Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 MT-TC-201ENST00000387405 66 ntBASIC2.51□□□□□ -2.01
TMX2-CTNND1H3BSU7 RNA5SP181-201ENST00000410246 98 ntBASIC2.51□□□□□ -2.01
TMX2-CTNND1H3BSU7 RNU4-78P-201ENST00000410940 126 ntBASIC2.51□□□□□ -2.01
TMX2-CTNND1H3BSU7 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.51□□□□□ -2.01
TMX2-CTNND1H3BSU7 RAP1BP1-201ENST00000412709 553 ntBASIC2.51□□□□□ -2.01
TMX2-CTNND1H3BSU7 TPMTP2-201ENST00000414372 726 ntBASIC2.51□□□□□ -2.01
TMX2-CTNND1H3BSU7 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC2.51□□□□□ -2.01
TMX2-CTNND1H3BSU7 AL953862.1-201ENST00000423016 168 ntBASIC2.51□□□□□ -2.01
TMX2-CTNND1H3BSU7 AC092447.3-201ENST00000426027 686 ntBASIC2.51□□□□□ -2.01
TMX2-CTNND1H3BSU7 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.51□□□□□ -2.01
TMX2-CTNND1H3BSU7 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC2.51□□□□□ -2.01
TMX2-CTNND1H3BSU7 Z96811.1-201ENST00000445880 108 ntBASIC2.51□□□□□ -2.01
TMX2-CTNND1H3BSU7 MTND1P16-201ENST00000465177 898 ntBASIC2.51□□□□□ -2.01
TMX2-CTNND1H3BSU7 SYPL1P1-201ENST00000473622 768 ntBASIC2.51□□□□□ -2.01
TMX2-CTNND1H3BSU7 SNORA31.1-201ENST00000515993 133 ntBASIC2.51□□□□□ -2.01
TMX2-CTNND1H3BSU7 RNU6-27P-201ENST00000516146 107 ntBASIC2.51□□□□□ -2.01
TMX2-CTNND1H3BSU7 SNORA31.5-201ENST00000516190 133 ntBASIC2.51□□□□□ -2.01
TMX2-CTNND1H3BSU7 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC2.51□□□□□ -2.01
TMX2-CTNND1H3BSU7 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
TMX2-CTNND1H3BSU7 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
TMX2-CTNND1H3BSU7 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC2.51□□□□□ -2.01
TMX2-CTNND1H3BSU7 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC2.51□□□□□ -2.01
TMX2-CTNND1H3BSU7 AL512347.1-201ENST00000566420 503 ntBASIC2.51□□□□□ -2.01
TMX2-CTNND1H3BSU7 MTCO3P24-201ENST00000572729 782 ntBASIC2.51□□□□□ -2.01
TMX2-CTNND1H3BSU7 MIR4999-201ENST00000585029 91 ntBASIC2.51□□□□□ -2.01
TMX2-CTNND1H3BSU7 AL353778.1-201ENST00000603149 408 ntBASIC2.51□□□□□ -2.01
TMX2-CTNND1H3BSU7 AC009220.3-201ENST00000604318 586 ntBASIC2.51□□□□□ -2.01
TMX2-CTNND1H3BSU7 AC006270.3-201ENST00000605967 1036 ntBASIC2.51□□□□□ -2.01
TMX2-CTNND1H3BSU7 AL136981.2-201ENST00000617319 734 ntBASIC2.51□□□□□ -2.01
TMX2-CTNND1H3BSU7 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
TMX2-CTNND1H3BSU7 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.5□□□□□ -2.01
TMX2-CTNND1H3BSU7 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
TMX2-CTNND1H3BSU7 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.5□□□□□ -2.01
TMX2-CTNND1H3BSU7 FRG1BP-201ENST00000278882 761 ntBASIC2.5□□□□□ -2.01
TMX2-CTNND1H3BSU7 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
TMX2-CTNND1H3BSU7 RNA5SP258-201ENST00000362750 119 ntBASIC2.5□□□□□ -2.01
TMX2-CTNND1H3BSU7 RNU6-433P-201ENST00000363216 104 ntBASIC2.5□□□□□ -2.01
TMX2-CTNND1H3BSU7 SNORD56.5-201ENST00000364281 72 ntBASIC2.5□□□□□ -2.01
TMX2-CTNND1H3BSU7 DEFB109C-201ENST00000382575 264 ntBASIC2.5□□□□□ -2.01
TMX2-CTNND1H3BSU7 DEFB109B-201ENST00000382656 264 ntBASIC2.5□□□□□ -2.01
TMX2-CTNND1H3BSU7 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
TMX2-CTNND1H3BSU7 AL356057.3-201ENST00000402607 340 ntBASIC2.5□□□□□ -2.01
TMX2-CTNND1H3BSU7 AL591034.1-201ENST00000407447 340 ntBASIC2.5□□□□□ -2.01
TMX2-CTNND1H3BSU7 AC092447.6-201ENST00000414578 210 ntBASIC2.5□□□□□ -2.01
TMX2-CTNND1H3BSU7 RPL7P30-201ENST00000420888 709 ntBASIC2.5□□□□□ -2.01
TMX2-CTNND1H3BSU7 AL590233.1-201ENST00000430017 456 ntBASIC2.5□□□□□ -2.01
TMX2-CTNND1H3BSU7 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC2.5□□□□□ -2.01
TMX2-CTNND1H3BSU7 MTCYBP34-201ENST00000439552 670 ntBASIC2.5□□□□□ -2.01
TMX2-CTNND1H3BSU7 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC2.5□□□□□ -2.01
TMX2-CTNND1H3BSU7 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.5□□□□□ -2.01
TMX2-CTNND1H3BSU7 CACYBPP2-201ENST00000453625 678 ntBASIC2.5□□□□□ -2.01
TMX2-CTNND1H3BSU7 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC2.5□□□□□ -2.01
TMX2-CTNND1H3BSU7 AC097493.1-201ENST00000463958 372 ntBASIC2.5□□□□□ -2.01
TMX2-CTNND1H3BSU7 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC2.5□□□□□ -2.01
TMX2-CTNND1H3BSU7 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC2.5□□□□□ -2.01
TMX2-CTNND1H3BSU7 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC2.5□□□□□ -2.01
TMX2-CTNND1H3BSU7 LTV1P1-201ENST00000510683 1237 ntBASIC2.5□□□□□ -2.01
TMX2-CTNND1H3BSU7 RNU6-1129P-201ENST00000515964 104 ntBASIC2.5□□□□□ -2.01
TMX2-CTNND1H3BSU7 AP003122.3-201ENST00000526316 255 ntBASIC2.5□□□□□ -2.01
TMX2-CTNND1H3BSU7 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC2.5□□□□□ -2.01
TMX2-CTNND1H3BSU7 ZNF321P-202ENST00000550843 495 ntBASIC2.5□□□□□ -2.01
TMX2-CTNND1H3BSU7 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.5□□□□□ -2.01
TMX2-CTNND1H3BSU7 RPL23AP78-201ENST00000599928 470 ntBASIC2.5□□□□□ -2.01
TMX2-CTNND1H3BSU7 AC012669.1-201ENST00000603209 283 ntBASIC2.5□□□□□ -2.01
TMX2-CTNND1H3BSU7 AC007621.1-201ENST00000604544 437 ntBASIC2.5□□□□□ -2.01
TMX2-CTNND1H3BSU7 AC245297.2-201ENST00000610119 565 ntBASIC2.5□□□□□ -2.01
TMX2-CTNND1H3BSU7 BX664608.1-201ENST00000610519 487 ntBASIC2.5□□□□□ -2.01
TMX2-CTNND1H3BSU7 AC006329.2-201ENST00000611491 394 ntBASIC2.5□□□□□ -2.01
TMX2-CTNND1H3BSU7 AC004009.2-201ENST00000623016 728 ntBASIC2.5□□□□□ -2.01
TMX2-CTNND1H3BSU7 AP000770.2-201ENST00000623694 100 ntBASIC2.5□□□□□ -2.01
TMX2-CTNND1H3BSU7 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.5□□□□□ -2.01
TMX2-CTNND1H3BSU7 ZNF271P-202ENST00000465539 1970 ntBASIC2.5□□□□□ -2.01
TMX2-CTNND1H3BSU7 CUL1P1-201ENST00000509510 2425 ntBASIC2.5□□□□□ -2.01
TMX2-CTNND1H3BSU7 AL079343.1-201ENST00000572358 1771 ntBASIC2.49□□□□□ -2.01
TMX2-CTNND1H3BSU7 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
TMX2-CTNND1H3BSU7 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
TMX2-CTNND1H3BSU7 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
TMX2-CTNND1H3BSU7 MIR6073-201ENST00000352083 89 ntBASIC2.49□□□□□ -2.01
TMX2-CTNND1H3BSU7 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
TMX2-CTNND1H3BSU7 SNORD21-201ENST00000383953 95 ntBASIC2.49□□□□□ -2.01
TMX2-CTNND1H3BSU7 RNU6-1122P-201ENST00000384449 107 ntBASIC2.49□□□□□ -2.01
TMX2-CTNND1H3BSU7 RNU2-25P-201ENST00000411041 191 ntBASIC2.49□□□□□ -2.01
TMX2-CTNND1H3BSU7 AC005005.2-201ENST00000420779 380 ntBASIC2.49□□□□□ -2.01
TMX2-CTNND1H3BSU7 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC2.49□□□□□ -2.01
TMX2-CTNND1H3BSU7 AC010099.3-201ENST00000423896 409 ntBASIC2.49□□□□□ -2.01
TMX2-CTNND1H3BSU7 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC2.49□□□□□ -2.01
TMX2-CTNND1H3BSU7 OFD1P12Y-201ENST00000427963 1207 ntBASIC2.49□□□□□ -2.01
TMX2-CTNND1H3BSU7 OFD1P13Y-201ENST00000431179 1232 ntBASIC2.49□□□□□ -2.01
TMX2-CTNND1H3BSU7 RPL7P34-201ENST00000433316 712 ntBASIC2.49□□□□□ -2.01
TMX2-CTNND1H3BSU7 MTCYBP45-201ENST00000435243 565 ntBASIC2.49□□□□□ -2.01
TMX2-CTNND1H3BSU7 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC2.49□□□□□ -2.01
TMX2-CTNND1H3BSU7 MTCYBP3-201ENST00000445588 1137 ntBASIC2.49□□□□□ -2.01
TMX2-CTNND1H3BSU7 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC2.49□□□□□ -2.01
TMX2-CTNND1H3BSU7 AL353691.1-201ENST00000451332 387 ntBASIC2.49□□□□□ -2.01
TMX2-CTNND1H3BSU7 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.49□□□□□ -2.01
TMX2-CTNND1H3BSU7 RPL23AP31-201ENST00000456160 467 ntBASIC2.49□□□□□ -2.01
TMX2-CTNND1H3BSU7 ENSA-210ENST00000503241 574 ntTSL 3 BASIC2.49□□□□□ -2.01
TMX2-CTNND1H3BSU7 AC114981.1-201ENST00000503897 678 ntBASIC2.49□□□□□ -2.01
TMX2-CTNND1H3BSU7 AC093677.1-201ENST00000514414 678 ntBASIC2.49□□□□□ -2.01
TMX2-CTNND1H3BSU7 SNORA31.15-201ENST00000516771 132 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms