Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.87□□□□□ -2.11
COL1A1P02452 XIAPP1-201ENST00000603162 600 ntBASIC1.87□□□□□ -2.11
COL1A1P02452 AC117490.2-201ENST00000610042 594 ntBASIC1.87□□□□□ -2.11
COL1A1P02452 RMST_6.1-201ENST00000611980 203 ntBASIC1.87□□□□□ -2.11
COL1A1P02452 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
COL1A1P02452 SNORD114-22-201ENST00000365423 72 ntBASIC1.86□□□□□ -2.11
COL1A1P02452 Y_RNA.354-201ENST00000365448 111 ntBASIC1.86□□□□□ -2.11
COL1A1P02452 ANAPC10P1-201ENST00000395991 556 ntBASIC1.86□□□□□ -2.11
COL1A1P02452 AC006548.1-201ENST00000427470 102 ntBASIC1.86□□□□□ -2.11
COL1A1P02452 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC1.86□□□□□ -2.11
COL1A1P02452 AL034418.1-201ENST00000448675 860 ntBASIC1.86□□□□□ -2.11
COL1A1P02452 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC1.86□□□□□ -2.11
COL1A1P02452 AC090515.1-201ENST00000465295 476 ntBASIC1.86□□□□□ -2.11
COL1A1P02452 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
COL1A1P02452 RNF138P1-201ENST00000502765 546 ntBASIC1.86□□□□□ -2.11
COL1A1P02452 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC1.86□□□□□ -2.11
COL1A1P02452 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC1.86□□□□□ -2.11
COL1A1P02452 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC1.86□□□□□ -2.11
COL1A1P02452 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC1.86□□□□□ -2.11
COL1A1P02452 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.86□□□□□ -2.11
COL1A1P02452 AL355812.1-201ENST00000603215 216 ntBASIC1.86□□□□□ -2.11
COL1A1P02452 CR381572.1-201ENST00000625098 102 ntBASIC1.86□□□□□ -2.11
COL1A1P02452 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC1.86□□□□□ -2.11
COL1A1P02452 AC131280.1-202ENST00000624067 4211 ntBASIC1.85□□□□□ -2.11
COL1A1P02452 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.85□□□□□ -2.11
COL1A1P02452 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
COL1A1P02452 RNU6-386P-201ENST00000362650 107 ntBASIC1.85□□□□□ -2.11
COL1A1P02452 SNORA7.1-201ENST00000363750 139 ntBASIC1.85□□□□□ -2.11
COL1A1P02452 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC1.85□□□□□ -2.11
COL1A1P02452 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.85□□□□□ -2.11
COL1A1P02452 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC1.85□□□□□ -2.11
COL1A1P02452 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC1.85□□□□□ -2.11
COL1A1P02452 AC006499.2-201ENST00000513470 337 ntBASIC1.85□□□□□ -2.11
COL1A1P02452 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC1.85□□□□□ -2.11
COL1A1P02452 AC087272.1-201ENST00000523624 533 ntBASIC1.85□□□□□ -2.11
COL1A1P02452 AC011604.1-201ENST00000545978 196 ntBASIC1.85□□□□□ -2.11
COL1A1P02452 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC1.85□□□□□ -2.11
COL1A1P02452 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC1.85□□□□□ -2.11
COL1A1P02452 ANP32BP3-201ENST00000559213 706 ntBASIC1.85□□□□□ -2.11
COL1A1P02452 DPRXP5-201ENST00000604662 539 ntBASIC1.85□□□□□ -2.11
COL1A1P02452 BNIP3P7-201ENST00000605641 516 ntBASIC1.85□□□□□ -2.11
COL1A1P02452 MIR6515-201ENST00000619843 57 ntBASIC1.85□□□□□ -2.11
COL1A1P02452 AC110079.1-202ENST00000635213 138 ntBASIC1.85□□□□□ -2.11
COL1A1P02452 MIR3199-2-201ENST00000636243 86 ntBASIC1.85□□□□□ -2.11
COL1A1P02452 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
COL1A1P02452 RNU6-1249P-201ENST00000363237 111 ntBASIC1.84□□□□□ -2.11
COL1A1P02452 RPL7P30-201ENST00000420888 709 ntBASIC1.84□□□□□ -2.11
COL1A1P02452 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC1.84□□□□□ -2.11
COL1A1P02452 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.84□□□□□ -2.11
COL1A1P02452 AC007395.1-201ENST00000451333 677 ntBASIC1.84□□□□□ -2.11
COL1A1P02452 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC1.84□□□□□ -2.11
COL1A1P02452 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC1.84□□□□□ -2.11
COL1A1P02452 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC1.84□□□□□ -2.11
COL1A1P02452 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC1.84□□□□□ -2.11
COL1A1P02452 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC1.84□□□□□ -2.11
COL1A1P02452 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.84□□□□□ -2.11
COL1A1P02452 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.84□□□□□ -2.11
COL1A1P02452 MIR5694-201ENST00000581190 76 ntBASIC1.84□□□□□ -2.11
COL1A1P02452 AL136363.1-201ENST00000605349 337 ntBASIC1.84□□□□□ -2.11
COL1A1P02452 AL360181.4-201ENST00000621752 134 ntBASIC1.84□□□□□ -2.11
COL1A1P02452 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.84□□□□□ -2.11
COL1A1P02452 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC1.84□□□□□ -2.11
COL1A1P02452 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC1.84□□□□□ -2.12
COL1A1P02452 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
COL1A1P02452 RNA5SP258-201ENST00000362750 119 ntBASIC1.83□□□□□ -2.12
COL1A1P02452 SNORA67.1-201ENST00000364749 141 ntBASIC1.83□□□□□ -2.12
COL1A1P02452 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC1.83□□□□□ -2.12
COL1A1P02452 TMEM167AP1-201ENST00000423409 219 ntBASIC1.83□□□□□ -2.12
COL1A1P02452 AL513185.2-201ENST00000425543 193 ntBASIC1.83□□□□□ -2.12
COL1A1P02452 AL645638.1-201ENST00000440519 361 ntBASIC1.83□□□□□ -2.12
COL1A1P02452 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC1.83□□□□□ -2.12
COL1A1P02452 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.83□□□□□ -2.12
COL1A1P02452 RPS29P29-201ENST00000456396 171 ntBASIC1.83□□□□□ -2.12
COL1A1P02452 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC1.83□□□□□ -2.12
COL1A1P02452 AC022616.2-201ENST00000523185 300 ntBASIC1.83□□□□□ -2.12
COL1A1P02452 OR4R1P-201ENST00000529879 463 ntBASIC1.83□□□□□ -2.12
COL1A1P02452 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
COL1A1P02452 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
COL1A1P02452 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC1.83□□□□□ -2.12
COL1A1P02452 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC1.83□□□□□ -2.12
COL1A1P02452 PABPC1P9-201ENST00000426076 1612 ntBASIC1.83□□□□□ -2.12
COL1A1P02452 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC1.83□□□□□ -2.12
COL1A1P02452 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
COL1A1P02452 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC1.83□□□□□ -2.12
COL1A1P02452 ZNF209P-201ENST00000593450 2304 ntBASIC1.83□□□□□ -2.12
COL1A1P02452 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
COL1A1P02452 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
COL1A1P02452 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC1.82□□□□□ -2.12
COL1A1P02452 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
COL1A1P02452 RNU6-342P-201ENST00000384521 104 ntBASIC1.82□□□□□ -2.12
COL1A1P02452 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC1.82□□□□□ -2.12
COL1A1P02452 MTND2P29-201ENST00000438595 412 ntBASIC1.82□□□□□ -2.12
COL1A1P02452 RBM43P1-201ENST00000476891 1081 ntBASIC1.82□□□□□ -2.12
COL1A1P02452 RPS15AP34-201ENST00000487776 387 ntBASIC1.82□□□□□ -2.12
COL1A1P02452 AC008526.1-201ENST00000509149 338 ntBASIC1.82□□□□□ -2.12
COL1A1P02452 LY96-202ENST00000518893 430 ntTSL 3 BASIC1.82□□□□□ -2.12
COL1A1P02452 AC025857.1-201ENST00000525252 377 ntBASIC1.82□□□□□ -2.12
COL1A1P02452 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC1.82□□□□□ -2.12
COL1A1P02452 SNRPGP16-201ENST00000533275 226 ntBASIC1.82□□□□□ -2.12
COL1A1P02452 AL669831.4-202ENST00000590817 238 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 141.8 ms