Protein–RNA interactions for Protein: O15259

NPHP1, Nephrocystin-1, humanhuman

Predictions only

Length 732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1O15259 MIR7844-201ENST00000616161 122 ntBASIC3.96□□□□□ -1.78
NPHP1O15259 AC079416.3-201ENST00000624479 549 ntBASIC3.96□□□□□ -1.78
NPHP1O15259 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC3.96□□□□□ -1.78
NPHP1O15259 AC097655.1-201ENST00000635075 318 ntBASIC3.96□□□□□ -1.78
NPHP1O15259 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
NPHP1O15259 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
NPHP1O15259 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
NPHP1O15259 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
NPHP1O15259 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.95□□□□□ -1.78
NPHP1O15259 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.95□□□□□ -1.78
NPHP1O15259 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
NPHP1O15259 AL049641.1-201ENST00000441055 1948 ntBASIC3.95□□□□□ -1.78
NPHP1O15259 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.95□□□□□ -1.78
NPHP1O15259 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
NPHP1O15259 RNU6-501P-201ENST00000364072 100 ntBASIC3.95□□□□□ -1.78
NPHP1O15259 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
NPHP1O15259 Z85995.1-201ENST00000415547 335 ntBASIC3.95□□□□□ -1.78
NPHP1O15259 SPA17P1-201ENST00000416656 452 ntBASIC3.95□□□□□ -1.78
NPHP1O15259 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC3.95□□□□□ -1.78
NPHP1O15259 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.95□□□□□ -1.78
NPHP1O15259 AL365184.2-201ENST00000431139 435 ntBASIC3.95□□□□□ -1.78
NPHP1O15259 RPL7P34-201ENST00000433316 712 ntBASIC3.95□□□□□ -1.78
NPHP1O15259 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.95□□□□□ -1.78
NPHP1O15259 ELOCP30-201ENST00000447108 299 ntBASIC3.95□□□□□ -1.78
NPHP1O15259 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.95□□□□□ -1.78
NPHP1O15259 AL133217.1-201ENST00000450980 425 ntBASIC3.95□□□□□ -1.78
NPHP1O15259 ART2BP-201ENST00000453501 499 ntBASIC3.95□□□□□ -1.78
NPHP1O15259 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.95□□□□□ -1.78
NPHP1O15259 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
NPHP1O15259 RN7SL442P-201ENST00000473804 320 ntBASIC3.95□□□□□ -1.78
NPHP1O15259 RPL30P6-201ENST00000475925 342 ntBASIC3.95□□□□□ -1.78
NPHP1O15259 RPL23AP41-201ENST00000484754 458 ntBASIC3.95□□□□□ -1.78
NPHP1O15259 LARP1BP2-201ENST00000486594 519 ntBASIC3.95□□□□□ -1.78
NPHP1O15259 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
NPHP1O15259 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
NPHP1O15259 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
NPHP1O15259 MTND1P22-201ENST00000510572 951 ntBASIC3.95□□□□□ -1.78
NPHP1O15259 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC3.95□□□□□ -1.78
NPHP1O15259 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC3.95□□□□□ -1.78
NPHP1O15259 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3.95□□□□□ -1.78
NPHP1O15259 HMGB1P14-201ENST00000557424 591 ntBASIC3.95□□□□□ -1.78
NPHP1O15259 AMZ2P1-203ENST00000565833 850 ntBASIC3.95□□□□□ -1.78
NPHP1O15259 AC012435.1-202ENST00000568772 240 ntBASIC3.95□□□□□ -1.78
NPHP1O15259 OR10AB1P-201ENST00000609613 938 ntBASIC3.95□□□□□ -1.78
NPHP1O15259 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC3.95□□□□□ -1.78
NPHP1O15259 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC3.95□□□□□ -1.78
NPHP1O15259 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC3.95□□□□□ -1.78
NPHP1O15259 AC091304.6-201ENST00000619761 202 ntBASIC3.95□□□□□ -1.78
NPHP1O15259 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.95□□□□□ -1.78
NPHP1O15259 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
NPHP1O15259 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.95□□□□□ -1.78
NPHP1O15259 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.95□□□□□ -1.78
NPHP1O15259 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
NPHP1O15259 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
NPHP1O15259 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.94□□□□□ -1.78
NPHP1O15259 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.94□□□□□ -1.78
NPHP1O15259 RNU5A-8P-201ENST00000364102 114 ntBASIC3.94□□□□□ -1.78
NPHP1O15259 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.94□□□□□ -1.78
NPHP1O15259 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.94□□□□□ -1.78
NPHP1O15259 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC3.94□□□□□ -1.78
NPHP1O15259 RPL21P24-201ENST00000413752 448 ntBASIC3.94□□□□□ -1.78
NPHP1O15259 AC107081.1-201ENST00000414975 361 ntBASIC3.94□□□□□ -1.78
NPHP1O15259 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3.94□□□□□ -1.78
NPHP1O15259 RPL21P40-201ENST00000428586 483 ntBASIC3.94□□□□□ -1.78
NPHP1O15259 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.94□□□□□ -1.78
NPHP1O15259 AL512844.2-201ENST00000433990 593 ntBASIC3.94□□□□□ -1.78
NPHP1O15259 BX679664.1-201ENST00000434429 253 ntBASIC3.94□□□□□ -1.78
NPHP1O15259 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC3.94□□□□□ -1.78
NPHP1O15259 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC3.94□□□□□ -1.78
NPHP1O15259 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.94□□□□□ -1.78
NPHP1O15259 AL512286.1-201ENST00000439244 400 ntBASIC3.94□□□□□ -1.78
NPHP1O15259 AC005094.1-201ENST00000440420 368 ntBASIC3.94□□□□□ -1.78
NPHP1O15259 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.94□□□□□ -1.78
NPHP1O15259 FTH1P25-201ENST00000447665 469 ntBASIC3.94□□□□□ -1.78
NPHP1O15259 AC010099.1-201ENST00000455434 375 ntBASIC3.94□□□□□ -1.78
NPHP1O15259 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC3.94□□□□□ -1.78
NPHP1O15259 RNU6-420P-201ENST00000458780 107 ntBASIC3.94□□□□□ -1.78
NPHP1O15259 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
NPHP1O15259 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.94□□□□□ -1.78
NPHP1O15259 AC116347.2-201ENST00000514912 523 ntBASIC3.94□□□□□ -1.78
NPHP1O15259 RNU6-232P-201ENST00000517144 64 ntBASIC3.94□□□□□ -1.78
NPHP1O15259 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.94□□□□□ -1.78
NPHP1O15259 DUXAP5-201ENST00000529668 529 ntBASIC3.94□□□□□ -1.78
NPHP1O15259 AP000867.2-201ENST00000532468 320 ntBASIC3.94□□□□□ -1.78
NPHP1O15259 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
NPHP1O15259 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
NPHP1O15259 AC123904.3-201ENST00000547218 814 ntBASIC3.94□□□□□ -1.78
NPHP1O15259 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC3.94□□□□□ -1.78
NPHP1O15259 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC3.94□□□□□ -1.78
NPHP1O15259 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC3.94□□□□□ -1.78
NPHP1O15259 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.94□□□□□ -1.78
NPHP1O15259 AC116312.1-201ENST00000606841 314 ntBASIC3.94□□□□□ -1.78
NPHP1O15259 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.94□□□□□ -1.78
NPHP1O15259 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.94□□□□□ -1.78
NPHP1O15259 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
NPHP1O15259 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
NPHP1O15259 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
NPHP1O15259 AC233263.6-201ENST00000631132 1963 ntBASIC3.93□□□□□ -1.78
NPHP1O15259 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
NPHP1O15259 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms