Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC2.88□□□□□ -1.95
MT-ND1P03886 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.88□□□□□ -1.95
MT-ND1P03886 HMGB1P14-201ENST00000557424 591 ntBASIC2.88□□□□□ -1.95
MT-ND1P03886 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.88□□□□□ -1.95
MT-ND1P03886 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.88□□□□□ -1.95
MT-ND1P03886 AC073544.2-201ENST00000601155 540 ntBASIC2.88□□□□□ -1.95
MT-ND1P03886 AL020997.2-201ENST00000602607 184 ntBASIC2.88□□□□□ -1.95
MT-ND1P03886 AC012119.1-201ENST00000603184 222 ntBASIC2.88□□□□□ -1.95
MT-ND1P03886 AC012360.2-201ENST00000609349 391 ntBASIC2.88□□□□□ -1.95
MT-ND1P03886 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC2.88□□□□□ -1.95
MT-ND1P03886 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.88□□□□□ -1.95
MT-ND1P03886 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.88□□□□□ -1.95
MT-ND1P03886 AC079597.1-201ENST00000624306 508 ntBASIC2.88□□□□□ -1.95
MT-ND1P03886 AC004777.1-201ENST00000624317 287 ntBASIC2.88□□□□□ -1.95
MT-ND1P03886 AC093591.3-201ENST00000634516 308 ntBASIC2.88□□□□□ -1.95
MT-ND1P03886 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.88□□□□□ -1.95
MT-ND1P03886 MIR4275-201ENST00000636486 87 ntBASIC2.88□□□□□ -1.95
MT-ND1P03886 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC2.88□□□□□ -1.95
MT-ND1P03886 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
MT-ND1P03886 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
MT-ND1P03886 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
MT-ND1P03886 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC2.87□□□□□ -1.95
MT-ND1P03886 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.87□□□□□ -1.95
MT-ND1P03886 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
MT-ND1P03886 RNU6-114P-201ENST00000384704 105 ntBASIC2.87□□□□□ -1.95
MT-ND1P03886 MIR134-201ENST00000385258 73 ntBASIC2.87□□□□□ -1.95
MT-ND1P03886 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
MT-ND1P03886 SNORD67-201ENST00000390833 111 ntBASIC2.87□□□□□ -1.95
MT-ND1P03886 RPS20P2-201ENST00000402520 389 ntBASIC2.87□□□□□ -1.95
MT-ND1P03886 CCNG1P1-201ENST00000406783 885 ntBASIC2.87□□□□□ -1.95
MT-ND1P03886 AC078974.1-201ENST00000411597 223 ntBASIC2.87□□□□□ -1.95
MT-ND1P03886 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.87□□□□□ -1.95
MT-ND1P03886 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.87□□□□□ -1.95
MT-ND1P03886 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.87□□□□□ -1.95
MT-ND1P03886 AC090774.1-201ENST00000435925 246 ntBASIC2.87□□□□□ -1.95
MT-ND1P03886 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC2.87□□□□□ -1.95
MT-ND1P03886 CYCSP35-201ENST00000451978 304 ntBASIC2.87□□□□□ -1.95
MT-ND1P03886 SNRPGP9-201ENST00000456025 225 ntBASIC2.87□□□□□ -1.95
MT-ND1P03886 AC092798.1-201ENST00000458542 409 ntBASIC2.87□□□□□ -1.95
MT-ND1P03886 AC008155.2-201ENST00000464337 397 ntBASIC2.87□□□□□ -1.95
MT-ND1P03886 HSPE1P6-201ENST00000479457 291 ntBASIC2.87□□□□□ -1.95
MT-ND1P03886 RN7SL293P-201ENST00000481765 281 ntBASIC2.87□□□□□ -1.95
MT-ND1P03886 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.87□□□□□ -1.95
MT-ND1P03886 RN7SL633P-201ENST00000488974 297 ntBASIC2.87□□□□□ -1.95
MT-ND1P03886 AC034222.1-201ENST00000494052 532 ntBASIC2.87□□□□□ -1.95
MT-ND1P03886 SAP18P1-201ENST00000512058 390 ntBASIC2.87□□□□□ -1.95
MT-ND1P03886 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC2.87□□□□□ -1.95
MT-ND1P03886 Y_RNA.695-201ENST00000516715 107 ntBASIC2.87□□□□□ -1.95
MT-ND1P03886 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC2.87□□□□□ -1.95
MT-ND1P03886 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC2.87□□□□□ -1.95
MT-ND1P03886 MEG8-218ENST00000556720 456 ntTSL 3 BASIC2.87□□□□□ -1.95
MT-ND1P03886 NCAPGP2-201ENST00000557911 754 ntBASIC2.87□□□□□ -1.95
MT-ND1P03886 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.87□□□□□ -1.95
MT-ND1P03886 CKS1BP3-201ENST00000600888 237 ntBASIC2.87□□□□□ -1.95
MT-ND1P03886 AL391813.2-201ENST00000609113 322 ntBASIC2.87□□□□□ -1.95
MT-ND1P03886 TEX41-300ENST00000631048 69 ntTSL 5 BASIC2.87□□□□□ -1.95
MT-ND1P03886 FAM35CP-201ENST00000554755 2470 ntBASIC2.87□□□□□ -1.95
MT-ND1P03886 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.87□□□□□ -1.95
MT-ND1P03886 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
MT-ND1P03886 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.87□□□□□ -1.95
MT-ND1P03886 SDAD1P2-201ENST00000441308 2028 ntBASIC2.86□□□□□ -1.95
MT-ND1P03886 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
MT-ND1P03886 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.86□□□□□ -1.95
MT-ND1P03886 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
MT-ND1P03886 OR1S2-201ENST00000302592 978 ntBASIC2.86□□□□□ -1.95
MT-ND1P03886 Y_RNA.46-201ENST00000362695 102 ntBASIC2.86□□□□□ -1.95
MT-ND1P03886 SNORA62.3-201ENST00000365110 153 ntBASIC2.86□□□□□ -1.95
MT-ND1P03886 Y_RNA.318-201ENST00000365131 97 ntBASIC2.86□□□□□ -1.95
MT-ND1P03886 RNU5E-5P-201ENST00000365379 116 ntBASIC2.86□□□□□ -1.95
MT-ND1P03886 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
MT-ND1P03886 RN7SKP142-201ENST00000411236 328 ntBASIC2.86□□□□□ -1.95
MT-ND1P03886 BTF3L4P1-201ENST00000413813 468 ntBASIC2.86□□□□□ -1.95
MT-ND1P03886 ATG3P1-201ENST00000419507 911 ntBASIC2.86□□□□□ -1.95
MT-ND1P03886 NDUFB4P7-201ENST00000423198 363 ntBASIC2.86□□□□□ -1.95
MT-ND1P03886 AL356583.2-201ENST00000426536 280 ntBASIC2.86□□□□□ -1.95
MT-ND1P03886 OR4K11P-201ENST00000431829 904 ntBASIC2.86□□□□□ -1.95
MT-ND1P03886 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC2.86□□□□□ -1.95
MT-ND1P03886 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
MT-ND1P03886 MTCO1P19-201ENST00000443487 500 ntBASIC2.86□□□□□ -1.95
MT-ND1P03886 COX6CP2-201ENST00000444980 225 ntBASIC2.86□□□□□ -1.95
MT-ND1P03886 AC009237.8-201ENST00000445492 379 ntBASIC2.86□□□□□ -1.95
MT-ND1P03886 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
MT-ND1P03886 RPS29P12-201ENST00000460178 152 ntBASIC2.86□□□□□ -1.95
MT-ND1P03886 MTND4LP3-201ENST00000468320 276 ntBASIC2.86□□□□□ -1.95
MT-ND1P03886 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.86□□□□□ -1.95
MT-ND1P03886 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.86□□□□□ -1.95
MT-ND1P03886 AC022447.1-201ENST00000515358 464 ntBASIC2.86□□□□□ -1.95
MT-ND1P03886 RNU6-1003P-201ENST00000517099 105 ntBASIC2.86□□□□□ -1.95
MT-ND1P03886 OR5G4P-201ENST00000525251 760 ntBASIC2.86□□□□□ -1.95
MT-ND1P03886 MTND4LP18-201ENST00000526864 291 ntBASIC2.86□□□□□ -1.95
MT-ND1P03886 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC2.86□□□□□ -1.95
MT-ND1P03886 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.86□□□□□ -1.95
MT-ND1P03886 AC125611.2-201ENST00000551907 647 ntBASIC2.86□□□□□ -1.95
MT-ND1P03886 ZNF519P3-201ENST00000557158 1032 ntBASIC2.86□□□□□ -1.95
MT-ND1P03886 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC2.86□□□□□ -1.95
MT-ND1P03886 AC034105.4-201ENST00000568304 277 ntBASIC2.86□□□□□ -1.95
MT-ND1P03886 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.86□□□□□ -1.95
MT-ND1P03886 NBR2-204ENST00000587322 63 ntBASIC2.86□□□□□ -1.95
MT-ND1P03886 RSL24D1P11-201ENST00000591045 491 ntBASIC2.86□□□□□ -1.95
MT-ND1P03886 RN7SKP299-201ENST00000606679 301 ntBASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms