Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC163A0A0D9SF12 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC4.47□□□□□ -1.69
CCDC163A0A0D9SF12 IL7-206ENST00000520269 456 ntTSL 3 BASIC4.47□□□□□ -1.69
CCDC163A0A0D9SF12 TRAV8-5-201ENST00000537369 341 ntBASIC4.47□□□□□ -1.69
CCDC163A0A0D9SF12 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC4.47□□□□□ -1.69
CCDC163A0A0D9SF12 MIR4286-201ENST00000580651 93 ntBASIC4.47□□□□□ -1.69
CCDC163A0A0D9SF12 AP003400.5-201ENST00000624827 617 ntBASIC4.47□□□□□ -1.69
CCDC163A0A0D9SF12 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.47□□□□□ -1.69
CCDC163A0A0D9SF12 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC163A0A0D9SF12 AL161912.2-201ENST00000565707 3007 ntBASIC4.47□□□□□ -1.69
CCDC163A0A0D9SF12 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC163A0A0D9SF12 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.46□□□□□ -1.69
CCDC163A0A0D9SF12 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.69
CCDC163A0A0D9SF12 AC126323.6-202ENST00000568092 3511 ntBASIC4.46□□□□□ -1.69
CCDC163A0A0D9SF12 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
CCDC163A0A0D9SF12 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
CCDC163A0A0D9SF12 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CCDC163A0A0D9SF12 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.46□□□□□ -1.7
CCDC163A0A0D9SF12 AC066616.2-201ENST00000559334 1481 ntBASIC4.46□□□□□ -1.7
CCDC163A0A0D9SF12 Y_RNA.530-201ENST00000384587 101 ntBASIC4.46□□□□□ -1.7
CCDC163A0A0D9SF12 RNA5SP171-201ENST00000391071 115 ntBASIC4.46□□□□□ -1.7
CCDC163A0A0D9SF12 BX682237.1-201ENST00000415016 335 ntBASIC4.46□□□□□ -1.7
CCDC163A0A0D9SF12 HSPE1P1-201ENST00000421494 318 ntBASIC4.46□□□□□ -1.7
CCDC163A0A0D9SF12 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC4.46□□□□□ -1.7
CCDC163A0A0D9SF12 AL592045.1-201ENST00000429867 352 ntBASIC4.46□□□□□ -1.7
CCDC163A0A0D9SF12 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.46□□□□□ -1.7
CCDC163A0A0D9SF12 AC004938.1-201ENST00000438468 308 ntBASIC4.46□□□□□ -1.7
CCDC163A0A0D9SF12 CEACAMP4-201ENST00000457676 421 ntBASIC4.46□□□□□ -1.7
CCDC163A0A0D9SF12 snoU13.22-201ENST00000459428 104 ntBASIC4.46□□□□□ -1.7
CCDC163A0A0D9SF12 SNRPGP3-201ENST00000469405 227 ntBASIC4.46□□□□□ -1.7
CCDC163A0A0D9SF12 RPL21P93-201ENST00000480465 489 ntBASIC4.46□□□□□ -1.7
CCDC163A0A0D9SF12 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC4.46□□□□□ -1.7
CCDC163A0A0D9SF12 RNU6-914P-201ENST00000516749 109 ntBASIC4.46□□□□□ -1.7
CCDC163A0A0D9SF12 RNA5SP471-201ENST00000516971 106 ntBASIC4.46□□□□□ -1.7
CCDC163A0A0D9SF12 AC105029.1-201ENST00000520250 669 ntBASIC4.46□□□□□ -1.7
CCDC163A0A0D9SF12 IGKV2D-19-201ENST00000523346 262 ntBASIC4.46□□□□□ -1.7
CCDC163A0A0D9SF12 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CCDC163A0A0D9SF12 AC005868.1-201ENST00000536421 331 ntBASIC4.46□□□□□ -1.7
CCDC163A0A0D9SF12 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC4.46□□□□□ -1.7
CCDC163A0A0D9SF12 BPIFA4P-203ENST00000603168 689 ntBASIC4.46□□□□□ -1.7
CCDC163A0A0D9SF12 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC4.46□□□□□ -1.7
CCDC163A0A0D9SF12 AC128687.2-201ENST00000609657 566 ntBASIC4.46□□□□□ -1.7
CCDC163A0A0D9SF12 AC104237.2-201ENST00000612456 443 ntBASIC4.46□□□□□ -1.7
CCDC163A0A0D9SF12 MIR6075-201ENST00000620782 95 ntBASIC4.46□□□□□ -1.7
CCDC163A0A0D9SF12 AL512643.1-201ENST00000635735 524 ntBASIC4.46□□□□□ -1.7
CCDC163A0A0D9SF12 Z99571.1-201ENST00000636677 394 ntBASIC4.46□□□□□ -1.7
CCDC163A0A0D9SF12 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC4.46□□□□□ -1.7
CCDC163A0A0D9SF12 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.46□□□□□ -1.7
CCDC163A0A0D9SF12 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
CCDC163A0A0D9SF12 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CCDC163A0A0D9SF12 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.46□□□□□ -1.7
CCDC163A0A0D9SF12 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CCDC163A0A0D9SF12 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
CCDC163A0A0D9SF12 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CCDC163A0A0D9SF12 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.45□□□□□ -1.7
CCDC163A0A0D9SF12 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.45□□□□□ -1.7
CCDC163A0A0D9SF12 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
CCDC163A0A0D9SF12 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC163A0A0D9SF12 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
CCDC163A0A0D9SF12 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
CCDC163A0A0D9SF12 MIR331-201ENST00000362302 94 ntBASIC4.45□□□□□ -1.7
CCDC163A0A0D9SF12 UBBP2-201ENST00000376781 231 ntBASIC4.45□□□□□ -1.7
CCDC163A0A0D9SF12 RNU6-434P-201ENST00000384376 107 ntBASIC4.45□□□□□ -1.7
CCDC163A0A0D9SF12 MIR554-201ENST00000384874 96 ntBASIC4.45□□□□□ -1.7
CCDC163A0A0D9SF12 AL590704.1-201ENST00000402856 794 ntBASIC4.45□□□□□ -1.7
CCDC163A0A0D9SF12 AL139397.2-201ENST00000404529 772 ntBASIC4.45□□□□□ -1.7
CCDC163A0A0D9SF12 RNA5SP44-201ENST00000410446 133 ntBASIC4.45□□□□□ -1.7
CCDC163A0A0D9SF12 AL356095.1-201ENST00000417217 199 ntBASIC4.45□□□□□ -1.7
CCDC163A0A0D9SF12 ACTR3BP6-201ENST00000422332 1241 ntBASIC4.45□□□□□ -1.7
CCDC163A0A0D9SF12 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC4.45□□□□□ -1.7
CCDC163A0A0D9SF12 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC4.45□□□□□ -1.7
CCDC163A0A0D9SF12 AC012671.1-201ENST00000451912 203 ntBASIC4.45□□□□□ -1.7
CCDC163A0A0D9SF12 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC4.45□□□□□ -1.7
CCDC163A0A0D9SF12 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.45□□□□□ -1.7
CCDC163A0A0D9SF12 HIGD1AP13-201ENST00000509878 289 ntBASIC4.45□□□□□ -1.7
CCDC163A0A0D9SF12 AC008958.1-201ENST00000511047 682 ntBASIC4.45□□□□□ -1.7
CCDC163A0A0D9SF12 RNU6-189P-201ENST00000516120 101 ntBASIC4.45□□□□□ -1.7
CCDC163A0A0D9SF12 SNORA70.16-201ENST00000516390 95 ntBASIC4.45□□□□□ -1.7
CCDC163A0A0D9SF12 SCARNA15.2-201ENST00000516409 127 ntBASIC4.45□□□□□ -1.7
CCDC163A0A0D9SF12 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC4.45□□□□□ -1.7
CCDC163A0A0D9SF12 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.45□□□□□ -1.7
CCDC163A0A0D9SF12 AC025946.2-201ENST00000603398 234 ntBASIC4.45□□□□□ -1.7
CCDC163A0A0D9SF12 AL592436.1-201ENST00000605135 558 ntBASIC4.45□□□□□ -1.7
CCDC163A0A0D9SF12 AL132765.2-201ENST00000610812 351 ntBASIC4.45□□□□□ -1.7
CCDC163A0A0D9SF12 AC009233.1-201ENST00000616477 371 ntBASIC4.45□□□□□ -1.7
CCDC163A0A0D9SF12 DLEU1_1.1-201ENST00000618107 190 ntBASIC4.45□□□□□ -1.7
CCDC163A0A0D9SF12 AL133216.2-202ENST00000634512 349 ntBASIC4.45□□□□□ -1.7
CCDC163A0A0D9SF12 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC163A0A0D9SF12 AL672296.1-201ENST00000427780 2158 ntBASIC4.45□□□□□ -1.7
CCDC163A0A0D9SF12 AC104623.2-202ENST00000623477 4002 ntBASIC4.45□□□□□ -1.7
CCDC163A0A0D9SF12 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.45□□□□□ -1.7
CCDC163A0A0D9SF12 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC163A0A0D9SF12 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC163A0A0D9SF12 ZNF285B-201ENST00000561698 1767 ntBASIC4.45□□□□□ -1.7
CCDC163A0A0D9SF12 AL359922.3-201ENST00000624779 1670 ntBASIC4.45□□□□□ -1.7
CCDC163A0A0D9SF12 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
CCDC163A0A0D9SF12 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
CCDC163A0A0D9SF12 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CCDC163A0A0D9SF12 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CCDC163A0A0D9SF12 Y_RNA.58-201ENST00000362807 102 ntBASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms