Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 SNORD88.1-201ENST00000408684 91 ntBASIC2.31□□□□□ -2.04
CXCL12P48061 MTATP6P20-201ENST00000414147 562 ntBASIC2.31□□□□□ -2.04
CXCL12P48061 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.31□□□□□ -2.04
CXCL12P48061 AL513175.2-201ENST00000422071 443 ntBASIC2.31□□□□□ -2.04
CXCL12P48061 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.31□□□□□ -2.04
CXCL12P48061 MTCYBP45-201ENST00000435243 565 ntBASIC2.31□□□□□ -2.04
CXCL12P48061 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC2.31□□□□□ -2.04
CXCL12P48061 MUPP-201ENST00000438111 566 ntBASIC2.31□□□□□ -2.04
CXCL12P48061 AL645638.1-201ENST00000440519 361 ntBASIC2.31□□□□□ -2.04
CXCL12P48061 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.31□□□□□ -2.04
CXCL12P48061 AL353691.1-201ENST00000451332 387 ntBASIC2.31□□□□□ -2.04
CXCL12P48061 RPS29P12-201ENST00000460178 152 ntBASIC2.31□□□□□ -2.04
CXCL12P48061 AC005410.1-202ENST00000460347 485 ntBASIC2.31□□□□□ -2.04
CXCL12P48061 RPL23AP11-201ENST00000475260 469 ntBASIC2.31□□□□□ -2.04
CXCL12P48061 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC2.31□□□□□ -2.04
CXCL12P48061 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
CXCL12P48061 XKRY-201ENST00000510392 1100 ntBASIC2.31□□□□□ -2.04
CXCL12P48061 AC112673.1-201ENST00000513168 575 ntBASIC2.31□□□□□ -2.04
CXCL12P48061 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC2.31□□□□□ -2.04
CXCL12P48061 HSPA8P13-201ENST00000523715 472 ntBASIC2.31□□□□□ -2.04
CXCL12P48061 CR383656.7-201ENST00000548164 174 ntBASIC2.31□□□□□ -2.04
CXCL12P48061 MED28P6-201ENST00000558776 231 ntBASIC2.31□□□□□ -2.04
CXCL12P48061 AC105137.2-201ENST00000569073 466 ntBASIC2.31□□□□□ -2.04
CXCL12P48061 MTCO3P13-201ENST00000577757 781 ntBASIC2.31□□□□□ -2.04
CXCL12P48061 OR4K8P-201ENST00000578842 1048 ntBASIC2.31□□□□□ -2.04
CXCL12P48061 COX6CP3-201ENST00000580869 223 ntBASIC2.31□□□□□ -2.04
CXCL12P48061 BNIP3P26-201ENST00000600827 554 ntBASIC2.31□□□□□ -2.04
CXCL12P48061 AL022099.1-201ENST00000604551 712 ntBASIC2.31□□□□□ -2.04
CXCL12P48061 AC106900.2-201ENST00000604994 317 ntBASIC2.31□□□□□ -2.04
CXCL12P48061 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
CXCL12P48061 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.31□□□□□ -2.04
CXCL12P48061 OR4G11P-202ENST00000642116 1414 ntBASIC2.31□□□□□ -2.04
CXCL12P48061 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
CXCL12P48061 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
CXCL12P48061 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.31□□□□□ -2.04
CXCL12P48061 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
CXCL12P48061 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC2.3□□□□□ -2.04
CXCL12P48061 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
CXCL12P48061 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
CXCL12P48061 AC092881.1-201ENST00000638218 2733 ntBASIC2.3□□□□□ -2.04
CXCL12P48061 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
CXCL12P48061 SNORA14A-201ENST00000364773 135 ntBASIC2.3□□□□□ -2.04
CXCL12P48061 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC2.3□□□□□ -2.04
CXCL12P48061 MIR135A2-201ENST00000384854 100 ntBASIC2.3□□□□□ -2.04
CXCL12P48061 AL162578.1-201ENST00000406202 378 ntBASIC2.3□□□□□ -2.04
CXCL12P48061 MTATP6P27-201ENST00000416987 621 ntBASIC2.3□□□□□ -2.04
CXCL12P48061 MTCO2P23-201ENST00000425216 680 ntBASIC2.3□□□□□ -2.04
CXCL12P48061 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC2.3□□□□□ -2.04
CXCL12P48061 MTATP6P4-201ENST00000427725 675 ntBASIC2.3□□□□□ -2.04
CXCL12P48061 SDR42E1P3-201ENST00000438345 502 ntBASIC2.3□□□□□ -2.04
CXCL12P48061 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.3□□□□□ -2.04
CXCL12P48061 AC007327.1-201ENST00000447461 264 ntBASIC2.3□□□□□ -2.04
CXCL12P48061 AL031313.1-201ENST00000448435 256 ntBASIC2.3□□□□□ -2.04
CXCL12P48061 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC2.3□□□□□ -2.04
CXCL12P48061 RPS23P3-201ENST00000470993 430 ntBASIC2.3□□□□□ -2.04
CXCL12P48061 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC2.3□□□□□ -2.04
CXCL12P48061 WDR78-207ENST00000488333 613 ntTSL 3 BASIC2.3□□□□□ -2.04
CXCL12P48061 AIG1P1-201ENST00000503376 148 ntBASIC2.3□□□□□ -2.04
CXCL12P48061 AC114981.1-201ENST00000503897 678 ntBASIC2.3□□□□□ -2.04
CXCL12P48061 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC2.3□□□□□ -2.04
CXCL12P48061 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC2.3□□□□□ -2.04
CXCL12P48061 AC022861.1-201ENST00000522981 663 ntBASIC2.3□□□□□ -2.04
CXCL12P48061 AC125611.2-201ENST00000551907 647 ntBASIC2.3□□□□□ -2.04
CXCL12P48061 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.3□□□□□ -2.04
CXCL12P48061 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
CXCL12P48061 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC2.3□□□□□ -2.04
CXCL12P48061 AC061975.8-201ENST00000587058 721 ntBASIC2.3□□□□□ -2.04
CXCL12P48061 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.3□□□□□ -2.04
CXCL12P48061 BNIP3P39-201ENST00000601077 554 ntBASIC2.3□□□□□ -2.04
CXCL12P48061 DUXAP3-201ENST00000603616 594 ntBASIC2.3□□□□□ -2.04
CXCL12P48061 AL031176.1-201ENST00000604554 466 ntBASIC2.3□□□□□ -2.04
CXCL12P48061 AC008962.1-201ENST00000605729 304 ntBASIC2.3□□□□□ -2.04
CXCL12P48061 RNU4-5P-201ENST00000607255 135 ntBASIC2.3□□□□□ -2.04
CXCL12P48061 AC080013.4-201ENST00000607624 649 ntBASIC2.3□□□□□ -2.04
CXCL12P48061 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.3□□□□□ -2.04
CXCL12P48061 AC067747.1-201ENST00000608026 250 ntBASIC2.3□□□□□ -2.04
CXCL12P48061 AL133445.2-201ENST00000611191 527 ntBASIC2.3□□□□□ -2.04
CXCL12P48061 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.3□□□□□ -2.04
CXCL12P48061 UGP2-231ENST00000627474 264 ntTSL 5 BASIC2.3□□□□□ -2.04
CXCL12P48061 AL355596.1-201ENST00000565399 3996 ntBASIC2.3□□□□□ -2.04
CXCL12P48061 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC2.3□□□□□ -2.04
CXCL12P48061 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
CXCL12P48061 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
CXCL12P48061 AC097714.1-201ENST00000511272 1647 ntBASIC2.29□□□□□ -2.04
CXCL12P48061 ZNF29P-201ENST00000225587 168 ntBASIC2.29□□□□□ -2.04
CXCL12P48061 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
CXCL12P48061 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
CXCL12P48061 AL356131.1-201ENST00000405826 414 ntBASIC2.29□□□□□ -2.04
CXCL12P48061 SNORA11.4-201ENST00000408823 129 ntBASIC2.29□□□□□ -2.04
CXCL12P48061 BX682237.1-201ENST00000415016 335 ntBASIC2.29□□□□□ -2.04
CXCL12P48061 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.29□□□□□ -2.04
CXCL12P48061 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC2.29□□□□□ -2.04
CXCL12P48061 USP9YP11-201ENST00000427537 717 ntBASIC2.29□□□□□ -2.04
CXCL12P48061 RAC1P7-201ENST00000445367 377 ntBASIC2.29□□□□□ -2.04
CXCL12P48061 MTCO2P25-201ENST00000447065 681 ntBASIC2.29□□□□□ -2.04
CXCL12P48061 AL009048.1-201ENST00000450437 298 ntBASIC2.29□□□□□ -2.04
CXCL12P48061 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC2.29□□□□□ -2.04
CXCL12P48061 OFD1P7Y-201ENST00000454643 1155 ntBASIC2.29□□□□□ -2.04
CXCL12P48061 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.29□□□□□ -2.04
CXCL12P48061 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms