Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
CTDNEP1O95476 AC099786.3-201ENST00000565735 1410 ntBASIC2.48□□□□□ -2.01
CTDNEP1O95476 AC026241.1-201ENST00000517873 2142 ntBASIC2.48□□□□□ -2.01
CTDNEP1O95476 MTCO1P23-201ENST00000415223 1526 ntBASIC2.47□□□□□ -2.01
CTDNEP1O95476 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.47□□□□□ -2.01
CTDNEP1O95476 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
CTDNEP1O95476 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC2.47□□□□□ -2.01
CTDNEP1O95476 RNU6-636P-201ENST00000384598 107 ntBASIC2.47□□□□□ -2.01
CTDNEP1O95476 SNORA48.3-201ENST00000391081 134 ntBASIC2.47□□□□□ -2.01
CTDNEP1O95476 RNA5SP252-201ENST00000391131 119 ntBASIC2.47□□□□□ -2.01
CTDNEP1O95476 SLC9B1P2-201ENST00000398120 1184 ntBASIC2.47□□□□□ -2.01
CTDNEP1O95476 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
CTDNEP1O95476 AC007064.1-201ENST00000412238 351 ntBASIC2.47□□□□□ -2.01
CTDNEP1O95476 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC2.47□□□□□ -2.01
CTDNEP1O95476 RPS15AP38-201ENST00000413110 372 ntBASIC2.47□□□□□ -2.01
CTDNEP1O95476 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.47□□□□□ -2.01
CTDNEP1O95476 AC079780.1-201ENST00000428259 207 ntBASIC2.47□□□□□ -2.01
CTDNEP1O95476 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC2.47□□□□□ -2.01
CTDNEP1O95476 FGF7P5-201ENST00000441829 291 ntBASIC2.47□□□□□ -2.01
CTDNEP1O95476 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC2.47□□□□□ -2.01
CTDNEP1O95476 PTENP1-201ENST00000447117 1215 ntBASIC2.47□□□□□ -2.01
CTDNEP1O95476 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC2.47□□□□□ -2.01
CTDNEP1O95476 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.47□□□□□ -2.01
CTDNEP1O95476 MTCYBP17-201ENST00000503579 789 ntBASIC2.47□□□□□ -2.01
CTDNEP1O95476 AC091951.3-201ENST00000504093 246 ntBASIC2.47□□□□□ -2.01
CTDNEP1O95476 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC2.47□□□□□ -2.01
CTDNEP1O95476 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC2.47□□□□□ -2.01
CTDNEP1O95476 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC2.47□□□□□ -2.01
CTDNEP1O95476 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.47□□□□□ -2.01
CTDNEP1O95476 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC2.47□□□□□ -2.01
CTDNEP1O95476 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
CTDNEP1O95476 SLC2A13P1-201ENST00000531560 322 ntBASIC2.47□□□□□ -2.01
CTDNEP1O95476 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC2.47□□□□□ -2.01
CTDNEP1O95476 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
CTDNEP1O95476 AC008127.2-201ENST00000549925 1075 ntBASIC2.47□□□□□ -2.01
CTDNEP1O95476 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.47□□□□□ -2.01
CTDNEP1O95476 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
CTDNEP1O95476 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.47□□□□□ -2.01
CTDNEP1O95476 FAM60BP-201ENST00000578364 658 ntBASIC2.47□□□□□ -2.01
CTDNEP1O95476 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC2.47□□□□□ -2.01
CTDNEP1O95476 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.47□□□□□ -2.01
CTDNEP1O95476 AC106900.2-201ENST00000604994 317 ntBASIC2.47□□□□□ -2.01
CTDNEP1O95476 AC131235.4-201ENST00000609288 620 ntBASIC2.47□□□□□ -2.01
CTDNEP1O95476 AC023510.2-201ENST00000622162 746 ntBASIC2.47□□□□□ -2.01
CTDNEP1O95476 AC040168.1-201ENST00000623594 991 ntBASIC2.47□□□□□ -2.01
CTDNEP1O95476 IGHVIII-44-202ENST00000636235 289 ntBASIC2.47□□□□□ -2.01
CTDNEP1O95476 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
CTDNEP1O95476 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.47□□□□□ -2.01
CTDNEP1O95476 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
CTDNEP1O95476 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
CTDNEP1O95476 SLC10A5P1-201ENST00000379063 1306 ntBASIC2.46□□□□□ -2.02
CTDNEP1O95476 NUP58P1-201ENST00000502546 1738 ntBASIC2.46□□□□□ -2.02
CTDNEP1O95476 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.46□□□□□ -2.02
CTDNEP1O95476 MIRLET7G-201ENST00000362280 84 ntBASIC2.46□□□□□ -2.02
CTDNEP1O95476 RNA5SP160-201ENST00000364866 120 ntBASIC2.46□□□□□ -2.02
CTDNEP1O95476 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
CTDNEP1O95476 AL139156.1-201ENST00000412785 841 ntBASIC2.46□□□□□ -2.02
CTDNEP1O95476 COX7BP2-201ENST00000437976 242 ntBASIC2.46□□□□□ -2.02
CTDNEP1O95476 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC2.46□□□□□ -2.02
CTDNEP1O95476 RPL39P6-201ENST00000448289 150 ntBASIC2.46□□□□□ -2.02
CTDNEP1O95476 RPL23AP7-203ENST00000449021 469 ntBASIC2.46□□□□□ -2.02
CTDNEP1O95476 USP9YP34-201ENST00000453983 808 ntBASIC2.46□□□□□ -2.02
CTDNEP1O95476 RPL18AP17-201ENST00000455326 198 ntBASIC2.46□□□□□ -2.02
CTDNEP1O95476 RPS20P24-201ENST00000457473 361 ntBASIC2.46□□□□□ -2.02
CTDNEP1O95476 UBE2DNL-203ENST00000474922 222 ntBASIC2.46□□□□□ -2.02
CTDNEP1O95476 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC2.46□□□□□ -2.02
CTDNEP1O95476 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
CTDNEP1O95476 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC2.46□□□□□ -2.02
CTDNEP1O95476 RPPH1-2P-201ENST00000516688 293 ntBASIC2.46□□□□□ -2.02
CTDNEP1O95476 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC2.46□□□□□ -2.02
CTDNEP1O95476 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC2.46□□□□□ -2.02
CTDNEP1O95476 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.46□□□□□ -2.02
CTDNEP1O95476 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC2.46□□□□□ -2.02
CTDNEP1O95476 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.46□□□□□ -2.02
CTDNEP1O95476 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC2.46□□□□□ -2.02
CTDNEP1O95476 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.46□□□□□ -2.02
CTDNEP1O95476 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.46□□□□□ -2.02
CTDNEP1O95476 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC2.46□□□□□ -2.02
CTDNEP1O95476 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC2.46□□□□□ -2.02
CTDNEP1O95476 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC2.46□□□□□ -2.02
CTDNEP1O95476 AC026464.5-201ENST00000562497 722 ntBASIC2.46□□□□□ -2.02
CTDNEP1O95476 AC021749.1-201ENST00000604322 607 ntBASIC2.46□□□□□ -2.02
CTDNEP1O95476 AC080013.3-201ENST00000606839 578 ntBASIC2.46□□□□□ -2.02
CTDNEP1O95476 AC140725.3-201ENST00000616193 880 ntBASIC2.46□□□□□ -2.02
CTDNEP1O95476 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC2.46□□□□□ -2.02
CTDNEP1O95476 AC013470.4-201ENST00000619978 986 ntBASIC2.46□□□□□ -2.02
CTDNEP1O95476 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.46□□□□□ -2.02
CTDNEP1O95476 MIR1322-201ENST00000638013 71 ntBASIC2.46□□□□□ -2.02
CTDNEP1O95476 AP000553.5-201ENST00000641933 54 ntBASIC2.46□□□□□ -2.02
CTDNEP1O95476 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
CTDNEP1O95476 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
CTDNEP1O95476 CDR1-202ENST00000625883 1485 ntBASIC2.45□□□□□ -2.02
CTDNEP1O95476 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.45□□□□□ -2.02
CTDNEP1O95476 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
CTDNEP1O95476 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
CTDNEP1O95476 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
CTDNEP1O95476 RNU6-621P-201ENST00000364752 109 ntBASIC2.45□□□□□ -2.02
CTDNEP1O95476 DHFRP6-201ENST00000401776 268 ntBASIC2.45□□□□□ -2.02
CTDNEP1O95476 RNA5SP338-201ENST00000410495 85 ntBASIC2.45□□□□□ -2.02
CTDNEP1O95476 TMEM167AP1-201ENST00000423409 219 ntBASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 154.6 ms