Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC1.11□□□□□ -2.23
SPTA1P02549 SETP2-201ENST00000553886 926 ntBASIC1.11□□□□□ -2.23
SPTA1P02549 AC084757.1-201ENST00000559987 490 ntBASIC1.11□□□□□ -2.23
SPTA1P02549 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC1.11□□□□□ -2.23
SPTA1P02549 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC1.11□□□□□ -2.23
SPTA1P02549 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.11□□□□□ -2.23
SPTA1P02549 ZNF33CP-201ENST00000432492 2030 ntBASIC1.11□□□□□ -2.23
SPTA1P02549 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC1.11□□□□□ -2.23
SPTA1P02549 AC007098.1-201ENST00000420122 367 ntBASIC1.1□□□□□ -2.23
SPTA1P02549 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC1.1□□□□□ -2.23
SPTA1P02549 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC1.1□□□□□ -2.23
SPTA1P02549 ARL2BPP4-201ENST00000506854 471 ntBASIC1.1□□□□□ -2.23
SPTA1P02549 OR5AQ1P-201ENST00000527596 927 ntBASIC1.1□□□□□ -2.23
SPTA1P02549 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC1.1□□□□□ -2.23
SPTA1P02549 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.1□□□□□ -2.23
SPTA1P02549 AL135786.2-201ENST00000608422 615 ntBASIC1.1□□□□□ -2.23
SPTA1P02549 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.1□□□□□ -2.23
SPTA1P02549 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.1□□□□□ -2.23
SPTA1P02549 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
SPTA1P02549 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
SPTA1P02549 RNU6-115P-201ENST00000364310 107 ntBASIC1.1□□□□□ -2.23
SPTA1P02549 AC092447.6-201ENST00000414578 210 ntBASIC1.1□□□□□ -2.23
SPTA1P02549 RPL27AP8-201ENST00000424277 446 ntBASIC1.1□□□□□ -2.23
SPTA1P02549 ELOCP10-201ENST00000440624 327 ntBASIC1.1□□□□□ -2.23
SPTA1P02549 SNRPGP13-201ENST00000442212 177 ntBASIC1.1□□□□□ -2.23
SPTA1P02549 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC1.1□□□□□ -2.23
SPTA1P02549 RNA5SP364-201ENST00000516938 78 ntBASIC1.1□□□□□ -2.23
SPTA1P02549 AC121758.2-201ENST00000553271 193 ntBASIC1.1□□□□□ -2.23
SPTA1P02549 AL138976.2-201ENST00000563989 694 ntBASIC1.1□□□□□ -2.23
SPTA1P02549 AC005498.1-201ENST00000592125 465 ntBASIC1.1□□□□□ -2.23
SPTA1P02549 AC005034.5-201ENST00000604219 466 ntBASIC1.1□□□□□ -2.23
SPTA1P02549 ELOCP34-201ENST00000604436 327 ntBASIC1.1□□□□□ -2.23
SPTA1P02549 AC108706.1-201ENST00000611053 297 ntBASIC1.1□□□□□ -2.23
SPTA1P02549 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC1.1□□□□□ -2.23
SPTA1P02549 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.1□□□□□ -2.23
SPTA1P02549 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC1.1□□□□□ -2.23
SPTA1P02549 AP002907.1-201ENST00000606361 1430 ntBASIC1.1□□□□□ -2.23
SPTA1P02549 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.09□□□□□ -2.23
SPTA1P02549 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC1.09□□□□□ -2.23
SPTA1P02549 Y_RNA.412-201ENST00000384001 104 ntBASIC1.09□□□□□ -2.23
SPTA1P02549 AL589994.1-201ENST00000404962 340 ntBASIC1.09□□□□□ -2.23
SPTA1P02549 Z75741.2-201ENST00000417272 1167 ntBASIC1.09□□□□□ -2.23
SPTA1P02549 SNRPEP10-201ENST00000420249 274 ntBASIC1.09□□□□□ -2.23
SPTA1P02549 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC1.09□□□□□ -2.23
SPTA1P02549 AC110792.2-201ENST00000510278 224 ntBASIC1.09□□□□□ -2.23
SPTA1P02549 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC1.09□□□□□ -2.23
SPTA1P02549 HSPE1P20-201ENST00000538133 289 ntBASIC1.09□□□□□ -2.23
SPTA1P02549 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC1.09□□□□□ -2.23
SPTA1P02549 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC1.09□□□□□ -2.24
SPTA1P02549 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC1.09□□□□□ -2.24
SPTA1P02549 HMGN2P20-201ENST00000437531 273 ntBASIC1.09□□□□□ -2.24
SPTA1P02549 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC1.09□□□□□ -2.24
SPTA1P02549 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC1.09□□□□□ -2.24
SPTA1P02549 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.09□□□□□ -2.24
SPTA1P02549 AC091057.2-201ENST00000602594 792 ntBASIC1.09□□□□□ -2.24
SPTA1P02549 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC1.09□□□□□ -2.24
SPTA1P02549 AC090740.1-201ENST00000623193 2262 ntBASIC1.09□□□□□ -2.24
SPTA1P02549 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
SPTA1P02549 Y_RNA.518-201ENST00000384552 113 ntBASIC1.08□□□□□ -2.24
SPTA1P02549 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
SPTA1P02549 AP000567.1-201ENST00000406413 156 ntBASIC1.08□□□□□ -2.24
SPTA1P02549 AC008850.1-201ENST00000427546 362 ntBASIC1.08□□□□□ -2.24
SPTA1P02549 AL031659.1-201ENST00000447075 539 ntBASIC1.08□□□□□ -2.24
SPTA1P02549 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC1.08□□□□□ -2.24
SPTA1P02549 AC069277.2-201ENST00000454211 432 ntBASIC1.08□□□□□ -2.24
SPTA1P02549 AK3P2-201ENST00000507976 429 ntBASIC1.08□□□□□ -2.24
SPTA1P02549 RNA5SP384-201ENST00000516615 116 ntBASIC1.08□□□□□ -2.24
SPTA1P02549 RN7SKP5-201ENST00000517045 272 ntBASIC1.08□□□□□ -2.24
SPTA1P02549 MIR6840-201ENST00000611937 71 ntBASIC1.08□□□□□ -2.24
SPTA1P02549 AL445493.3-201ENST00000619568 477 ntBASIC1.08□□□□□ -2.24
SPTA1P02549 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.08□□□□□ -2.24
SPTA1P02549 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
SPTA1P02549 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC1.08□□□□□ -2.24
SPTA1P02549 RNA5SP167-201ENST00000365461 116 ntBASIC1.08□□□□□ -2.24
SPTA1P02549 RNA5SP465-201ENST00000391195 109 ntBASIC1.08□□□□□ -2.24
SPTA1P02549 BX682237.1-201ENST00000415016 335 ntBASIC1.08□□□□□ -2.24
SPTA1P02549 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.08□□□□□ -2.24
SPTA1P02549 AC004941.2-201ENST00000427009 228 ntBASIC1.08□□□□□ -2.24
SPTA1P02549 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC1.08□□□□□ -2.24
SPTA1P02549 RPL37P6-202ENST00000464216 403 ntBASIC1.08□□□□□ -2.24
SPTA1P02549 AC010627.1-201ENST00000503819 1294 ntBASIC1.08□□□□□ -2.24
SPTA1P02549 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.08□□□□□ -2.24
SPTA1P02549 SNORD39.2-201ENST00000579995 76 ntBASIC1.08□□□□□ -2.24
SPTA1P02549 GAS5-AS1-201ENST00000602767 694 ntBASIC1.08□□□□□ -2.24
SPTA1P02549 AC111188.2-201ENST00000529697 1387 ntBASIC1.08□□□□□ -2.24
SPTA1P02549 SNORD114-23-201ENST00000363536 72 ntBASIC1.07□□□□□ -2.24
SPTA1P02549 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC1.07□□□□□ -2.24
SPTA1P02549 RNU6-225P-201ENST00000384613 103 ntBASIC1.07□□□□□ -2.24
SPTA1P02549 AC241520.1-201ENST00000422654 1099 ntBASIC1.07□□□□□ -2.24
SPTA1P02549 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.07□□□□□ -2.24
SPTA1P02549 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC1.07□□□□□ -2.24
SPTA1P02549 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
SPTA1P02549 AL031775.1-201ENST00000607014 887 ntBASIC1.07□□□□□ -2.24
SPTA1P02549 AC006065.5-201ENST00000623427 349 ntBASIC1.07□□□□□ -2.24
SPTA1P02549 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC1.07□□□□□ -2.24
SPTA1P02549 MORF4L1P7-201ENST00000426038 703 ntBASIC1.07□□□□□ -2.24
SPTA1P02549 RPL21P131-201ENST00000497298 483 ntBASIC1.07□□□□□ -2.24
SPTA1P02549 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC1.07□□□□□ -2.24
SPTA1P02549 MIR514B-201ENST00000516774 80 ntBASIC1.07□□□□□ -2.24
SPTA1P02549 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC1.07□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms