Protein–RNA interactions for Protein: P02461

COL3A1, Collagen alpha-1(III) chain, humanhuman

Predicted RBP Predictions only

Length 1,466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1P02461 RN7SKP220-201ENST00000410611 288 ntBASIC4.1□□□□□ -1.75
COL3A1P02461 Y_RNA.608-201ENST00000410647 95 ntBASIC4.1□□□□□ -1.75
COL3A1P02461 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC4.1□□□□□ -1.75
COL3A1P02461 ISCA1P6-201ENST00000427740 390 ntBASIC4.1□□□□□ -1.75
COL3A1P02461 AC109583.1-201ENST00000432156 268 ntBASIC4.1□□□□□ -1.75
COL3A1P02461 TAAR7P-201ENST00000436141 242 ntBASIC4.1□□□□□ -1.75
COL3A1P02461 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
COL3A1P02461 UBE2V1P5-201ENST00000440070 405 ntBASIC4.1□□□□□ -1.75
COL3A1P02461 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.1□□□□□ -1.75
COL3A1P02461 IGKV1OR-3-201ENST00000446944 348 ntBASIC4.1□□□□□ -1.75
COL3A1P02461 AC132479.1-201ENST00000449160 144 ntBASIC4.1□□□□□ -1.75
COL3A1P02461 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC4.1□□□□□ -1.75
COL3A1P02461 C1DP4-201ENST00000455429 424 ntBASIC4.1□□□□□ -1.75
COL3A1P02461 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC4.1□□□□□ -1.75
COL3A1P02461 NF1P3-201ENST00000457709 450 ntBASIC4.1□□□□□ -1.75
COL3A1P02461 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC4.1□□□□□ -1.75
COL3A1P02461 RN7SL20P-201ENST00000488827 297 ntBASIC4.1□□□□□ -1.75
COL3A1P02461 KLRA1P-201ENST00000503499 986 ntBASIC4.1□□□□□ -1.75
COL3A1P02461 AC138409.2-202ENST00000507274 458 ntBASIC4.1□□□□□ -1.75
COL3A1P02461 POU5F1P7-201ENST00000508759 541 ntBASIC4.1□□□□□ -1.75
COL3A1P02461 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC4.1□□□□□ -1.75
COL3A1P02461 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC4.1□□□□□ -1.75
COL3A1P02461 AP003467.2-201ENST00000520175 319 ntBASIC4.1□□□□□ -1.75
COL3A1P02461 AC243972.3-201ENST00000539655 198 ntBASIC4.1□□□□□ -1.75
COL3A1P02461 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC4.1□□□□□ -1.75
COL3A1P02461 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC4.1□□□□□ -1.75
COL3A1P02461 AL845331.3-202ENST00000562856 261 ntBASIC4.1□□□□□ -1.75
COL3A1P02461 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC4.1□□□□□ -1.75
COL3A1P02461 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC4.1□□□□□ -1.75
COL3A1P02461 AC106900.2-201ENST00000604994 317 ntBASIC4.1□□□□□ -1.75
COL3A1P02461 AC107294.1-201ENST00000609524 467 ntBASIC4.1□□□□□ -1.75
COL3A1P02461 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
COL3A1P02461 ELL2P4-201ENST00000446870 1376 ntBASIC4.1□□□□□ -1.75
COL3A1P02461 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC4.1□□□□□ -1.75
COL3A1P02461 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
COL3A1P02461 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.09□□□□□ -1.75
COL3A1P02461 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
COL3A1P02461 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
COL3A1P02461 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC4.09□□□□□ -1.75
COL3A1P02461 Y_RNA.166-201ENST00000363730 102 ntBASIC4.09□□□□□ -1.75
COL3A1P02461 Y_RNA.422-201ENST00000384054 114 ntBASIC4.09□□□□□ -1.75
COL3A1P02461 RN7SKP284-201ENST00000411002 343 ntBASIC4.09□□□□□ -1.75
COL3A1P02461 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC4.09□□□□□ -1.75
COL3A1P02461 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC4.09□□□□□ -1.75
COL3A1P02461 RPL23AP22-201ENST00000437556 453 ntBASIC4.09□□□□□ -1.75
COL3A1P02461 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC4.09□□□□□ -1.75
COL3A1P02461 AL136097.1-201ENST00000456945 913 ntBASIC4.09□□□□□ -1.75
COL3A1P02461 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC4.09□□□□□ -1.75
COL3A1P02461 RNU6-583P-201ENST00000516012 92 ntBASIC4.09□□□□□ -1.75
COL3A1P02461 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC4.09□□□□□ -1.75
COL3A1P02461 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC4.09□□□□□ -1.75
COL3A1P02461 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.09□□□□□ -1.75
COL3A1P02461 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC4.09□□□□□ -1.75
COL3A1P02461 MIR548Y-201ENST00000582739 110 ntBASIC4.09□□□□□ -1.75
COL3A1P02461 AC006504.6-201ENST00000590142 199 ntBASIC4.09□□□□□ -1.75
COL3A1P02461 AC124312.5-201ENST00000604451 268 ntBASIC4.09□□□□□ -1.75
COL3A1P02461 AL451049.1-201ENST00000608672 497 ntBASIC4.09□□□□□ -1.75
COL3A1P02461 AC093788.1-201ENST00000609356 927 ntBASIC4.09□□□□□ -1.75
COL3A1P02461 AC099506.2-201ENST00000623074 221 ntBASIC4.09□□□□□ -1.75
COL3A1P02461 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC4.09□□□□□ -1.75
COL3A1P02461 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
COL3A1P02461 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
COL3A1P02461 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
COL3A1P02461 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
COL3A1P02461 AC046144.1-201ENST00000478559 1853 ntBASIC4.09□□□□□ -1.76
COL3A1P02461 AL451142.2-201ENST00000429076 2090 ntBASIC4.08□□□□□ -1.76
COL3A1P02461 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
COL3A1P02461 MTCO1P9-201ENST00000505577 1534 ntBASIC4.08□□□□□ -1.76
COL3A1P02461 AL049555.1-201ENST00000562834 1933 ntBASIC4.08□□□□□ -1.76
COL3A1P02461 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC4.08□□□□□ -1.76
COL3A1P02461 RNA5SP432-201ENST00000362480 116 ntBASIC4.08□□□□□ -1.76
COL3A1P02461 RNY3P3-201ENST00000363816 102 ntBASIC4.08□□□□□ -1.76
COL3A1P02461 Y_RNA.216-201ENST00000364205 93 ntBASIC4.08□□□□□ -1.76
COL3A1P02461 RNU1-140P-201ENST00000365040 165 ntBASIC4.08□□□□□ -1.76
COL3A1P02461 IARS-201ENST00000375627 697 ntTSL 3 BASIC4.08□□□□□ -1.76
COL3A1P02461 RNU6-908P-201ENST00000410160 94 ntBASIC4.08□□□□□ -1.76
COL3A1P02461 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC4.08□□□□□ -1.76
COL3A1P02461 AC004987.3-201ENST00000413879 771 ntBASIC4.08□□□□□ -1.76
COL3A1P02461 RAC1P3-201ENST00000416129 580 ntBASIC4.08□□□□□ -1.76
COL3A1P02461 SPA17P1-201ENST00000416656 452 ntBASIC4.08□□□□□ -1.76
COL3A1P02461 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC4.08□□□□□ -1.76
COL3A1P02461 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC4.08□□□□□ -1.76
COL3A1P02461 PDCL2P1-201ENST00000419302 352 ntBASIC4.08□□□□□ -1.76
COL3A1P02461 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC4.08□□□□□ -1.76
COL3A1P02461 AC133473.1-201ENST00000455173 299 ntBASIC4.08□□□□□ -1.76
COL3A1P02461 RPL36AP51-201ENST00000487216 318 ntBASIC4.08□□□□□ -1.76
COL3A1P02461 AC112204.1-201ENST00000502591 103 ntBASIC4.08□□□□□ -1.76
COL3A1P02461 AC097462.2-201ENST00000504623 481 ntBASIC4.08□□□□□ -1.76
COL3A1P02461 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC4.08□□□□□ -1.76
COL3A1P02461 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC4.08□□□□□ -1.76
COL3A1P02461 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC4.08□□□□□ -1.76
COL3A1P02461 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC4.08□□□□□ -1.76
COL3A1P02461 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC4.08□□□□□ -1.76
COL3A1P02461 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC4.08□□□□□ -1.76
COL3A1P02461 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC4.08□□□□□ -1.76
COL3A1P02461 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC4.08□□□□□ -1.76
COL3A1P02461 AL355375.2-201ENST00000574825 175 ntBASIC4.08□□□□□ -1.76
COL3A1P02461 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC4.08□□□□□ -1.76
COL3A1P02461 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC4.08□□□□□ -1.76
COL3A1P02461 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 120.4 ms