Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.84□□□□□ -1.8
CIITAP33076 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
CIITAP33076 AL672296.1-201ENST00000427780 2158 ntBASIC3.83□□□□□ -1.8
CIITAP33076 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CIITAP33076 RNA5SP72-201ENST00000364442 117 ntBASIC3.83□□□□□ -1.8
CIITAP33076 Y_RNA.390-201ENST00000383932 102 ntBASIC3.83□□□□□ -1.8
CIITAP33076 RNY3P14-201ENST00000384309 102 ntBASIC3.83□□□□□ -1.8
CIITAP33076 SNORD115-47-201ENST00000391226 86 ntBASIC3.83□□□□□ -1.8
CIITAP33076 RPL23AP32-201ENST00000395315 459 ntBASIC3.83□□□□□ -1.8
CIITAP33076 RNU6-712P-201ENST00000410558 100 ntBASIC3.83□□□□□ -1.8
CIITAP33076 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.83□□□□□ -1.8
CIITAP33076 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC3.83□□□□□ -1.8
CIITAP33076 AL158071.1-201ENST00000430315 461 ntBASIC3.83□□□□□ -1.8
CIITAP33076 MTND1P2-201ENST00000430604 821 ntBASIC3.83□□□□□ -1.8
CIITAP33076 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC3.83□□□□□ -1.8
CIITAP33076 AC132479.1-201ENST00000449160 144 ntBASIC3.83□□□□□ -1.8
CIITAP33076 C1DP4-201ENST00000455429 424 ntBASIC3.83□□□□□ -1.8
CIITAP33076 SNORD121B-201ENST00000458838 81 ntBASIC3.83□□□□□ -1.8
CIITAP33076 snoU13.8-201ENST00000458890 104 ntBASIC3.83□□□□□ -1.8
CIITAP33076 snoU13.4-201ENST00000458916 104 ntBASIC3.83□□□□□ -1.8
CIITAP33076 AC078785.3-201ENST00000476607 425 ntBASIC3.83□□□□□ -1.8
CIITAP33076 AC021205.2-201ENST00000480069 347 ntBASIC3.83□□□□□ -1.8
CIITAP33076 AC021382.1-201ENST00000483523 359 ntBASIC3.83□□□□□ -1.8
CIITAP33076 RPL7P47-201ENST00000497299 556 ntBASIC3.83□□□□□ -1.8
CIITAP33076 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC3.83□□□□□ -1.8
CIITAP33076 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC3.83□□□□□ -1.8
CIITAP33076 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.83□□□□□ -1.8
CIITAP33076 MIR3167-201ENST00000579623 85 ntBASIC3.83□□□□□ -1.8
CIITAP33076 MIR3944-201ENST00000581277 108 ntBASIC3.83□□□□□ -1.8
CIITAP33076 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.83□□□□□ -1.8
CIITAP33076 AL391646.1-201ENST00000603860 190 ntBASIC3.83□□□□□ -1.8
CIITAP33076 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.83□□□□□ -1.8
CIITAP33076 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
CIITAP33076 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.83□□□□□ -1.8
CIITAP33076 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.83□□□□□ -1.8
CIITAP33076 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.82□□□□□ -1.8
CIITAP33076 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.82□□□□□ -1.8
CIITAP33076 RNU6-50P-201ENST00000362356 103 ntBASIC3.82□□□□□ -1.8
CIITAP33076 RNA5SP197-201ENST00000363357 119 ntBASIC3.82□□□□□ -1.8
CIITAP33076 RNU6-97P-201ENST00000363387 104 ntBASIC3.82□□□□□ -1.8
CIITAP33076 RNU6-629P-201ENST00000384061 103 ntBASIC3.82□□□□□ -1.8
CIITAP33076 RNVU1-14-201ENST00000384770 164 ntBASIC3.82□□□□□ -1.8
CIITAP33076 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
CIITAP33076 PTMAP5-201ENST00000393073 333 ntBASIC3.82□□□□□ -1.8
CIITAP33076 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CIITAP33076 CIR1P3-201ENST00000405137 479 ntBASIC3.82□□□□□ -1.8
CIITAP33076 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.82□□□□□ -1.8
CIITAP33076 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.82□□□□□ -1.8
CIITAP33076 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CIITAP33076 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.82□□□□□ -1.8
CIITAP33076 MTCO2P19-201ENST00000427513 598 ntBASIC3.82□□□□□ -1.8
CIITAP33076 AC006946.1-201ENST00000429106 328 ntBASIC3.82□□□□□ -1.8
CIITAP33076 AC073464.1-201ENST00000429823 534 ntBASIC3.82□□□□□ -1.8
CIITAP33076 AC108734.1-201ENST00000439549 399 ntBASIC3.82□□□□□ -1.8
CIITAP33076 AL121871.1-201ENST00000443413 436 ntBASIC3.82□□□□□ -1.8
CIITAP33076 SNRPGP3-201ENST00000469405 227 ntBASIC3.82□□□□□ -1.8
CIITAP33076 RPL23AP55-201ENST00000498163 452 ntBASIC3.82□□□□□ -1.8
CIITAP33076 AC020893.1-201ENST00000502452 580 ntBASIC3.82□□□□□ -1.8
CIITAP33076 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC3.82□□□□□ -1.8
CIITAP33076 FAM92A1P2-202ENST00000504766 877 ntBASIC3.82□□□□□ -1.8
CIITAP33076 AC116353.2-201ENST00000505332 712 ntBASIC3.82□□□□□ -1.8
CIITAP33076 HSPD1P15-201ENST00000505573 1122 ntBASIC3.82□□□□□ -1.8
CIITAP33076 AC009646.1-201ENST00000510455 318 ntBASIC3.82□□□□□ -1.8
CIITAP33076 RNA5SP468-201ENST00000516782 93 ntBASIC3.82□□□□□ -1.8
CIITAP33076 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CIITAP33076 RPS3AP4-201ENST00000555161 764 ntBASIC3.82□□□□□ -1.8
CIITAP33076 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.82□□□□□ -1.8
CIITAP33076 AC060771.1-201ENST00000582031 164 ntBASIC3.82□□□□□ -1.8
CIITAP33076 AC245014.2-201ENST00000603689 287 ntBASIC3.82□□□□□ -1.8
CIITAP33076 AC011468.4-201ENST00000603942 409 ntBASIC3.82□□□□□ -1.8
CIITAP33076 AC246785.4-201ENST00000605374 287 ntBASIC3.82□□□□□ -1.8
CIITAP33076 AC073534.2-201ENST00000620377 381 ntBASIC3.82□□□□□ -1.8
CIITAP33076 AL356585.4-201ENST00000623078 1229 ntBASIC3.82□□□□□ -1.8
CIITAP33076 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.82□□□□□ -1.8
CIITAP33076 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.82□□□□□ -1.8
CIITAP33076 MIR3688-2-201ENST00000636963 87 ntBASIC3.82□□□□□ -1.8
CIITAP33076 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CIITAP33076 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CIITAP33076 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CIITAP33076 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.82□□□□□ -1.8
CIITAP33076 AC009902.3-201ENST00000606235 2172 ntBASIC3.82□□□□□ -1.8
CIITAP33076 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CIITAP33076 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.81□□□□□ -1.8
CIITAP33076 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.81□□□□□ -1.8
CIITAP33076 AC017071.1-201ENST00000564407 2204 ntBASIC3.81□□□□□ -1.8
CIITAP33076 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
CIITAP33076 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.81□□□□□ -1.8
CIITAP33076 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CIITAP33076 MIR208A-201ENST00000362287 71 ntBASIC3.81□□□□□ -1.8
CIITAP33076 RNU6-181P-201ENST00000363225 107 ntBASIC3.81□□□□□ -1.8
CIITAP33076 Y_RNA.159-201ENST00000363674 87 ntBASIC3.81□□□□□ -1.8
CIITAP33076 RNU4-12P-201ENST00000365233 139 ntBASIC3.81□□□□□ -1.8
CIITAP33076 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC3.81□□□□□ -1.8
CIITAP33076 U3.20-201ENST00000390909 217 ntBASIC3.81□□□□□ -1.8
CIITAP33076 RNU4-55P-201ENST00000410731 137 ntBASIC3.81□□□□□ -1.8
CIITAP33076 BX323014.1-201ENST00000412876 237 ntBASIC3.81□□□□□ -1.8
CIITAP33076 RPL30P2-201ENST00000414021 291 ntBASIC3.81□□□□□ -1.8
CIITAP33076 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.81□□□□□ -1.8
CIITAP33076 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC3.81□□□□□ -1.8
CIITAP33076 AC019097.1-201ENST00000424783 735 ntBASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms