Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 CR381572.1-201ENST00000625098 102 ntBASIC3.46□□□□□ -1.86
CUX2O14529 SNORA50A-202ENST00000629536 136 ntBASIC3.46□□□□□ -1.86
CUX2O14529 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
CUX2O14529 RNU6-1249P-201ENST00000363237 111 ntBASIC3.45□□□□□ -1.86
CUX2O14529 SNORA7.2-201ENST00000364446 145 ntBASIC3.45□□□□□ -1.86
CUX2O14529 MIR607-201ENST00000385241 96 ntBASIC3.45□□□□□ -1.86
CUX2O14529 MTND2P16-201ENST00000419987 799 ntBASIC3.45□□□□□ -1.86
CUX2O14529 AL035410.1-201ENST00000427409 427 ntBASIC3.45□□□□□ -1.86
CUX2O14529 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC3.45□□□□□ -1.86
CUX2O14529 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.45□□□□□ -1.86
CUX2O14529 AC092393.1-201ENST00000439625 742 ntBASIC3.45□□□□□ -1.86
CUX2O14529 AC004022.1-201ENST00000447766 1066 ntBASIC3.45□□□□□ -1.86
CUX2O14529 AC244505.3-201ENST00000454598 187 ntBASIC3.45□□□□□ -1.86
CUX2O14529 AC013828.1-201ENST00000481845 158 ntBASIC3.45□□□□□ -1.86
CUX2O14529 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC3.45□□□□□ -1.86
CUX2O14529 MTCO2P32-201ENST00000514865 403 ntBASIC3.45□□□□□ -1.86
CUX2O14529 RNU6ATAC12P-201ENST00000516542 115 ntBASIC3.45□□□□□ -1.86
CUX2O14529 MTCO3P15-201ENST00000526563 574 ntBASIC3.45□□□□□ -1.86
CUX2O14529 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.45□□□□□ -1.86
CUX2O14529 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.45□□□□□ -1.86
CUX2O14529 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.45□□□□□ -1.86
CUX2O14529 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC3.45□□□□□ -1.86
CUX2O14529 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CUX2O14529 AC092650.2-201ENST00000619984 902 ntBASIC3.45□□□□□ -1.86
CUX2O14529 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CUX2O14529 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CUX2O14529 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
CUX2O14529 HMGB1P5-201ENST00000255320 642 ntBASIC3.44□□□□□ -1.86
CUX2O14529 RNU6-335P-201ENST00000364563 113 ntBASIC3.44□□□□□ -1.86
CUX2O14529 RNU6-1300P-201ENST00000391046 108 ntBASIC3.44□□□□□ -1.86
CUX2O14529 RNU2-71P-201ENST00000411395 189 ntBASIC3.44□□□□□ -1.86
CUX2O14529 AC096533.1-201ENST00000411645 353 ntBASIC3.44□□□□□ -1.86
CUX2O14529 AL136133.1-201ENST00000413694 376 ntBASIC3.44□□□□□ -1.86
CUX2O14529 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC3.44□□□□□ -1.86
CUX2O14529 AL445685.2-201ENST00000422551 342 ntBASIC3.44□□□□□ -1.86
CUX2O14529 BX322784.1-201ENST00000455793 1077 ntBASIC3.44□□□□□ -1.86
CUX2O14529 RPS20P24-201ENST00000457473 361 ntBASIC3.44□□□□□ -1.86
CUX2O14529 AC008571.1-201ENST00000467232 300 ntBASIC3.44□□□□□ -1.86
CUX2O14529 AC026414.1-201ENST00000504046 698 ntBASIC3.44□□□□□ -1.86
CUX2O14529 MTCYBP37-201ENST00000510642 1133 ntBASIC3.44□□□□□ -1.86
CUX2O14529 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CUX2O14529 RNU6-1073P-201ENST00000517182 106 ntBASIC3.44□□□□□ -1.86
CUX2O14529 PTK2-220ENST00000520151 573 ntTSL 4 BASIC3.44□□□□□ -1.86
CUX2O14529 MTCYBP41-201ENST00000528913 1123 ntBASIC3.44□□□□□ -1.86
CUX2O14529 NDUFS5P6-201ENST00000529136 295 ntBASIC3.44□□□□□ -1.86
CUX2O14529 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.44□□□□□ -1.86
CUX2O14529 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.44□□□□□ -1.86
CUX2O14529 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC3.44□□□□□ -1.86
CUX2O14529 AC006023.2-201ENST00000609916 167 ntBASIC3.44□□□□□ -1.86
CUX2O14529 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC3.44□□□□□ -1.86
CUX2O14529 MTND2P41-201ENST00000637599 773 ntBASIC3.44□□□□□ -1.86
CUX2O14529 ZNF663P-202ENST00000641770 1131 ntBASIC3.44□□□□□ -1.86
CUX2O14529 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CUX2O14529 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CUX2O14529 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
CUX2O14529 AP001350.1-201ENST00000601906 1524 ntBASIC3.43□□□□□ -1.86
CUX2O14529 Y_RNA.36-201ENST00000362602 112 ntBASIC3.43□□□□□ -1.86
CUX2O14529 SNORA51.6-201ENST00000384151 125 ntBASIC3.43□□□□□ -1.86
CUX2O14529 MIR9-3-201ENST00000385084 90 ntBASIC3.43□□□□□ -1.86
CUX2O14529 SNORA26.7-201ENST00000391288 122 ntBASIC3.43□□□□□ -1.86
CUX2O14529 ERHP2-201ENST00000402323 299 ntBASIC3.43□□□□□ -1.86
CUX2O14529 MTCO3P1-205ENST00000422088 832 ntBASIC3.43□□□□□ -1.86
CUX2O14529 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC3.43□□□□□ -1.86
CUX2O14529 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.43□□□□□ -1.86
CUX2O14529 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.43□□□□□ -1.86
CUX2O14529 AC027673.1-201ENST00000456245 405 ntBASIC3.43□□□□□ -1.86
CUX2O14529 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC3.43□□□□□ -1.86
CUX2O14529 BOLA3P3-201ENST00000505182 232 ntBASIC3.43□□□□□ -1.86
CUX2O14529 MTND2P7-201ENST00000521337 640 ntBASIC3.43□□□□□ -1.86
CUX2O14529 AP004371.1-201ENST00000525240 214 ntBASIC3.43□□□□□ -1.86
CUX2O14529 LRRC6P1-201ENST00000532188 885 ntBASIC3.43□□□□□ -1.86
CUX2O14529 AC087897.1-201ENST00000550134 156 ntBASIC3.43□□□□□ -1.86
CUX2O14529 MTCYBP27-201ENST00000555160 670 ntBASIC3.43□□□□□ -1.86
CUX2O14529 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.43□□□□□ -1.86
CUX2O14529 MIR4666A-201ENST00000580160 79 ntBASIC3.43□□□□□ -1.86
CUX2O14529 AL669831.4-202ENST00000590817 238 ntBASIC3.43□□□□□ -1.86
CUX2O14529 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.43□□□□□ -1.86
CUX2O14529 MIR6515-201ENST00000619843 57 ntBASIC3.43□□□□□ -1.86
CUX2O14529 AC244517.12-201ENST00000623581 663 ntBASIC3.43□□□□□ -1.86
CUX2O14529 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.43□□□□□ -1.86
CUX2O14529 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CUX2O14529 RNU6-839P-201ENST00000363347 108 ntBASIC3.42□□□□□ -1.86
CUX2O14529 SEPT7P5-201ENST00000434048 306 ntBASIC3.42□□□□□ -1.86
CUX2O14529 MTCYBP42-201ENST00000444653 1130 ntBASIC3.42□□□□□ -1.86
CUX2O14529 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC3.42□□□□□ -1.86
CUX2O14529 snoU13.3-201ENST00000459441 104 ntBASIC3.42□□□□□ -1.86
CUX2O14529 VPS26AP1-201ENST00000483197 979 ntBASIC3.42□□□□□ -1.86
CUX2O14529 AC093767.1-201ENST00000504523 156 ntBASIC3.42□□□□□ -1.86
CUX2O14529 ATP5EP1-201ENST00000510257 156 ntBASIC3.42□□□□□ -1.86
CUX2O14529 AC112206.4-201ENST00000515142 405 ntBASIC3.42□□□□□ -1.86
CUX2O14529 RNA5SP402-201ENST00000517148 110 ntBASIC3.42□□□□□ -1.86
CUX2O14529 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC3.42□□□□□ -1.86
CUX2O14529 MIR3690-201ENST00000580266 75 ntBASIC3.42□□□□□ -1.86
CUX2O14529 AL512598.1-201ENST00000610158 273 ntBASIC3.42□□□□□ -1.86
CUX2O14529 AC084768.2-201ENST00000622736 221 ntBASIC3.42□□□□□ -1.86
CUX2O14529 FAM35CP-201ENST00000554755 2470 ntBASIC3.42□□□□□ -1.86
CUX2O14529 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
CUX2O14529 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CUX2O14529 AF127577.6-201ENST00000623352 2191 ntBASIC3.42□□□□□ -1.86
CUX2O14529 AC000367.1-201ENST00000452711 1766 ntBASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 200.3 ms