Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
NKX2-1P43699 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
NKX2-1P43699 AC007656.2-201ENST00000624902 4547 ntBASIC2.98□□□□□ -1.93
NKX2-1P43699 AC126755.2-208ENST00000327792 462 ntBASIC2.98□□□□□ -1.93
NKX2-1P43699 AC138969.1-213ENST00000331436 462 ntBASIC2.98□□□□□ -1.93
NKX2-1P43699 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
NKX2-1P43699 RPL32P3-201ENST00000359025 275 ntBASIC2.98□□□□□ -1.93
NKX2-1P43699 RNU6-181P-201ENST00000363225 107 ntBASIC2.98□□□□□ -1.93
NKX2-1P43699 RNU6-960P-201ENST00000364056 120 ntBASIC2.98□□□□□ -1.93
NKX2-1P43699 RNY4P16-201ENST00000364768 94 ntBASIC2.98□□□□□ -1.93
NKX2-1P43699 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.98□□□□□ -1.93
NKX2-1P43699 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.98□□□□□ -1.93
NKX2-1P43699 RNU6-741P-201ENST00000383889 107 ntBASIC2.98□□□□□ -1.93
NKX2-1P43699 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
NKX2-1P43699 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
NKX2-1P43699 RPS4XP3-201ENST00000398541 413 ntBASIC2.98□□□□□ -1.93
NKX2-1P43699 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC2.98□□□□□ -1.93
NKX2-1P43699 BX295541.1-201ENST00000417774 250 ntBASIC2.98□□□□□ -1.93
NKX2-1P43699 ZNF90P2-204ENST00000419323 1075 ntBASIC2.98□□□□□ -1.93
NKX2-1P43699 RPS15AP6-201ENST00000420703 385 ntBASIC2.98□□□□□ -1.93
NKX2-1P43699 EIF1P1-201ENST00000421436 341 ntBASIC2.98□□□□□ -1.93
NKX2-1P43699 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC2.98□□□□□ -1.93
NKX2-1P43699 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC2.98□□□□□ -1.93
NKX2-1P43699 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC2.98□□□□□ -1.93
NKX2-1P43699 USP9YP36-201ENST00000424581 829 ntBASIC2.98□□□□□ -1.93
NKX2-1P43699 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC2.98□□□□□ -1.93
NKX2-1P43699 MTND1P4-201ENST00000435196 415 ntBASIC2.98□□□□□ -1.93
NKX2-1P43699 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC2.98□□□□□ -1.93
NKX2-1P43699 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC2.98□□□□□ -1.93
NKX2-1P43699 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC2.98□□□□□ -1.93
NKX2-1P43699 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC2.98□□□□□ -1.93
NKX2-1P43699 CBWD4P-201ENST00000445695 655 ntBASIC2.98□□□□□ -1.93
NKX2-1P43699 AL590664.1-201ENST00000448065 339 ntBASIC2.98□□□□□ -1.93
NKX2-1P43699 RPS3AP46-201ENST00000448352 682 ntBASIC2.98□□□□□ -1.93
NKX2-1P43699 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
NKX2-1P43699 AC013267.1-201ENST00000458227 267 ntBASIC2.98□□□□□ -1.93
NKX2-1P43699 RNA5SP310-201ENST00000459084 116 ntBASIC2.98□□□□□ -1.93
NKX2-1P43699 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.98□□□□□ -1.93
NKX2-1P43699 AC010493.1-201ENST00000513479 292 ntBASIC2.98□□□□□ -1.93
NKX2-1P43699 RNU2-27P-201ENST00000516185 142 ntBASIC2.98□□□□□ -1.93
NKX2-1P43699 RNU6-445P-201ENST00000516949 107 ntBASIC2.98□□□□□ -1.93
NKX2-1P43699 RN7SKP258-201ENST00000517151 304 ntBASIC2.98□□□□□ -1.93
NKX2-1P43699 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.98□□□□□ -1.93
NKX2-1P43699 AC016957.1-201ENST00000534895 309 ntBASIC2.98□□□□□ -1.93
NKX2-1P43699 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC2.98□□□□□ -1.93
NKX2-1P43699 AC128657.1-201ENST00000549459 145 ntBASIC2.98□□□□□ -1.93
NKX2-1P43699 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC2.98□□□□□ -1.93
NKX2-1P43699 IGKV2OR2-8-201ENST00000558710 300 ntBASIC2.98□□□□□ -1.93
NKX2-1P43699 AL845331.3-202ENST00000562856 261 ntBASIC2.98□□□□□ -1.93
NKX2-1P43699 RN7SL600P-201ENST00000581811 299 ntBASIC2.98□□□□□ -1.93
NKX2-1P43699 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC2.98□□□□□ -1.93
NKX2-1P43699 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC2.98□□□□□ -1.93
NKX2-1P43699 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.98□□□□□ -1.93
NKX2-1P43699 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC2.98□□□□□ -1.93
NKX2-1P43699 AC068831.7-201ENST00000616954 363 ntBASIC2.98□□□□□ -1.93
NKX2-1P43699 MIR6758-201ENST00000620653 63 ntBASIC2.98□□□□□ -1.93
NKX2-1P43699 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC2.98□□□□□ -1.93
NKX2-1P43699 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC2.98□□□□□ -1.93
NKX2-1P43699 MIR492-201ENST00000638676 116 ntBASIC2.98□□□□□ -1.93
NKX2-1P43699 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
NKX2-1P43699 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
NKX2-1P43699 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC2.98□□□□□ -1.93
NKX2-1P43699 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
NKX2-1P43699 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC2.98□□□□□ -1.93
NKX2-1P43699 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
NKX2-1P43699 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC2.97□□□□□ -1.93
NKX2-1P43699 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC2.97□□□□□ -1.93
NKX2-1P43699 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
NKX2-1P43699 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
NKX2-1P43699 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC2.97□□□□□ -1.93
NKX2-1P43699 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
NKX2-1P43699 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
NKX2-1P43699 OR5J1P-201ENST00000313544 939 ntBASIC2.97□□□□□ -1.93
NKX2-1P43699 RNU1-75P-201ENST00000347264 129 ntBASIC2.97□□□□□ -1.93
NKX2-1P43699 SNORA20.2-201ENST00000383922 131 ntBASIC2.97□□□□□ -1.93
NKX2-1P43699 MIR591-201ENST00000385290 95 ntBASIC2.97□□□□□ -1.93
NKX2-1P43699 AL022722.2-201ENST00000402519 180 ntBASIC2.97□□□□□ -1.93
NKX2-1P43699 AC127391.1-201ENST00000411737 98 ntBASIC2.97□□□□□ -1.93
NKX2-1P43699 AC009237.5-201ENST00000414271 501 ntBASIC2.97□□□□□ -1.93
NKX2-1P43699 USP9YP18-201ENST00000425912 695 ntBASIC2.97□□□□□ -1.93
NKX2-1P43699 ISCA1P6-201ENST00000427740 390 ntBASIC2.97□□□□□ -1.93
NKX2-1P43699 AC119618.1-201ENST00000434191 222 ntBASIC2.97□□□□□ -1.93
NKX2-1P43699 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC2.97□□□□□ -1.93
NKX2-1P43699 AC079781.2-201ENST00000446424 169 ntBASIC2.97□□□□□ -1.93
NKX2-1P43699 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC2.97□□□□□ -1.93
NKX2-1P43699 AC003071.1-201ENST00000451219 789 ntBASIC2.97□□□□□ -1.93
NKX2-1P43699 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC2.97□□□□□ -1.93
NKX2-1P43699 AC009220.1-201ENST00000451614 275 ntBASIC2.97□□□□□ -1.93
NKX2-1P43699 RNU6-420P-201ENST00000458780 107 ntBASIC2.97□□□□□ -1.93
NKX2-1P43699 AC087588.1-201ENST00000462203 316 ntBASIC2.97□□□□□ -1.93
NKX2-1P43699 RN7SL330P-201ENST00000469709 307 ntBASIC2.97□□□□□ -1.93
NKX2-1P43699 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.97□□□□□ -1.93
NKX2-1P43699 AC023194.1-201ENST00000493084 308 ntBASIC2.97□□□□□ -1.93
NKX2-1P43699 AC110768.1-201ENST00000509222 400 ntBASIC2.97□□□□□ -1.93
NKX2-1P43699 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC2.97□□□□□ -1.93
NKX2-1P43699 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC2.97□□□□□ -1.93
NKX2-1P43699 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC2.97□□□□□ -1.93
NKX2-1P43699 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC2.97□□□□□ -1.93
NKX2-1P43699 RN7SKP122-201ENST00000515923 296 ntBASIC2.97□□□□□ -1.93
NKX2-1P43699 RNU6-927P-201ENST00000516199 100 ntBASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 159.7 ms