Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 RPS3AP23-202ENST00000574601 686 ntBASIC2.09□□□□□ -2.07
HLA-DMAP28067 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC2.09□□□□□ -2.07
HLA-DMAP28067 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.09□□□□□ -2.07
HLA-DMAP28067 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.09□□□□□ -2.07
HLA-DMAP28067 BNIP3P27-201ENST00000599991 412 ntBASIC2.09□□□□□ -2.07
HLA-DMAP28067 SRGNP1-201ENST00000603392 451 ntBASIC2.09□□□□□ -2.07
HLA-DMAP28067 AC004853.1-201ENST00000604902 698 ntBASIC2.09□□□□□ -2.07
HLA-DMAP28067 AL390208.1-201ENST00000605885 644 ntBASIC2.09□□□□□ -2.07
HLA-DMAP28067 AC080013.4-201ENST00000607624 649 ntBASIC2.09□□□□□ -2.07
HLA-DMAP28067 RNU6-1192P-201ENST00000612197 107 ntBASIC2.09□□□□□ -2.07
HLA-DMAP28067 AC024257.5-201ENST00000612739 531 ntBASIC2.09□□□□□ -2.07
HLA-DMAP28067 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.09□□□□□ -2.07
HLA-DMAP28067 RNU6-489P-201ENST00000618289 107 ntBASIC2.09□□□□□ -2.07
HLA-DMAP28067 MIR6075-201ENST00000620782 95 ntBASIC2.09□□□□□ -2.07
HLA-DMAP28067 AC109454.4-201ENST00000623411 649 ntBASIC2.09□□□□□ -2.07
HLA-DMAP28067 AP000720.1-201ENST00000625091 483 ntBASIC2.09□□□□□ -2.07
HLA-DMAP28067 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.09□□□□□ -2.07
HLA-DMAP28067 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.09□□□□□ -2.08
HLA-DMAP28067 MTND4P35-201ENST00000604257 1375 ntBASIC2.09□□□□□ -2.08
HLA-DMAP28067 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.08□□□□□ -2.08
HLA-DMAP28067 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
HLA-DMAP28067 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
HLA-DMAP28067 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
HLA-DMAP28067 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
HLA-DMAP28067 RNU6-76P-201ENST00000384060 104 ntBASIC2.08□□□□□ -2.08
HLA-DMAP28067 RNU4-52P-201ENST00000384209 138 ntBASIC2.08□□□□□ -2.08
HLA-DMAP28067 MIR34B-201ENST00000385076 84 ntBASIC2.08□□□□□ -2.08
HLA-DMAP28067 RNU6-1176P-201ENST00000390955 107 ntBASIC2.08□□□□□ -2.08
HLA-DMAP28067 RNU6-952P-201ENST00000391164 108 ntBASIC2.08□□□□□ -2.08
HLA-DMAP28067 AL356131.1-201ENST00000405826 414 ntBASIC2.08□□□□□ -2.08
HLA-DMAP28067 RPS3AP25-201ENST00000411660 793 ntBASIC2.08□□□□□ -2.08
HLA-DMAP28067 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC2.08□□□□□ -2.08
HLA-DMAP28067 CCDC58P2-201ENST00000417131 366 ntBASIC2.08□□□□□ -2.08
HLA-DMAP28067 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC2.08□□□□□ -2.08
HLA-DMAP28067 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.08□□□□□ -2.08
HLA-DMAP28067 AL139421.1-201ENST00000423010 169 ntBASIC2.08□□□□□ -2.08
HLA-DMAP28067 NANOGP2-201ENST00000435391 727 ntBASIC2.08□□□□□ -2.08
HLA-DMAP28067 CYCSP32-201ENST00000440548 321 ntBASIC2.08□□□□□ -2.08
HLA-DMAP28067 AL049734.2-201ENST00000441066 616 ntBASIC2.08□□□□□ -2.08
HLA-DMAP28067 RPL23AP76-201ENST00000441860 458 ntBASIC2.08□□□□□ -2.08
HLA-DMAP28067 PIGFP3-201ENST00000441918 722 ntBASIC2.08□□□□□ -2.08
HLA-DMAP28067 EEF1B2P7-201ENST00000451177 676 ntBASIC2.08□□□□□ -2.08
HLA-DMAP28067 OFD1P7Y-201ENST00000454643 1155 ntBASIC2.08□□□□□ -2.08
HLA-DMAP28067 RPL18AP17-201ENST00000455326 198 ntBASIC2.08□□□□□ -2.08
HLA-DMAP28067 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.08□□□□□ -2.08
HLA-DMAP28067 AC108734.3-201ENST00000481241 1165 ntBASIC2.08□□□□□ -2.08
HLA-DMAP28067 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC2.08□□□□□ -2.08
HLA-DMAP28067 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC2.08□□□□□ -2.08
HLA-DMAP28067 AC023141.11-201ENST00000508864 202 ntBASIC2.08□□□□□ -2.08
HLA-DMAP28067 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC2.08□□□□□ -2.08
HLA-DMAP28067 AC022447.1-201ENST00000515358 464 ntBASIC2.08□□□□□ -2.08
HLA-DMAP28067 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC2.08□□□□□ -2.08
HLA-DMAP28067 AL132657.2-201ENST00000564417 358 ntBASIC2.08□□□□□ -2.08
HLA-DMAP28067 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.08□□□□□ -2.08
HLA-DMAP28067 AC135628.1-201ENST00000568867 534 ntBASIC2.08□□□□□ -2.08
HLA-DMAP28067 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.08□□□□□ -2.08
HLA-DMAP28067 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC2.08□□□□□ -2.08
HLA-DMAP28067 AC069545.1-201ENST00000605671 358 ntBASIC2.08□□□□□ -2.08
HLA-DMAP28067 MIR92B-201ENST00000607575 96 ntBASIC2.08□□□□□ -2.08
HLA-DMAP28067 AC243773.3-201ENST00000613270 256 ntBASIC2.08□□□□□ -2.08
HLA-DMAP28067 AC012640.5-201ENST00000623897 319 ntBASIC2.08□□□□□ -2.08
HLA-DMAP28067 AP002371.2-201ENST00000624450 503 ntBASIC2.08□□□□□ -2.08
HLA-DMAP28067 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC2.08□□□□□ -2.08
HLA-DMAP28067 AC004808.1-201ENST00000627671 721 ntBASIC2.08□□□□□ -2.08
HLA-DMAP28067 OR8B1P-202ENST00000641132 1178 ntBASIC2.08□□□□□ -2.08
HLA-DMAP28067 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
HLA-DMAP28067 ZNF658B-202ENST00000615961 3375 ntBASIC2.07□□□□□ -2.08
HLA-DMAP28067 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.07□□□□□ -2.08
HLA-DMAP28067 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC2.07□□□□□ -2.08
HLA-DMAP28067 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
HLA-DMAP28067 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
HLA-DMAP28067 RNU4-51P-201ENST00000364206 140 ntBASIC2.07□□□□□ -2.08
HLA-DMAP28067 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.07□□□□□ -2.08
HLA-DMAP28067 AL355497.1-201ENST00000406262 551 ntBASIC2.07□□□□□ -2.08
HLA-DMAP28067 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
HLA-DMAP28067 COTL1P1-201ENST00000422309 375 ntBASIC2.07□□□□□ -2.08
HLA-DMAP28067 AC092047.1-201ENST00000424997 240 ntBASIC2.07□□□□□ -2.08
HLA-DMAP28067 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC2.07□□□□□ -2.08
HLA-DMAP28067 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
HLA-DMAP28067 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC2.07□□□□□ -2.08
HLA-DMAP28067 OR10R1P-201ENST00000441524 1141 ntBASIC2.07□□□□□ -2.08
HLA-DMAP28067 AL135938.1-201ENST00000443141 297 ntBASIC2.07□□□□□ -2.08
HLA-DMAP28067 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.07□□□□□ -2.08
HLA-DMAP28067 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.07□□□□□ -2.08
HLA-DMAP28067 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC2.07□□□□□ -2.08
HLA-DMAP28067 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.07□□□□□ -2.08
HLA-DMAP28067 AC138853.1-201ENST00000503549 823 ntBASIC2.07□□□□□ -2.08
HLA-DMAP28067 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.07□□□□□ -2.08
HLA-DMAP28067 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.07□□□□□ -2.08
HLA-DMAP28067 RNU5F-8P-201ENST00000515941 111 ntBASIC2.07□□□□□ -2.08
HLA-DMAP28067 RNU6-583P-201ENST00000516012 92 ntBASIC2.07□□□□□ -2.08
HLA-DMAP28067 AC022861.1-201ENST00000522981 663 ntBASIC2.07□□□□□ -2.08
HLA-DMAP28067 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.07□□□□□ -2.08
HLA-DMAP28067 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC2.07□□□□□ -2.08
HLA-DMAP28067 SLC2A13P1-201ENST00000531560 322 ntBASIC2.07□□□□□ -2.08
HLA-DMAP28067 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC2.07□□□□□ -2.08
HLA-DMAP28067 AL391261.3-201ENST00000557194 520 ntBASIC2.07□□□□□ -2.08
HLA-DMAP28067 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.07□□□□□ -2.08
HLA-DMAP28067 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC2.07□□□□□ -2.08
HLA-DMAP28067 AGGF1P5-201ENST00000567900 919 ntBASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms