Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 AL138885.1-201ENST00000405921 675 ntBASIC3.07□□□□□ -1.92
KRT3P12035 RPL23AP39-201ENST00000415533 405 ntBASIC3.07□□□□□ -1.92
KRT3P12035 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC3.07□□□□□ -1.92
KRT3P12035 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC3.07□□□□□ -1.92
KRT3P12035 TMEM167AP1-201ENST00000423409 219 ntBASIC3.07□□□□□ -1.92
KRT3P12035 AC104332.2-201ENST00000429959 156 ntBASIC3.07□□□□□ -1.92
KRT3P12035 AC022018.1-201ENST00000430685 241 ntBASIC3.07□□□□□ -1.92
KRT3P12035 RPS6P15-201ENST00000431996 751 ntBASIC3.07□□□□□ -1.92
KRT3P12035 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC3.07□□□□□ -1.92
KRT3P12035 COX6CP2-201ENST00000444980 225 ntBASIC3.07□□□□□ -1.92
KRT3P12035 TPT1P14-201ENST00000448018 505 ntBASIC3.07□□□□□ -1.92
KRT3P12035 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC3.07□□□□□ -1.92
KRT3P12035 AC098826.2-201ENST00000452011 651 ntBASIC3.07□□□□□ -1.92
KRT3P12035 AP1S2P1-201ENST00000457344 379 ntBASIC3.07□□□□□ -1.92
KRT3P12035 AP004217.1-201ENST00000480579 346 ntBASIC3.07□□□□□ -1.92
KRT3P12035 AC135721.1-201ENST00000497954 479 ntBASIC3.07□□□□□ -1.92
KRT3P12035 RN7SKP57-201ENST00000517248 293 ntBASIC3.07□□□□□ -1.92
KRT3P12035 AKIRIN1P1-201ENST00000547384 544 ntBASIC3.07□□□□□ -1.92
KRT3P12035 AC107016.2-201ENST00000547968 190 ntBASIC3.07□□□□□ -1.92
KRT3P12035 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.07□□□□□ -1.92
KRT3P12035 AP005205.1-201ENST00000563503 508 ntBASIC3.07□□□□□ -1.92
KRT3P12035 PCMTD1P2-201ENST00000565017 355 ntBASIC3.07□□□□□ -1.92
KRT3P12035 MIR4307-201ENST00000582802 84 ntBASIC3.07□□□□□ -1.92
KRT3P12035 AC105224.1-201ENST00000587055 421 ntBASIC3.07□□□□□ -1.92
KRT3P12035 BNIP3P33-201ENST00000598912 569 ntBASIC3.07□□□□□ -1.92
KRT3P12035 AC068790.3-201ENST00000602988 553 ntBASIC3.07□□□□□ -1.92
KRT3P12035 OR10AB1P-201ENST00000609613 938 ntBASIC3.07□□□□□ -1.92
KRT3P12035 AL360219.1-201ENST00000610230 366 ntBASIC3.07□□□□□ -1.92
KRT3P12035 AL442067.2-201ENST00000614033 363 ntBASIC3.07□□□□□ -1.92
KRT3P12035 AL603758.1-201ENST00000618654 241 ntBASIC3.07□□□□□ -1.92
KRT3P12035 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.07□□□□□ -1.92
KRT3P12035 AC079248.2-201ENST00000623779 326 ntBASIC3.07□□□□□ -1.92
KRT3P12035 AC091965.5-201ENST00000624785 342 ntBASIC3.07□□□□□ -1.92
KRT3P12035 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.07□□□□□ -1.92
KRT3P12035 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
KRT3P12035 CCT4P2-201ENST00000233836 1548 ntBASIC3.07□□□□□ -1.92
KRT3P12035 PABPC1P9-201ENST00000426076 1612 ntBASIC3.07□□□□□ -1.92
KRT3P12035 OR4G2P-202ENST00000641004 1759 ntBASIC3.07□□□□□ -1.92
KRT3P12035 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.07□□□□□ -1.92
KRT3P12035 AC000403.1-201ENST00000613696 3585 ntBASIC3.06□□□□□ -1.92
KRT3P12035 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.06□□□□□ -1.92
KRT3P12035 RNU1-35P-201ENST00000362782 153 ntBASIC3.06□□□□□ -1.92
KRT3P12035 RNU6-799P-201ENST00000363567 107 ntBASIC3.06□□□□□ -1.92
KRT3P12035 RNU6-501P-201ENST00000364072 100 ntBASIC3.06□□□□□ -1.92
KRT3P12035 SNORA23-201ENST00000365128 182 ntBASIC3.06□□□□□ -1.92
KRT3P12035 SNORA9.2-201ENST00000365361 133 ntBASIC3.06□□□□□ -1.92
KRT3P12035 U8.9-201ENST00000365667 134 ntBASIC3.06□□□□□ -1.92
KRT3P12035 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC3.06□□□□□ -1.92
KRT3P12035 SNORA26.7-201ENST00000391288 122 ntBASIC3.06□□□□□ -1.92
KRT3P12035 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.06□□□□□ -1.92
KRT3P12035 TPMTP3-201ENST00000411928 735 ntBASIC3.06□□□□□ -1.92
KRT3P12035 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.06□□□□□ -1.92
KRT3P12035 ATG3P1-201ENST00000419507 911 ntBASIC3.06□□□□□ -1.92
KRT3P12035 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC3.06□□□□□ -1.92
KRT3P12035 AC018630.2-202ENST00000422992 927 ntBASIC3.06□□□□□ -1.92
KRT3P12035 RPL37P21-201ENST00000435890 276 ntBASIC3.06□□□□□ -1.92
KRT3P12035 RPL23AP58-201ENST00000440453 469 ntBASIC3.06□□□□□ -1.92
KRT3P12035 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC3.06□□□□□ -1.92
KRT3P12035 MTND1P9-201ENST00000453775 944 ntBASIC3.06□□□□□ -1.92
KRT3P12035 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.06□□□□□ -1.92
KRT3P12035 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC3.06□□□□□ -1.92
KRT3P12035 RPS29P12-201ENST00000460178 152 ntBASIC3.06□□□□□ -1.92
KRT3P12035 HSPE1P6-201ENST00000479457 291 ntBASIC3.06□□□□□ -1.92
KRT3P12035 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.06□□□□□ -1.92
KRT3P12035 RNU6-56P-201ENST00000516986 93 ntBASIC3.06□□□□□ -1.92
KRT3P12035 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
KRT3P12035 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC3.06□□□□□ -1.92
KRT3P12035 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC3.06□□□□□ -1.92
KRT3P12035 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.06□□□□□ -1.92
KRT3P12035 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
KRT3P12035 BCRP9-201ENST00000605312 388 ntBASIC3.06□□□□□ -1.92
KRT3P12035 AC009902.3-201ENST00000606235 2172 ntBASIC3.06□□□□□ -1.92
KRT3P12035 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC3.06□□□□□ -1.92
KRT3P12035 MIR6130-201ENST00000619419 109 ntBASIC3.06□□□□□ -1.92
KRT3P12035 AC078883.4-201ENST00000623218 367 ntBASIC3.06□□□□□ -1.92
KRT3P12035 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.06□□□□□ -1.92
KRT3P12035 AC093591.3-201ENST00000634516 308 ntBASIC3.06□□□□□ -1.92
KRT3P12035 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
KRT3P12035 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
KRT3P12035 AC090740.1-201ENST00000623193 2262 ntBASIC3.05□□□□□ -1.92
KRT3P12035 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
KRT3P12035 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.05□□□□□ -1.92
KRT3P12035 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
KRT3P12035 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
KRT3P12035 MIR208A-201ENST00000362287 71 ntBASIC3.05□□□□□ -1.92
KRT3P12035 RNU6-278P-201ENST00000390945 109 ntBASIC3.05□□□□□ -1.92
KRT3P12035 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.05□□□□□ -1.92
KRT3P12035 MTND2P18-201ENST00000419962 1030 ntBASIC3.05□□□□□ -1.92
KRT3P12035 RPS27AP14-201ENST00000422868 454 ntBASIC3.05□□□□□ -1.92
KRT3P12035 PPP1R11P2-201ENST00000423543 382 ntBASIC3.05□□□□□ -1.92
KRT3P12035 RPL27AP8-201ENST00000424277 446 ntBASIC3.05□□□□□ -1.92
KRT3P12035 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC3.05□□□□□ -1.92
KRT3P12035 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
KRT3P12035 RPL35AP22-201ENST00000436855 335 ntBASIC3.05□□□□□ -1.92
KRT3P12035 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
KRT3P12035 LARP1BP3-201ENST00000437229 869 ntBASIC3.05□□□□□ -1.92
KRT3P12035 AL512286.1-201ENST00000439244 400 ntBASIC3.05□□□□□ -1.92
KRT3P12035 MTND1P30-201ENST00000441241 901 ntBASIC3.05□□□□□ -1.92
KRT3P12035 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.05□□□□□ -1.92
KRT3P12035 BET1P1-201ENST00000482276 359 ntBASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 116.4 ms