Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 RNA5SP196-201ENST00000625967 102 ntBASIC3.97□□□□□ -1.77
PROM1O43490 ATM-228ENST00000639240 498 ntTSL 5 BASIC3.97□□□□□ -1.77
PROM1O43490 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.97□□□□□ -1.77
PROM1O43490 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
PROM1O43490 LARP1BP1-201ENST00000506036 1359 ntBASIC3.97□□□□□ -1.77
PROM1O43490 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
PROM1O43490 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
PROM1O43490 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC3.96□□□□□ -1.77
PROM1O43490 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
PROM1O43490 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
PROM1O43490 RNU6-989P-201ENST00000362756 107 ntBASIC3.96□□□□□ -1.78
PROM1O43490 RNU6-552P-201ENST00000362869 119 ntBASIC3.96□□□□□ -1.78
PROM1O43490 SNORA63-201ENST00000363450 132 ntBASIC3.96□□□□□ -1.78
PROM1O43490 RNU6-511P-201ENST00000363496 107 ntBASIC3.96□□□□□ -1.78
PROM1O43490 SNORA51.2-201ENST00000364595 132 ntBASIC3.96□□□□□ -1.78
PROM1O43490 HSPE1P26-201ENST00000405341 275 ntBASIC3.96□□□□□ -1.78
PROM1O43490 RNU4-26P-201ENST00000410270 107 ntBASIC3.96□□□□□ -1.78
PROM1O43490 RNU2-36P-201ENST00000410361 191 ntBASIC3.96□□□□□ -1.78
PROM1O43490 RN7SKP159-201ENST00000410657 292 ntBASIC3.96□□□□□ -1.78
PROM1O43490 RNU6-1148P-201ENST00000410992 104 ntBASIC3.96□□□□□ -1.78
PROM1O43490 RNA5SP107-201ENST00000411358 122 ntBASIC3.96□□□□□ -1.78
PROM1O43490 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC3.96□□□□□ -1.78
PROM1O43490 AL451062.2-201ENST00000427515 271 ntBASIC3.96□□□□□ -1.78
PROM1O43490 AC018644.1-201ENST00000429934 551 ntBASIC3.96□□□□□ -1.78
PROM1O43490 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.96□□□□□ -1.78
PROM1O43490 OR4C10P-201ENST00000434991 931 ntBASIC3.96□□□□□ -1.78
PROM1O43490 RPL23AP46-201ENST00000438548 490 ntBASIC3.96□□□□□ -1.78
PROM1O43490 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
PROM1O43490 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.96□□□□□ -1.78
PROM1O43490 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.96□□□□□ -1.78
PROM1O43490 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.96□□□□□ -1.78
PROM1O43490 AC234775.1-201ENST00000454247 670 ntBASIC3.96□□□□□ -1.78
PROM1O43490 AC233279.1-201ENST00000455300 423 ntBASIC3.96□□□□□ -1.78
PROM1O43490 HMGN2P7-201ENST00000456186 273 ntBASIC3.96□□□□□ -1.78
PROM1O43490 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.96□□□□□ -1.78
PROM1O43490 RPL9P32-201ENST00000464118 620 ntBASIC3.96□□□□□ -1.78
PROM1O43490 RPL21P99-201ENST00000480369 423 ntBASIC3.96□□□□□ -1.78
PROM1O43490 AC105137.1-201ENST00000484355 562 ntBASIC3.96□□□□□ -1.78
PROM1O43490 NDUFB4P9-201ENST00000511646 388 ntBASIC3.96□□□□□ -1.78
PROM1O43490 AC099522.1-202ENST00000514718 367 ntBASIC3.96□□□□□ -1.78
PROM1O43490 RNU4-49P-201ENST00000516080 140 ntBASIC3.96□□□□□ -1.78
PROM1O43490 SCARNA15.1-201ENST00000516384 125 ntBASIC3.96□□□□□ -1.78
PROM1O43490 RNA5SP503-201ENST00000517047 117 ntBASIC3.96□□□□□ -1.78
PROM1O43490 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC3.96□□□□□ -1.78
PROM1O43490 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.96□□□□□ -1.78
PROM1O43490 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC3.96□□□□□ -1.78
PROM1O43490 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.96□□□□□ -1.78
PROM1O43490 SCOCP1-201ENST00000554676 349 ntBASIC3.96□□□□□ -1.78
PROM1O43490 AC020914.4-201ENST00000597690 277 ntBASIC3.96□□□□□ -1.78
PROM1O43490 HMGB1P50-201ENST00000605814 607 ntBASIC3.96□□□□□ -1.78
PROM1O43490 AC012531.5-201ENST00000611375 151 ntBASIC3.96□□□□□ -1.78
PROM1O43490 AC126177.8-201ENST00000618339 1015 ntBASIC3.96□□□□□ -1.78
PROM1O43490 U6.114-201ENST00000636407 96 ntBASIC3.96□□□□□ -1.78
PROM1O43490 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
PROM1O43490 GABPAP-201ENST00000419271 1356 ntBASIC3.96□□□□□ -1.78
PROM1O43490 AC027287.1-201ENST00000553115 1453 ntBASIC3.96□□□□□ -1.78
PROM1O43490 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
PROM1O43490 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
PROM1O43490 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
PROM1O43490 MAPK10-372ENST00000641954 3413 ntBASIC3.96□□□□□ -1.78
PROM1O43490 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.96□□□□□ -1.78
PROM1O43490 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
PROM1O43490 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
PROM1O43490 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.95□□□□□ -1.78
PROM1O43490 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
PROM1O43490 RNU6-263P-201ENST00000363811 107 ntBASIC3.95□□□□□ -1.78
PROM1O43490 RN7SKP280-201ENST00000364196 304 ntBASIC3.95□□□□□ -1.78
PROM1O43490 Y_RNA.373-201ENST00000365600 103 ntBASIC3.95□□□□□ -1.78
PROM1O43490 RNU4-20P-201ENST00000365601 151 ntBASIC3.95□□□□□ -1.78
PROM1O43490 Y_RNA.419-201ENST00000384041 102 ntBASIC3.95□□□□□ -1.78
PROM1O43490 RNU6-1029P-201ENST00000384109 107 ntBASIC3.95□□□□□ -1.78
PROM1O43490 RNU6-821P-201ENST00000390995 107 ntBASIC3.95□□□□□ -1.78
PROM1O43490 MIR1302-11-201ENST00000408051 138 ntBASIC3.95□□□□□ -1.78
PROM1O43490 MIR1302-9-201ENST00000408365 138 ntBASIC3.95□□□□□ -1.78
PROM1O43490 MIR1302-10-201ENST00000408734 138 ntBASIC3.95□□□□□ -1.78
PROM1O43490 RNU6-193P-201ENST00000410977 107 ntBASIC3.95□□□□□ -1.78
PROM1O43490 COX6B1P7-201ENST00000430845 235 ntBASIC3.95□□□□□ -1.78
PROM1O43490 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.95□□□□□ -1.78
PROM1O43490 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.95□□□□□ -1.78
PROM1O43490 RPL35AP22-201ENST00000436855 335 ntBASIC3.95□□□□□ -1.78
PROM1O43490 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.95□□□□□ -1.78
PROM1O43490 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.95□□□□□ -1.78
PROM1O43490 AL590639.1-201ENST00000456484 337 ntBASIC3.95□□□□□ -1.78
PROM1O43490 PPP1R2P5-201ENST00000457256 603 ntBASIC3.95□□□□□ -1.78
PROM1O43490 RPL36AP13-201ENST00000457490 317 ntBASIC3.95□□□□□ -1.78
PROM1O43490 RPL7L1P8-201ENST00000469911 741 ntBASIC3.95□□□□□ -1.78
PROM1O43490 RN7SL585P-201ENST00000470538 280 ntBASIC3.95□□□□□ -1.78
PROM1O43490 UQCRHP4-201ENST00000471686 272 ntBASIC3.95□□□□□ -1.78
PROM1O43490 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.95□□□□□ -1.78
PROM1O43490 AC135721.1-201ENST00000497954 479 ntBASIC3.95□□□□□ -1.78
PROM1O43490 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC3.95□□□□□ -1.78
PROM1O43490 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.95□□□□□ -1.78
PROM1O43490 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.95□□□□□ -1.78
PROM1O43490 AC017037.1-201ENST00000508460 471 ntBASIC3.95□□□□□ -1.78
PROM1O43490 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.95□□□□□ -1.78
PROM1O43490 RN7SKP219-201ENST00000516825 296 ntBASIC3.95□□□□□ -1.78
PROM1O43490 HMGN1P28-201ENST00000521340 364 ntBASIC3.95□□□□□ -1.78
PROM1O43490 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
PROM1O43490 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.95□□□□□ -1.78
PROM1O43490 CR383656.7-201ENST00000548164 174 ntBASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms