Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 MTCO2P5-201ENST00000422621 426 ntBASIC2.09□□□□□ -2.07
SGCEO43556 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
SGCEO43556 DPRXP1-201ENST00000426312 460 ntBASIC2.09□□□□□ -2.07
SGCEO43556 USP12PX-201ENST00000432383 1057 ntBASIC2.09□□□□□ -2.07
SGCEO43556 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC2.09□□□□□ -2.07
SGCEO43556 ARF4P4-201ENST00000439608 520 ntBASIC2.09□□□□□ -2.07
SGCEO43556 SDCBPP1-201ENST00000440192 890 ntBASIC2.09□□□□□ -2.07
SGCEO43556 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC2.09□□□□□ -2.07
SGCEO43556 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
SGCEO43556 RPS20P20-201ENST00000460498 340 ntBASIC2.09□□□□□ -2.07
SGCEO43556 AC090515.1-201ENST00000465295 476 ntBASIC2.09□□□□□ -2.07
SGCEO43556 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC2.09□□□□□ -2.07
SGCEO43556 AC090255.1-201ENST00000495779 349 ntBASIC2.09□□□□□ -2.07
SGCEO43556 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC2.09□□□□□ -2.07
SGCEO43556 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC2.09□□□□□ -2.07
SGCEO43556 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.09□□□□□ -2.07
SGCEO43556 RNA5SP24-201ENST00000516478 95 ntBASIC2.09□□□□□ -2.07
SGCEO43556 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC2.09□□□□□ -2.07
SGCEO43556 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC2.09□□□□□ -2.07
SGCEO43556 AC135628.1-201ENST00000568867 534 ntBASIC2.09□□□□□ -2.07
SGCEO43556 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC2.09□□□□□ -2.07
SGCEO43556 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC2.09□□□□□ -2.07
SGCEO43556 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC2.09□□□□□ -2.07
SGCEO43556 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.09□□□□□ -2.07
SGCEO43556 AC013476.2-201ENST00000614456 459 ntBASIC2.09□□□□□ -2.07
SGCEO43556 AL157770.1-201ENST00000623049 439 ntBASIC2.09□□□□□ -2.07
SGCEO43556 HPVC1-201ENST00000629899 1198 ntBASIC2.09□□□□□ -2.07
SGCEO43556 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.09□□□□□ -2.07
SGCEO43556 MKKS-204ENST00000639674 192 ntBASIC2.09□□□□□ -2.07
SGCEO43556 AC004944.1-201ENST00000517807 3059 ntBASIC2.09□□□□□ -2.07
SGCEO43556 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.09□□□□□ -2.08
SGCEO43556 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.09□□□□□ -2.08
SGCEO43556 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
SGCEO43556 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.08□□□□□ -2.08
SGCEO43556 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
SGCEO43556 MIR21-201ENST00000362134 72 ntBASIC2.08□□□□□ -2.08
SGCEO43556 RNU6-216P-201ENST00000363282 104 ntBASIC2.08□□□□□ -2.08
SGCEO43556 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.08□□□□□ -2.08
SGCEO43556 HMGN2P38-201ENST00000423806 265 ntBASIC2.08□□□□□ -2.08
SGCEO43556 SRIP2-201ENST00000428470 166 ntBASIC2.08□□□□□ -2.08
SGCEO43556 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.08□□□□□ -2.08
SGCEO43556 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.08□□□□□ -2.08
SGCEO43556 OSTCP8-201ENST00000445117 448 ntBASIC2.08□□□□□ -2.08
SGCEO43556 AL513328.1-201ENST00000446460 224 ntBASIC2.08□□□□□ -2.08
SGCEO43556 EEF1B2P7-201ENST00000451177 676 ntBASIC2.08□□□□□ -2.08
SGCEO43556 AC126389.1-201ENST00000477436 290 ntBASIC2.08□□□□□ -2.08
SGCEO43556 AL049873.1-201ENST00000480540 376 ntBASIC2.08□□□□□ -2.08
SGCEO43556 LINC00888-204ENST00000487386 421 ntBASIC2.08□□□□□ -2.08
SGCEO43556 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.08□□□□□ -2.08
SGCEO43556 GTF2IP9-201ENST00000502460 301 ntBASIC2.08□□□□□ -2.08
SGCEO43556 AC105252.1-201ENST00000503089 286 ntBASIC2.08□□□□□ -2.08
SGCEO43556 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC2.08□□□□□ -2.08
SGCEO43556 AC026436.1-201ENST00000510537 270 ntBASIC2.08□□□□□ -2.08
SGCEO43556 AC112673.1-201ENST00000513168 575 ntBASIC2.08□□□□□ -2.08
SGCEO43556 RNU6-362P-201ENST00000516736 90 ntBASIC2.08□□□□□ -2.08
SGCEO43556 NDUFS5P6-201ENST00000529136 295 ntBASIC2.08□□□□□ -2.08
SGCEO43556 AC021269.2-201ENST00000532318 330 ntBASIC2.08□□□□□ -2.08
SGCEO43556 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC2.08□□□□□ -2.08
SGCEO43556 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC2.08□□□□□ -2.08
SGCEO43556 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC2.08□□□□□ -2.08
SGCEO43556 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC2.08□□□□□ -2.08
SGCEO43556 AL390838.2-201ENST00000602394 274 ntBASIC2.08□□□□□ -2.08
SGCEO43556 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC2.08□□□□□ -2.08
SGCEO43556 AC026790.2-201ENST00000606282 430 ntBASIC2.08□□□□□ -2.08
SGCEO43556 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
SGCEO43556 AL158211.4-201ENST00000606988 584 ntBASIC2.08□□□□□ -2.08
SGCEO43556 AL590099.1-201ENST00000615276 138 ntBASIC2.08□□□□□ -2.08
SGCEO43556 MIR1322-201ENST00000638013 71 ntBASIC2.08□□□□□ -2.08
SGCEO43556 AL136360.1-201ENST00000503377 1900 ntBASIC2.08□□□□□ -2.08
SGCEO43556 ZNF720P1-201ENST00000562403 1939 ntBASIC2.08□□□□□ -2.08
SGCEO43556 AC131280.1-202ENST00000624067 4211 ntBASIC2.08□□□□□ -2.08
SGCEO43556 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.08□□□□□ -2.08
SGCEO43556 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
SGCEO43556 AL109809.4-201ENST00000603520 2185 ntBASIC2.08□□□□□ -2.08
SGCEO43556 Z99496.1-201ENST00000469424 1477 ntBASIC2.07□□□□□ -2.08
SGCEO43556 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
SGCEO43556 AC080128.1-201ENST00000474389 1917 ntBASIC2.07□□□□□ -2.08
SGCEO43556 AC016717.2-201ENST00000609089 5141 ntBASIC2.07□□□□□ -2.08
SGCEO43556 CKAP2P1-201ENST00000555477 2049 ntBASIC2.07□□□□□ -2.08
SGCEO43556 SNRPEP3-201ENST00000338402 276 ntBASIC2.07□□□□□ -2.08
SGCEO43556 RNU1-51P-201ENST00000365345 176 ntBASIC2.07□□□□□ -2.08
SGCEO43556 RNU6-354P-201ENST00000383862 107 ntBASIC2.07□□□□□ -2.08
SGCEO43556 RNU6-610P-201ENST00000384264 107 ntBASIC2.07□□□□□ -2.08
SGCEO43556 RNU6-750P-201ENST00000390946 107 ntBASIC2.07□□□□□ -2.08
SGCEO43556 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.07□□□□□ -2.08
SGCEO43556 RPL17P35-201ENST00000432217 549 ntBASIC2.07□□□□□ -2.08
SGCEO43556 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.07□□□□□ -2.08
SGCEO43556 RPS15AP5-201ENST00000436276 388 ntBASIC2.07□□□□□ -2.08
SGCEO43556 MOB1AP2-201ENST00000446060 614 ntBASIC2.07□□□□□ -2.08
SGCEO43556 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.07□□□□□ -2.08
SGCEO43556 ANKRD26P4-201ENST00000455755 950 ntBASIC2.07□□□□□ -2.08
SGCEO43556 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
SGCEO43556 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC2.07□□□□□ -2.08
SGCEO43556 AC234781.5-201ENST00000508429 271 ntBASIC2.07□□□□□ -2.08
SGCEO43556 XKRY-201ENST00000510392 1100 ntBASIC2.07□□□□□ -2.08
SGCEO43556 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC2.07□□□□□ -2.08
SGCEO43556 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.07□□□□□ -2.08
SGCEO43556 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.07□□□□□ -2.08
SGCEO43556 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.07□□□□□ -2.08
SGCEO43556 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms