Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 AP003355.3-201ENST00000623465 114 ntBASIC4.25□□□□□ -1.73
HLA-DOAP06340 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.25□□□□□ -1.73
HLA-DOAP06340 AC107027.3-201ENST00000565095 3473 ntBASIC4.25□□□□□ -1.73
HLA-DOAP06340 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
HLA-DOAP06340 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
HLA-DOAP06340 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
HLA-DOAP06340 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.24□□□□□ -1.73
HLA-DOAP06340 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
HLA-DOAP06340 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
HLA-DOAP06340 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HLA-DOAP06340 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
HLA-DOAP06340 MIR448-201ENST00000362131 111 ntBASIC4.24□□□□□ -1.73
HLA-DOAP06340 Y_RNA.132-201ENST00000363421 102 ntBASIC4.24□□□□□ -1.73
HLA-DOAP06340 Y_RNA.157-201ENST00000363638 102 ntBASIC4.24□□□□□ -1.73
HLA-DOAP06340 RNY1P12-201ENST00000364251 105 ntBASIC4.24□□□□□ -1.73
HLA-DOAP06340 RNY3P13-201ENST00000365542 102 ntBASIC4.24□□□□□ -1.73
HLA-DOAP06340 MIR490-201ENST00000384865 128 ntBASIC4.24□□□□□ -1.73
HLA-DOAP06340 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
HLA-DOAP06340 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
HLA-DOAP06340 MTHFD2P2-201ENST00000407725 247 ntBASIC4.24□□□□□ -1.73
HLA-DOAP06340 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC4.24□□□□□ -1.73
HLA-DOAP06340 AC018630.2-202ENST00000422992 927 ntBASIC4.24□□□□□ -1.73
HLA-DOAP06340 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC4.24□□□□□ -1.73
HLA-DOAP06340 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC4.24□□□□□ -1.73
HLA-DOAP06340 NDUFB1P1-201ENST00000435191 180 ntBASIC4.24□□□□□ -1.73
HLA-DOAP06340 TIMM9P1-201ENST00000436122 256 ntBASIC4.24□□□□□ -1.73
HLA-DOAP06340 RPS3AP12-201ENST00000443616 753 ntBASIC4.24□□□□□ -1.73
HLA-DOAP06340 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC4.24□□□□□ -1.73
HLA-DOAP06340 RBMY2UP-201ENST00000453474 324 ntBASIC4.24□□□□□ -1.73
HLA-DOAP06340 AC233279.1-201ENST00000455300 423 ntBASIC4.24□□□□□ -1.73
HLA-DOAP06340 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC4.24□□□□□ -1.73
HLA-DOAP06340 RNU7-63P-201ENST00000459054 62 ntBASIC4.24□□□□□ -1.73
HLA-DOAP06340 AC078785.3-201ENST00000476607 425 ntBASIC4.24□□□□□ -1.73
HLA-DOAP06340 AC021382.1-201ENST00000483523 359 ntBASIC4.24□□□□□ -1.73
HLA-DOAP06340 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC4.24□□□□□ -1.73
HLA-DOAP06340 COX7A2P2-201ENST00000505291 250 ntBASIC4.24□□□□□ -1.73
HLA-DOAP06340 AC026784.1-201ENST00000507986 352 ntBASIC4.24□□□□□ -1.73
HLA-DOAP06340 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
HLA-DOAP06340 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC4.24□□□□□ -1.73
HLA-DOAP06340 MYL12AP1-201ENST00000518490 515 ntBASIC4.24□□□□□ -1.73
HLA-DOAP06340 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC4.24□□□□□ -1.73
HLA-DOAP06340 OR4R1P-201ENST00000529879 463 ntBASIC4.24□□□□□ -1.73
HLA-DOAP06340 PDCD5P1-201ENST00000543528 309 ntBASIC4.24□□□□□ -1.73
HLA-DOAP06340 OR4T1P-201ENST00000554933 911 ntBASIC4.24□□□□□ -1.73
HLA-DOAP06340 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC4.24□□□□□ -1.73
HLA-DOAP06340 AC037471.2-201ENST00000564941 598 ntBASIC4.24□□□□□ -1.73
HLA-DOAP06340 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC4.24□□□□□ -1.73
HLA-DOAP06340 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC4.24□□□□□ -1.73
HLA-DOAP06340 GLUD1P4-201ENST00000590914 418 ntBASIC4.24□□□□□ -1.73
HLA-DOAP06340 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC4.24□□□□□ -1.73
HLA-DOAP06340 VN1R80P-201ENST00000597126 338 ntBASIC4.24□□□□□ -1.73
HLA-DOAP06340 AC243960.4-201ENST00000600532 288 ntBASIC4.24□□□□□ -1.73
HLA-DOAP06340 AC068790.3-201ENST00000602988 553 ntBASIC4.24□□□□□ -1.73
HLA-DOAP06340 AL161756.2-201ENST00000604597 246 ntBASIC4.24□□□□□ -1.73
HLA-DOAP06340 AC006077.1-201ENST00000604746 343 ntBASIC4.24□□□□□ -1.73
HLA-DOAP06340 AL121992.2-201ENST00000606262 256 ntBASIC4.24□□□□□ -1.73
HLA-DOAP06340 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC4.24□□□□□ -1.73
HLA-DOAP06340 AL590099.1-201ENST00000615276 138 ntBASIC4.24□□□□□ -1.73
HLA-DOAP06340 AL355365.1-201ENST00000616480 294 ntBASIC4.24□□□□□ -1.73
HLA-DOAP06340 RMST_7.1-201ENST00000621935 268 ntBASIC4.24□□□□□ -1.73
HLA-DOAP06340 AC040168.1-201ENST00000623594 991 ntBASIC4.24□□□□□ -1.73
HLA-DOAP06340 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.24□□□□□ -1.73
HLA-DOAP06340 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
HLA-DOAP06340 AL451142.2-201ENST00000429076 2090 ntBASIC4.24□□□□□ -1.73
HLA-DOAP06340 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HLA-DOAP06340 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HLA-DOAP06340 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
HLA-DOAP06340 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.24□□□□□ -1.73
HLA-DOAP06340 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
HLA-DOAP06340 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
HLA-DOAP06340 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.24□□□□□ -1.73
HLA-DOAP06340 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
HLA-DOAP06340 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
HLA-DOAP06340 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.23□□□□□ -1.73
HLA-DOAP06340 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
HLA-DOAP06340 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
HLA-DOAP06340 OR1S2-201ENST00000302592 978 ntBASIC4.23□□□□□ -1.73
HLA-DOAP06340 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
HLA-DOAP06340 Y_RNA.184-201ENST00000363884 108 ntBASIC4.23□□□□□ -1.73
HLA-DOAP06340 Y_RNA.460-201ENST00000384255 102 ntBASIC4.23□□□□□ -1.73
HLA-DOAP06340 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
HLA-DOAP06340 U3.20-201ENST00000390909 217 ntBASIC4.23□□□□□ -1.73
HLA-DOAP06340 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC4.23□□□□□ -1.73
HLA-DOAP06340 AL136116.1-201ENST00000403591 381 ntBASIC4.23□□□□□ -1.73
HLA-DOAP06340 Y_RNA.615-201ENST00000410769 117 ntBASIC4.23□□□□□ -1.73
HLA-DOAP06340 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC4.23□□□□□ -1.73
HLA-DOAP06340 RPL31P2-201ENST00000413849 377 ntBASIC4.23□□□□□ -1.73
HLA-DOAP06340 SAGE2P-201ENST00000420011 2126 ntBASIC4.23□□□□□ -1.73
HLA-DOAP06340 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC4.23□□□□□ -1.73
HLA-DOAP06340 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
HLA-DOAP06340 RPL35AP12-201ENST00000425362 338 ntBASIC4.23□□□□□ -1.73
HLA-DOAP06340 AC097713.2-201ENST00000430199 356 ntBASIC4.23□□□□□ -1.73
HLA-DOAP06340 ATP5JP1-201ENST00000431631 322 ntBASIC4.23□□□□□ -1.73
HLA-DOAP06340 AC024082.2-201ENST00000434771 238 ntBASIC4.23□□□□□ -1.73
HLA-DOAP06340 AL353748.1-201ENST00000440753 474 ntBASIC4.23□□□□□ -1.73
HLA-DOAP06340 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
HLA-DOAP06340 RPL7P12-201ENST00000446719 750 ntBASIC4.23□□□□□ -1.73
HLA-DOAP06340 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC4.23□□□□□ -1.73
HLA-DOAP06340 RPL32P34-201ENST00000486380 400 ntBASIC4.23□□□□□ -1.73
HLA-DOAP06340 AP003072.2-201ENST00000527756 676 ntBASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms