Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 RNA5SP108-201ENST00000605921 117 ntBASIC4.35□□□□□ -1.71
SHISA3A0PJX4 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.35□□□□□ -1.71
SHISA3A0PJX4 RN7SL787P-201ENST00000613000 284 ntBASIC4.35□□□□□ -1.71
SHISA3A0PJX4 WDR75-207ENST00000631047 270 ntTSL 5 BASIC4.35□□□□□ -1.71
SHISA3A0PJX4 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.35□□□□□ -1.71
SHISA3A0PJX4 SAMMSON-213ENST00000641336 1521 ntBASIC4.35□□□□□ -1.71
SHISA3A0PJX4 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC4.35□□□□□ -1.71
SHISA3A0PJX4 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC4.35□□□□□ -1.71
SHISA3A0PJX4 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.34□□□□□ -1.71
SHISA3A0PJX4 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
SHISA3A0PJX4 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC4.34□□□□□ -1.71
SHISA3A0PJX4 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
SHISA3A0PJX4 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.34□□□□□ -1.71
SHISA3A0PJX4 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
SHISA3A0PJX4 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
SHISA3A0PJX4 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
SHISA3A0PJX4 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.34□□□□□ -1.71
SHISA3A0PJX4 Y_RNA.33-201ENST00000362591 102 ntBASIC4.34□□□□□ -1.71
SHISA3A0PJX4 SNORA73.1-201ENST00000363107 205 ntBASIC4.34□□□□□ -1.71
SHISA3A0PJX4 RNU6-173P-201ENST00000364215 104 ntBASIC4.34□□□□□ -1.71
SHISA3A0PJX4 Y_RNA.518-201ENST00000384552 113 ntBASIC4.34□□□□□ -1.71
SHISA3A0PJX4 Y_RNA.562-201ENST00000384695 113 ntBASIC4.34□□□□□ -1.71
SHISA3A0PJX4 ELOCP20-201ENST00000422460 345 ntBASIC4.34□□□□□ -1.71
SHISA3A0PJX4 EIF4EP2-201ENST00000422816 654 ntBASIC4.34□□□□□ -1.71
SHISA3A0PJX4 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.34□□□□□ -1.71
SHISA3A0PJX4 MTCO1P39-201ENST00000426148 480 ntBASIC4.34□□□□□ -1.71
SHISA3A0PJX4 AC006946.1-201ENST00000429106 328 ntBASIC4.34□□□□□ -1.71
SHISA3A0PJX4 RPS27P18-201ENST00000431701 247 ntBASIC4.34□□□□□ -1.71
SHISA3A0PJX4 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.34□□□□□ -1.71
SHISA3A0PJX4 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.34□□□□□ -1.71
SHISA3A0PJX4 RNA5SP471-201ENST00000516971 106 ntBASIC4.34□□□□□ -1.71
SHISA3A0PJX4 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.34□□□□□ -1.71
SHISA3A0PJX4 HSPE1P20-201ENST00000538133 289 ntBASIC4.34□□□□□ -1.71
SHISA3A0PJX4 TRAV37-201ENST00000553906 342 ntBASIC4.34□□□□□ -1.71
SHISA3A0PJX4 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC4.34□□□□□ -1.71
SHISA3A0PJX4 MIR1273E-201ENST00000581165 102 ntBASIC4.34□□□□□ -1.71
SHISA3A0PJX4 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.34□□□□□ -1.71
SHISA3A0PJX4 AC006272.2-201ENST00000594725 163 ntBASIC4.34□□□□□ -1.71
SHISA3A0PJX4 AC098826.3-201ENST00000603823 466 ntBASIC4.34□□□□□ -1.71
SHISA3A0PJX4 RAC1P9-201ENST00000604990 392 ntBASIC4.34□□□□□ -1.71
SHISA3A0PJX4 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.34□□□□□ -1.71
SHISA3A0PJX4 AC091979.2-201ENST00000607514 214 ntBASIC4.34□□□□□ -1.71
SHISA3A0PJX4 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC4.34□□□□□ -1.71
SHISA3A0PJX4 AL691477.1-201ENST00000624398 162 ntBASIC4.34□□□□□ -1.71
SHISA3A0PJX4 AL049767.1-202ENST00000637826 242 ntBASIC4.34□□□□□ -1.71
SHISA3A0PJX4 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
SHISA3A0PJX4 ZNF299P-201ENST00000406845 1804 ntBASIC4.34□□□□□ -1.71
SHISA3A0PJX4 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC4.34□□□□□ -1.72
SHISA3A0PJX4 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
SHISA3A0PJX4 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
SHISA3A0PJX4 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.34□□□□□ -1.72
SHISA3A0PJX4 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
SHISA3A0PJX4 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.34□□□□□ -1.72
SHISA3A0PJX4 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.34□□□□□ -1.72
SHISA3A0PJX4 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.34□□□□□ -1.72
SHISA3A0PJX4 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC4.33□□□□□ -1.72
SHISA3A0PJX4 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SHISA3A0PJX4 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SHISA3A0PJX4 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
SHISA3A0PJX4 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
SHISA3A0PJX4 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SHISA3A0PJX4 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SHISA3A0PJX4 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC4.33□□□□□ -1.72
SHISA3A0PJX4 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC4.33□□□□□ -1.72
SHISA3A0PJX4 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
SHISA3A0PJX4 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
SHISA3A0PJX4 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.33□□□□□ -1.72
SHISA3A0PJX4 Y_RNA.14-201ENST00000362415 103 ntBASIC4.33□□□□□ -1.72
SHISA3A0PJX4 RNU6-1167P-201ENST00000363227 94 ntBASIC4.33□□□□□ -1.72
SHISA3A0PJX4 RNA5SP242-201ENST00000364171 118 ntBASIC4.33□□□□□ -1.72
SHISA3A0PJX4 Y_RNA.222-201ENST00000364264 102 ntBASIC4.33□□□□□ -1.72
SHISA3A0PJX4 RNU6-209P-201ENST00000384118 107 ntBASIC4.33□□□□□ -1.72
SHISA3A0PJX4 SNORA51.11-201ENST00000384442 131 ntBASIC4.33□□□□□ -1.72
SHISA3A0PJX4 Y_RNA.515-201ENST00000384535 112 ntBASIC4.33□□□□□ -1.72
SHISA3A0PJX4 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
SHISA3A0PJX4 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC4.33□□□□□ -1.72
SHISA3A0PJX4 AC007098.1-201ENST00000420122 367 ntBASIC4.33□□□□□ -1.72
SHISA3A0PJX4 AC139712.2-201ENST00000424302 339 ntBASIC4.33□□□□□ -1.72
SHISA3A0PJX4 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC4.33□□□□□ -1.72
SHISA3A0PJX4 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.33□□□□□ -1.72
SHISA3A0PJX4 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.33□□□□□ -1.72
SHISA3A0PJX4 AC023141.9-201ENST00000458734 412 ntBASIC4.33□□□□□ -1.72
SHISA3A0PJX4 RPL39P38-201ENST00000467018 153 ntBASIC4.33□□□□□ -1.72
SHISA3A0PJX4 FO393415.2-201ENST00000480085 343 ntBASIC4.33□□□□□ -1.72
SHISA3A0PJX4 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC4.33□□□□□ -1.72
SHISA3A0PJX4 Y_RNA.680-201ENST00000516441 93 ntBASIC4.33□□□□□ -1.72
SHISA3A0PJX4 SCARNA21.2-201ENST00000516600 166 ntBASIC4.33□□□□□ -1.72
SHISA3A0PJX4 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC4.33□□□□□ -1.72
SHISA3A0PJX4 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.33□□□□□ -1.72
SHISA3A0PJX4 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC4.33□□□□□ -1.72
SHISA3A0PJX4 MIR5701-3-201ENST00000578890 82 ntBASIC4.33□□□□□ -1.72
SHISA3A0PJX4 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC4.33□□□□□ -1.72
SHISA3A0PJX4 MIR5701-1-201ENST00000585138 82 ntBASIC4.33□□□□□ -1.72
SHISA3A0PJX4 AC002545.1-201ENST00000592511 181 ntBASIC4.33□□□□□ -1.72
SHISA3A0PJX4 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC4.33□□□□□ -1.72
SHISA3A0PJX4 AL390123.1-201ENST00000603216 237 ntBASIC4.33□□□□□ -1.72
SHISA3A0PJX4 AC123912.5-201ENST00000605470 343 ntBASIC4.33□□□□□ -1.72
SHISA3A0PJX4 MIR3976-201ENST00000606807 139 ntBASIC4.33□□□□□ -1.72
SHISA3A0PJX4 RNA5SP440-201ENST00000612665 119 ntBASIC4.33□□□□□ -1.72
SHISA3A0PJX4 MIR5701-2-201ENST00000615634 82 ntBASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms