Protein–RNA interactions for Protein: O00479

HMGN4, High mobility group nucleosome-binding domain-containing protein 4, humanhuman

Predictions only

Length 90 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4O00479 AC103710.4-201ENST00000609301 899 ntBASIC1.23□□□□□ -2.21
HMGN4O00479 AC004852.3-201ENST00000614131 326 ntBASIC1.23□□□□□ -2.21
HMGN4O00479 AL449363.1-201ENST00000617815 186 ntBASIC1.23□□□□□ -2.21
HMGN4O00479 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC1.23□□□□□ -2.21
HMGN4O00479 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.22□□□□□ -2.21
HMGN4O00479 ZNF209P-201ENST00000593450 2304 ntBASIC1.22□□□□□ -2.21
HMGN4O00479 RNU6-457P-201ENST00000363999 107 ntBASIC1.22□□□□□ -2.21
HMGN4O00479 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
HMGN4O00479 RNU6-339P-201ENST00000384310 107 ntBASIC1.22□□□□□ -2.21
HMGN4O00479 MIR767-201ENST00000390228 109 ntBASIC1.22□□□□□ -2.21
HMGN4O00479 SLC9B1P2-201ENST00000398120 1184 ntBASIC1.22□□□□□ -2.21
HMGN4O00479 RPS3AP24-201ENST00000407896 734 ntBASIC1.22□□□□□ -2.21
HMGN4O00479 AL591806.2-201ENST00000433122 173 ntBASIC1.22□□□□□ -2.21
HMGN4O00479 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC1.22□□□□□ -2.21
HMGN4O00479 NDUFB4P6-201ENST00000436819 366 ntBASIC1.22□□□□□ -2.21
HMGN4O00479 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.22□□□□□ -2.21
HMGN4O00479 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.22□□□□□ -2.21
HMGN4O00479 RPS29P23-201ENST00000458635 123 ntBASIC1.22□□□□□ -2.21
HMGN4O00479 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC1.22□□□□□ -2.21
HMGN4O00479 RNU1-123P-201ENST00000458950 160 ntBASIC1.22□□□□□ -2.21
HMGN4O00479 AC107626.1-201ENST00000471084 183 ntBASIC1.22□□□□□ -2.21
HMGN4O00479 UBE2Q2P9-201ENST00000490086 202 ntBASIC1.22□□□□□ -2.21
HMGN4O00479 AC104685.1-201ENST00000502445 371 ntBASIC1.22□□□□□ -2.21
HMGN4O00479 AC091917.2-201ENST00000505002 744 ntBASIC1.22□□□□□ -2.21
HMGN4O00479 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC1.22□□□□□ -2.21
HMGN4O00479 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC1.22□□□□□ -2.21
HMGN4O00479 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC1.22□□□□□ -2.21
HMGN4O00479 ARL2BPP2-201ENST00000550907 489 ntBASIC1.22□□□□□ -2.21
HMGN4O00479 AL161670.1-201ENST00000554348 137 ntBASIC1.22□□□□□ -2.21
HMGN4O00479 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC1.22□□□□□ -2.21
HMGN4O00479 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC1.22□□□□□ -2.21
HMGN4O00479 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC1.22□□□□□ -2.21
HMGN4O00479 AL354943.1-201ENST00000572103 781 ntBASIC1.22□□□□□ -2.21
HMGN4O00479 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC1.22□□□□□ -2.21
HMGN4O00479 FAM60CP-201ENST00000591086 664 ntBASIC1.22□□□□□ -2.21
HMGN4O00479 AL109918.3-201ENST00000603072 338 ntBASIC1.22□□□□□ -2.21
HMGN4O00479 AC135507.1-201ENST00000607214 561 ntBASIC1.22□□□□□ -2.21
HMGN4O00479 AC006338.1-201ENST00000618453 749 ntBASIC1.22□□□□□ -2.21
HMGN4O00479 IL33-202ENST00000417746 2327 ntTSL 2 BASIC1.22□□□□□ -2.21
HMGN4O00479 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.21□□□□□ -2.22
HMGN4O00479 DDX10P1-201ENST00000448545 1933 ntBASIC1.21□□□□□ -2.22
HMGN4O00479 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
HMGN4O00479 OR1L1-202ENST00000373686 1083 ntBASIC1.21□□□□□ -2.22
HMGN4O00479 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC1.21□□□□□ -2.22
HMGN4O00479 RNU6-31P-201ENST00000384388 108 ntBASIC1.21□□□□□ -2.22
HMGN4O00479 MIR764-201ENST00000390811 85 ntBASIC1.21□□□□□ -2.22
HMGN4O00479 RNA5SP213-201ENST00000391031 106 ntBASIC1.21□□□□□ -2.22
HMGN4O00479 SNORA17.3-201ENST00000391159 129 ntBASIC1.21□□□□□ -2.22
HMGN4O00479 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC1.21□□□□□ -2.22
HMGN4O00479 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.21□□□□□ -2.22
HMGN4O00479 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.21□□□□□ -2.22
HMGN4O00479 AC098614.2-201ENST00000426040 255 ntBASIC1.21□□□□□ -2.22
HMGN4O00479 EZH2P1-201ENST00000431167 291 ntBASIC1.21□□□□□ -2.22
HMGN4O00479 HMGB1P27-201ENST00000431429 603 ntBASIC1.21□□□□□ -2.22
HMGN4O00479 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.21□□□□□ -2.22
HMGN4O00479 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC1.21□□□□□ -2.22
HMGN4O00479 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC1.21□□□□□ -2.22
HMGN4O00479 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
HMGN4O00479 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC1.21□□□□□ -2.22
HMGN4O00479 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC1.21□□□□□ -2.22
HMGN4O00479 AC096745.1-201ENST00000509945 370 ntBASIC1.21□□□□□ -2.22
HMGN4O00479 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
HMGN4O00479 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC1.21□□□□□ -2.22
HMGN4O00479 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.21□□□□□ -2.22
HMGN4O00479 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC1.21□□□□□ -2.22
HMGN4O00479 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC1.21□□□□□ -2.22
HMGN4O00479 POLR2KP1-201ENST00000553226 168 ntBASIC1.21□□□□□ -2.22
HMGN4O00479 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC1.21□□□□□ -2.22
HMGN4O00479 MED28P6-201ENST00000558776 231 ntBASIC1.21□□□□□ -2.22
HMGN4O00479 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.21□□□□□ -2.22
HMGN4O00479 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.21□□□□□ -2.22
HMGN4O00479 AC021755.4-201ENST00000616620 456 ntBASIC1.21□□□□□ -2.22
HMGN4O00479 AC109809.1-201ENST00000619665 545 ntBASIC1.21□□□□□ -2.22
HMGN4O00479 AP006248.3-201ENST00000623580 594 ntBASIC1.21□□□□□ -2.22
HMGN4O00479 VPS8-228ENST00000628962 207 ntTSL 5 BASIC1.21□□□□□ -2.22
HMGN4O00479 MIR7515-201ENST00000637837 67 ntBASIC1.21□□□□□ -2.22
HMGN4O00479 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC1.2□□□□□ -2.22
HMGN4O00479 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC1.2□□□□□ -2.22
HMGN4O00479 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
HMGN4O00479 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
HMGN4O00479 RNU6-989P-201ENST00000362756 107 ntBASIC1.2□□□□□ -2.22
HMGN4O00479 RNU6-1074P-201ENST00000383995 104 ntBASIC1.2□□□□□ -2.22
HMGN4O00479 U8.10-201ENST00000384260 133 ntBASIC1.2□□□□□ -2.22
HMGN4O00479 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
HMGN4O00479 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC1.2□□□□□ -2.22
HMGN4O00479 SNORD56-201ENST00000413522 71 ntBASIC1.2□□□□□ -2.22
HMGN4O00479 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC1.2□□□□□ -2.22
HMGN4O00479 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC1.2□□□□□ -2.22
HMGN4O00479 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.2□□□□□ -2.22
HMGN4O00479 MTCYBP3-201ENST00000445588 1137 ntBASIC1.2□□□□□ -2.22
HMGN4O00479 KLF3P2-201ENST00000465138 268 ntBASIC1.2□□□□□ -2.22
HMGN4O00479 AC104629.2-201ENST00000468627 598 ntBASIC1.2□□□□□ -2.22
HMGN4O00479 AC004223.1-201ENST00000479840 271 ntBASIC1.2□□□□□ -2.22
HMGN4O00479 AC023141.11-201ENST00000508864 202 ntBASIC1.2□□□□□ -2.22
HMGN4O00479 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
HMGN4O00479 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC1.2□□□□□ -2.22
HMGN4O00479 PTK2-220ENST00000520151 573 ntTSL 4 BASIC1.2□□□□□ -2.22
HMGN4O00479 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC1.2□□□□□ -2.22
HMGN4O00479 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.2□□□□□ -2.22
HMGN4O00479 FAM60BP-201ENST00000578364 658 ntBASIC1.2□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms