Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 IGKV3-31-201ENST00000523109 329 ntBASIC2.59□□□□□ -1.99
HOXA9P31269 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
HOXA9P31269 MTCO2P15-201ENST00000532655 656 ntBASIC2.59□□□□□ -1.99
HOXA9P31269 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -1.99
HOXA9P31269 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.59□□□□□ -1.99
HOXA9P31269 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC2.59□□□□□ -1.99
HOXA9P31269 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC2.59□□□□□ -1.99
HOXA9P31269 FAM60BP-201ENST00000578364 658 ntBASIC2.59□□□□□ -1.99
HOXA9P31269 AL136363.1-201ENST00000605349 337 ntBASIC2.59□□□□□ -1.99
HOXA9P31269 AC080013.3-201ENST00000606839 578 ntBASIC2.59□□□□□ -1.99
HOXA9P31269 AC131235.4-201ENST00000609288 620 ntBASIC2.59□□□□□ -1.99
HOXA9P31269 SNHG22-203ENST00000617833 660 ntBASIC2.59□□□□□ -1.99
HOXA9P31269 MIR1322-201ENST00000638013 71 ntBASIC2.59□□□□□ -1.99
HOXA9P31269 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.59□□□□□ -1.99
HOXA9P31269 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC2.58□□□□□ -2
HOXA9P31269 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.58□□□□□ -2
HOXA9P31269 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
HOXA9P31269 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
HOXA9P31269 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
HOXA9P31269 RNU6-621P-201ENST00000364752 109 ntBASIC2.58□□□□□ -2
HOXA9P31269 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.58□□□□□ -2
HOXA9P31269 DHFRP6-201ENST00000401776 268 ntBASIC2.58□□□□□ -2
HOXA9P31269 RN7SKP223-201ENST00000410582 62 ntBASIC2.58□□□□□ -2
HOXA9P31269 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC2.58□□□□□ -2
HOXA9P31269 MTCO2P17-201ENST00000424336 677 ntBASIC2.58□□□□□ -2
HOXA9P31269 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC2.58□□□□□ -2
HOXA9P31269 PSMA6P3-201ENST00000428242 164 ntBASIC2.58□□□□□ -2
HOXA9P31269 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC2.58□□□□□ -2
HOXA9P31269 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC2.58□□□□□ -2
HOXA9P31269 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC2.58□□□□□ -2
HOXA9P31269 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC2.58□□□□□ -2
HOXA9P31269 CR769776.1-201ENST00000441254 787 ntBASIC2.58□□□□□ -2
HOXA9P31269 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC2.58□□□□□ -2
HOXA9P31269 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.58□□□□□ -2
HOXA9P31269 RPS20P24-201ENST00000457473 361 ntBASIC2.58□□□□□ -2
HOXA9P31269 RPS15AP17-201ENST00000470598 390 ntBASIC2.58□□□□□ -2
HOXA9P31269 AP000852.1-201ENST00000472460 573 ntBASIC2.58□□□□□ -2
HOXA9P31269 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC2.58□□□□□ -2
HOXA9P31269 RPS29P21-201ENST00000496272 170 ntBASIC2.58□□□□□ -2
HOXA9P31269 AC091951.3-201ENST00000504093 246 ntBASIC2.58□□□□□ -2
HOXA9P31269 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC2.58□□□□□ -2
HOXA9P31269 RNU6-583P-201ENST00000516012 92 ntBASIC2.58□□□□□ -2
HOXA9P31269 RNU6-27P-201ENST00000516146 107 ntBASIC2.58□□□□□ -2
HOXA9P31269 RNU6-311P-201ENST00000516224 102 ntBASIC2.58□□□□□ -2
HOXA9P31269 AP000867.2-201ENST00000532468 320 ntBASIC2.58□□□□□ -2
HOXA9P31269 AP000873.5-201ENST00000533906 236 ntBASIC2.58□□□□□ -2
HOXA9P31269 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.58□□□□□ -2
HOXA9P31269 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.58□□□□□ -2
HOXA9P31269 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.58□□□□□ -2
HOXA9P31269 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC2.58□□□□□ -2
HOXA9P31269 MTND4P33-201ENST00000556706 766 ntBASIC2.58□□□□□ -2
HOXA9P31269 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC2.58□□□□□ -2
HOXA9P31269 AC022662.1-201ENST00000580252 331 ntBASIC2.58□□□□□ -2
HOXA9P31269 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.58□□□□□ -2
HOXA9P31269 HSPE1P7-201ENST00000604681 321 ntBASIC2.58□□□□□ -2
HOXA9P31269 AC024560.3-201ENST00000608482 349 ntBASIC2.58□□□□□ -2
HOXA9P31269 AC109809.1-201ENST00000619665 545 ntBASIC2.58□□□□□ -2
HOXA9P31269 AC013470.4-201ENST00000619978 986 ntBASIC2.58□□□□□ -2
HOXA9P31269 AC068880.5-201ENST00000624331 290 ntBASIC2.58□□□□□ -2
HOXA9P31269 AC091925.2-201ENST00000625059 256 ntBASIC2.58□□□□□ -2
HOXA9P31269 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC2.58□□□□□ -2
HOXA9P31269 AC116618.1-201ENST00000634617 774 ntBASIC2.58□□□□□ -2
HOXA9P31269 AC110079.1-202ENST00000635213 138 ntBASIC2.58□□□□□ -2
HOXA9P31269 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.58□□□□□ -2
HOXA9P31269 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.58□□□□□ -2
HOXA9P31269 Z82195.2-201ENST00000612348 18351 ntBASIC2.57□□□□□ -2
HOXA9P31269 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.57□□□□□ -2
HOXA9P31269 AP006437.1-201ENST00000641440 3685 ntBASIC2.57□□□□□ -2
HOXA9P31269 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.57□□□□□ -2
HOXA9P31269 SNORA25.6-201ENST00000364121 118 ntBASIC2.57□□□□□ -2
HOXA9P31269 RNU1-73P-201ENST00000383971 164 ntBASIC2.57□□□□□ -2
HOXA9P31269 RNU6-83P-201ENST00000384568 112 ntBASIC2.57□□□□□ -2
HOXA9P31269 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC2.57□□□□□ -2
HOXA9P31269 AC079780.1-201ENST00000428259 207 ntBASIC2.57□□□□□ -2
HOXA9P31269 AL139415.2-201ENST00000431968 163 ntBASIC2.57□□□□□ -2
HOXA9P31269 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC2.57□□□□□ -2
HOXA9P31269 AC009961.3-201ENST00000449832 765 ntBASIC2.57□□□□□ -2
HOXA9P31269 RPL36AP51-201ENST00000487216 318 ntBASIC2.57□□□□□ -2
HOXA9P31269 AC108729.1-201ENST00000487812 947 ntBASIC2.57□□□□□ -2
HOXA9P31269 AC104090.1-201ENST00000506341 1171 ntBASIC2.57□□□□□ -2
HOXA9P31269 AC010625.1-201ENST00000511296 403 ntBASIC2.57□□□□□ -2
HOXA9P31269 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.57□□□□□ -2
HOXA9P31269 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.57□□□□□ -2
HOXA9P31269 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
HOXA9P31269 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.57□□□□□ -2
HOXA9P31269 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC2.57□□□□□ -2
HOXA9P31269 HSPE1P3-201ENST00000559254 309 ntBASIC2.57□□□□□ -2
HOXA9P31269 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC2.57□□□□□ -2
HOXA9P31269 MIR1273D-201ENST00000577266 86 ntBASIC2.57□□□□□ -2
HOXA9P31269 AC103810.1-201ENST00000579873 453 ntBASIC2.57□□□□□ -2
HOXA9P31269 MIR4648-201ENST00000580107 72 ntBASIC2.57□□□□□ -2
HOXA9P31269 OR4K7P-201ENST00000580232 945 ntBASIC2.57□□□□□ -2
HOXA9P31269 MIR4637-201ENST00000582405 84 ntBASIC2.57□□□□□ -2
HOXA9P31269 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC2.57□□□□□ -2
HOXA9P31269 BNIP3P24-201ENST00000593398 557 ntBASIC2.57□□□□□ -2
HOXA9P31269 AC107952.2-201ENST00000606048 486 ntBASIC2.57□□□□□ -2
HOXA9P31269 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.57□□□□□ -2
HOXA9P31269 MIR1291-201ENST00000627649 87 ntBASIC2.57□□□□□ -2
HOXA9P31269 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.57□□□□□ -2
HOXA9P31269 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms