Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 MIR3922-201ENST00000585192 84 ntBASIC3.2□□□□□ -1.9
SSX4O60224 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.2□□□□□ -1.9
SSX4O60224 DUXAP4-201ENST00000603046 613 ntBASIC3.2□□□□□ -1.9
SSX4O60224 AC064807.4-201ENST00000607201 407 ntBASIC3.2□□□□□ -1.9
SSX4O60224 AL451064.1-201ENST00000607718 471 ntBASIC3.2□□□□□ -1.9
SSX4O60224 AC006566.1-201ENST00000608943 513 ntBASIC3.2□□□□□ -1.9
SSX4O60224 AC103710.2-201ENST00000609912 942 ntBASIC3.2□□□□□ -1.9
SSX4O60224 AC138932.5-201ENST00000617759 563 ntBASIC3.2□□□□□ -1.9
SSX4O60224 AC091953.5-201ENST00000622919 233 ntBASIC3.2□□□□□ -1.9
SSX4O60224 PISRT1-201ENST00000626175 531 ntBASIC3.2□□□□□ -1.9
SSX4O60224 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.2□□□□□ -1.9
SSX4O60224 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.2□□□□□ -1.9
SSX4O60224 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SSX4O60224 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.2□□□□□ -1.9
SSX4O60224 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SSX4O60224 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SSX4O60224 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SSX4O60224 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.19□□□□□ -1.9
SSX4O60224 ZNF807-201ENST00000328088 1707 ntBASIC3.19□□□□□ -1.9
SSX4O60224 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SSX4O60224 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
SSX4O60224 AC118273.1-201ENST00000525324 3006 ntBASIC3.19□□□□□ -1.9
SSX4O60224 RNU6-1284P-201ENST00000363701 100 ntBASIC3.19□□□□□ -1.9
SSX4O60224 RNU4-24P-201ENST00000364565 139 ntBASIC3.19□□□□□ -1.9
SSX4O60224 Y_RNA.318-201ENST00000365131 97 ntBASIC3.19□□□□□ -1.9
SSX4O60224 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC3.19□□□□□ -1.9
SSX4O60224 Y_RNA.436-201ENST00000384097 102 ntBASIC3.19□□□□□ -1.9
SSX4O60224 MIR483-201ENST00000385070 76 ntBASIC3.19□□□□□ -1.9
SSX4O60224 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
SSX4O60224 RPL7P60-201ENST00000397636 735 ntBASIC3.19□□□□□ -1.9
SSX4O60224 DEFB108C-201ENST00000400154 252 ntBASIC3.19□□□□□ -1.9
SSX4O60224 RNU2-8P-201ENST00000410727 190 ntBASIC3.19□□□□□ -1.9
SSX4O60224 AC126124.2-201ENST00000413542 321 ntBASIC3.19□□□□□ -1.9
SSX4O60224 HMGB3P23-201ENST00000414981 585 ntBASIC3.19□□□□□ -1.9
SSX4O60224 BX842559.1-201ENST00000419615 532 ntBASIC3.19□□□□□ -1.9
SSX4O60224 NDUFB4P7-201ENST00000423198 363 ntBASIC3.19□□□□□ -1.9
SSX4O60224 ISCA1P6-201ENST00000427740 390 ntBASIC3.19□□□□□ -1.9
SSX4O60224 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.19□□□□□ -1.9
SSX4O60224 AL356867.1-201ENST00000429623 299 ntBASIC3.19□□□□□ -1.9
SSX4O60224 VN1R108P-201ENST00000431580 830 ntBASIC3.19□□□□□ -1.9
SSX4O60224 AC104850.1-201ENST00000435940 476 ntBASIC3.19□□□□□ -1.9
SSX4O60224 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.19□□□□□ -1.9
SSX4O60224 NDUFB4P6-201ENST00000436819 366 ntBASIC3.19□□□□□ -1.9
SSX4O60224 MTATP6P30-201ENST00000443540 664 ntBASIC3.19□□□□□ -1.9
SSX4O60224 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC3.19□□□□□ -1.9
SSX4O60224 AC125238.1-201ENST00000448842 249 ntBASIC3.19□□□□□ -1.9
SSX4O60224 RPS27AP1-201ENST00000475545 471 ntBASIC3.19□□□□□ -1.9
SSX4O60224 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.19□□□□□ -1.9
SSX4O60224 AC012181.1-201ENST00000479895 423 ntBASIC3.19□□□□□ -1.9
SSX4O60224 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC3.19□□□□□ -1.9
SSX4O60224 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.19□□□□□ -1.9
SSX4O60224 RNU6-1256P-201ENST00000516539 103 ntBASIC3.19□□□□□ -1.9
SSX4O60224 NRON-201ENST00000517270 370 ntBASIC3.19□□□□□ -1.9
SSX4O60224 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.19□□□□□ -1.9
SSX4O60224 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.19□□□□□ -1.9
SSX4O60224 AC004024.1-201ENST00000549244 247 ntBASIC3.19□□□□□ -1.9
SSX4O60224 AC093012.1-202ENST00000549403 582 ntBASIC3.19□□□□□ -1.9
SSX4O60224 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.19□□□□□ -1.9
SSX4O60224 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.19□□□□□ -1.9
SSX4O60224 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.19□□□□□ -1.9
SSX4O60224 AC098614.4-201ENST00000607601 462 ntBASIC3.19□□□□□ -1.9
SSX4O60224 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.19□□□□□ -1.9
SSX4O60224 AL732618.1-201ENST00000623251 301 ntBASIC3.19□□□□□ -1.9
SSX4O60224 AC110801.1-201ENST00000623590 212 ntBASIC3.19□□□□□ -1.9
SSX4O60224 AC092656.1-203ENST00000624134 423 ntBASIC3.19□□□□□ -1.9
SSX4O60224 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.19□□□□□ -1.9
SSX4O60224 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
SSX4O60224 FARSBP1-201ENST00000435808 1778 ntBASIC3.19□□□□□ -1.9
SSX4O60224 AC090740.1-201ENST00000623193 2262 ntBASIC3.19□□□□□ -1.9
SSX4O60224 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.19□□□□□ -1.9
SSX4O60224 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC3.19□□□□□ -1.9
SSX4O60224 AC007656.2-201ENST00000624902 4547 ntBASIC3.18□□□□□ -1.9
SSX4O60224 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
SSX4O60224 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.18□□□□□ -1.9
SSX4O60224 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SSX4O60224 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.18□□□□□ -1.9
SSX4O60224 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SSX4O60224 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SSX4O60224 RNU6-511P-201ENST00000363496 107 ntBASIC3.18□□□□□ -1.9
SSX4O60224 RNA5SP51-201ENST00000364750 119 ntBASIC3.18□□□□□ -1.9
SSX4O60224 RNU6-805P-201ENST00000365643 106 ntBASIC3.18□□□□□ -1.9
SSX4O60224 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
SSX4O60224 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SSX4O60224 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.18□□□□□ -1.9
SSX4O60224 MIR491-201ENST00000384877 84 ntBASIC3.18□□□□□ -1.9
SSX4O60224 MIR183-201ENST00000384958 110 ntBASIC3.18□□□□□ -1.9
SSX4O60224 MIR199A2-201ENST00000385289 110 ntBASIC3.18□□□□□ -1.9
SSX4O60224 RPS3AP36-201ENST00000398190 775 ntBASIC3.18□□□□□ -1.9
SSX4O60224 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.18□□□□□ -1.9
SSX4O60224 HMGB3P20-201ENST00000417997 600 ntBASIC3.18□□□□□ -1.9
SSX4O60224 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.18□□□□□ -1.9
SSX4O60224 AC006989.1-201ENST00000427212 131 ntBASIC3.18□□□□□ -1.9
SSX4O60224 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC3.18□□□□□ -1.9
SSX4O60224 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC3.18□□□□□ -1.9
SSX4O60224 USP9YP15-201ENST00000442391 422 ntBASIC3.18□□□□□ -1.9
SSX4O60224 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.18□□□□□ -1.9
SSX4O60224 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.18□□□□□ -1.9
SSX4O60224 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.18□□□□□ -1.9
SSX4O60224 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC3.18□□□□□ -1.9
SSX4O60224 AC068657.1-201ENST00000520807 306 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms