A12P48065 SNORA1.3-201ENST00000384676 136 ntBASIC3.14□□□□□ -1.91
SLC6A12P48065 RNU1-101P-201ENST00000391171 127 ntBASIC3.14□□□□□ -1.91
SLC6A12P48065 RPS4XP3-201ENST00000398541 413 ntBASIC3.14□□□□□ -1.91
SLC6A12P48065 AL354719.1-201ENST00000406535 843 ntBASIC3.14□□□□□ -1.91
SLC6A12P48065 RNA5SP38-201ENST00000410750 119 ntBASIC3.14□□□□□ -1.91
SLC6A12P48065 AC078974.1-201ENST00000411597 223 ntBASIC3.14□□□□□ -1.91
SLC6A12P48065 RPS3AP3-201ENST00000411933 242 ntBASIC3.14□□□□□ -1.91
SLC6A12P48065 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.14□□□□□ -1.91
SLC6A12P48065 MRPL50P2-201ENST00000416821 482 ntBASIC3.14□□□□□ -1.91
SLC6A12P48065 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SLC6A12P48065 AC245291.1-201ENST00000419501 328 ntBASIC3.14□□□□□ -1.91
SLC6A12P48065 AC097713.2-201ENST00000430199 356 ntBASIC3.14□□□□□ -1.91
SLC6A12P48065 MTND1P4-201ENST00000435196 415 ntBASIC3.14□□□□□ -1.91
SLC6A12P48065 RPL23AP22-201ENST00000437556 453 ntBASIC3.14□□□□□ -1.91
SLC6A12P48065 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.14□□□□□ -1.91
SLC6A12P48065 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.14□□□□□ -1.91
SLC6A12P48065 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC3.14□□□□□ -1.91
SLC6A12P48065 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.14□□□□□ -1.91
SLC6A12P48065 AL033528.1-201ENST00000453780 140 ntBASIC3.14□□□□□ -1.91
SLC6A12P48065 AC234775.1-201ENST00000454247 670 ntBASIC3.14□□□□□ -1.91
SLC6A12P48065 snoU13.8-201ENST00000458890 104 ntBASIC3.14□□□□□ -1.91
SLC6A12P48065 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.14□□□□□ -1.91
SLC6A12P48065 AL358832.1-201ENST00000497800 389 ntBASIC3.14□□□□□ -1.91
SLC6A12P48065 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SLC6A12P48065 AL359273.1-201ENST00000510918 627 ntBASIC3.14□□□□□ -1.91
SLC6A12P48065 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 132.3 ms