Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC3.12□□□□□ -1.91
IGHV4-28A0A0C4DH34 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
IGHV4-28A0A0C4DH34 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.11□□□□□ -1.91
IGHV4-28A0A0C4DH34 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
IGHV4-28A0A0C4DH34 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.11□□□□□ -1.91
IGHV4-28A0A0C4DH34 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.11□□□□□ -1.91
IGHV4-28A0A0C4DH34 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
IGHV4-28A0A0C4DH34 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.11□□□□□ -1.91
IGHV4-28A0A0C4DH34 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
IGHV4-28A0A0C4DH34 AC000123.3-201ENST00000624029 4975 ntBASIC3.11□□□□□ -1.91
IGHV4-28A0A0C4DH34 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
IGHV4-28A0A0C4DH34 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
IGHV4-28A0A0C4DH34 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC3.11□□□□□ -1.91
IGHV4-28A0A0C4DH34 SYF2-202ENST00000354361 926 ntTSL 2 BASIC3.11□□□□□ -1.91
IGHV4-28A0A0C4DH34 RNU6-715P-201ENST00000365204 103 ntBASIC3.11□□□□□ -1.91
IGHV4-28A0A0C4DH34 RNU6-831P-201ENST00000384548 107 ntBASIC3.11□□□□□ -1.91
IGHV4-28A0A0C4DH34 SNORD70.1-201ENST00000391007 85 ntBASIC3.11□□□□□ -1.91
IGHV4-28A0A0C4DH34 RN7SKP32-201ENST00000410167 303 ntBASIC3.11□□□□□ -1.91
IGHV4-28A0A0C4DH34 RNA5SP239-201ENST00000410218 129 ntBASIC3.11□□□□□ -1.91
IGHV4-28A0A0C4DH34 MTND3P8-201ENST00000412909 339 ntBASIC3.11□□□□□ -1.91
IGHV4-28A0A0C4DH34 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC3.11□□□□□ -1.91
IGHV4-28A0A0C4DH34 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.11□□□□□ -1.91
IGHV4-28A0A0C4DH34 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC3.11□□□□□ -1.91
IGHV4-28A0A0C4DH34 AL160275.3-201ENST00000423876 471 ntBASIC3.11□□□□□ -1.91
IGHV4-28A0A0C4DH34 RSL24D1P6-201ENST00000426934 401 ntBASIC3.11□□□□□ -1.91
IGHV4-28A0A0C4DH34 AL365400.1-201ENST00000431854 640 ntBASIC3.11□□□□□ -1.91
IGHV4-28A0A0C4DH34 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC3.11□□□□□ -1.91
IGHV4-28A0A0C4DH34 MRPL50P4-201ENST00000446432 475 ntBASIC3.11□□□□□ -1.91
IGHV4-28A0A0C4DH34 AC073587.1-201ENST00000447093 876 ntBASIC3.11□□□□□ -1.91
IGHV4-28A0A0C4DH34 RPL7P19-201ENST00000469948 618 ntBASIC3.11□□□□□ -1.91
IGHV4-28A0A0C4DH34 RPL7P5-201ENST00000471472 736 ntBASIC3.11□□□□□ -1.91
IGHV4-28A0A0C4DH34 RPL21P93-201ENST00000480465 489 ntBASIC3.11□□□□□ -1.91
IGHV4-28A0A0C4DH34 AC068587.1-201ENST00000483613 781 ntBASIC3.11□□□□□ -1.91
IGHV4-28A0A0C4DH34 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC3.11□□□□□ -1.91
IGHV4-28A0A0C4DH34 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.11□□□□□ -1.91
IGHV4-28A0A0C4DH34 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.11□□□□□ -1.91
IGHV4-28A0A0C4DH34 AC103851.1-201ENST00000506833 274 ntBASIC3.11□□□□□ -1.91
IGHV4-28A0A0C4DH34 FAM206BP-201ENST00000510179 541 ntBASIC3.11□□□□□ -1.91
IGHV4-28A0A0C4DH34 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
IGHV4-28A0A0C4DH34 RNU6-914P-201ENST00000516749 109 ntBASIC3.11□□□□□ -1.91
IGHV4-28A0A0C4DH34 AC134698.5-201ENST00000519444 336 ntBASIC3.11□□□□□ -1.91
IGHV4-28A0A0C4DH34 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.11□□□□□ -1.91
IGHV4-28A0A0C4DH34 AP004242.1-201ENST00000533701 349 ntBASIC3.11□□□□□ -1.91
IGHV4-28A0A0C4DH34 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.11□□□□□ -1.91
IGHV4-28A0A0C4DH34 AC004024.1-201ENST00000549244 247 ntBASIC3.11□□□□□ -1.91
IGHV4-28A0A0C4DH34 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC3.11□□□□□ -1.91
IGHV4-28A0A0C4DH34 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.11□□□□□ -1.91
IGHV4-28A0A0C4DH34 AC037471.2-201ENST00000564941 598 ntBASIC3.11□□□□□ -1.91
IGHV4-28A0A0C4DH34 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC3.11□□□□□ -1.91
IGHV4-28A0A0C4DH34 AC136624.4-201ENST00000573044 370 ntBASIC3.11□□□□□ -1.91
IGHV4-28A0A0C4DH34 RPS3AP23-202ENST00000574601 686 ntBASIC3.11□□□□□ -1.91
IGHV4-28A0A0C4DH34 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.11□□□□□ -1.91
IGHV4-28A0A0C4DH34 RN7SL176P-201ENST00000580352 264 ntBASIC3.11□□□□□ -1.91
IGHV4-28A0A0C4DH34 MIR4742-201ENST00000581069 85 ntBASIC3.11□□□□□ -1.91
IGHV4-28A0A0C4DH34 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
IGHV4-28A0A0C4DH34 BNIP3P25-201ENST00000596023 559 ntBASIC3.11□□□□□ -1.91
IGHV4-28A0A0C4DH34 VN1R80P-201ENST00000597126 338 ntBASIC3.11□□□□□ -1.91
IGHV4-28A0A0C4DH34 AL354984.3-201ENST00000604803 325 ntBASIC3.11□□□□□ -1.91
IGHV4-28A0A0C4DH34 AC021646.1-201ENST00000605469 484 ntBASIC3.11□□□□□ -1.91
IGHV4-28A0A0C4DH34 AL359697.1-201ENST00000624879 587 ntBASIC3.11□□□□□ -1.91
IGHV4-28A0A0C4DH34 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
IGHV4-28A0A0C4DH34 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
IGHV4-28A0A0C4DH34 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC3.11□□□□□ -1.91
IGHV4-28A0A0C4DH34 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
IGHV4-28A0A0C4DH34 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
IGHV4-28A0A0C4DH34 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.11□□□□□ -1.91
IGHV4-28A0A0C4DH34 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
IGHV4-28A0A0C4DH34 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
IGHV4-28A0A0C4DH34 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.1□□□□□ -1.91
IGHV4-28A0A0C4DH34 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC3.1□□□□□ -1.91
IGHV4-28A0A0C4DH34 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC3.1□□□□□ -1.91
IGHV4-28A0A0C4DH34 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
IGHV4-28A0A0C4DH34 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
IGHV4-28A0A0C4DH34 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
IGHV4-28A0A0C4DH34 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
IGHV4-28A0A0C4DH34 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
IGHV4-28A0A0C4DH34 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
IGHV4-28A0A0C4DH34 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC3.1□□□□□ -1.91
IGHV4-28A0A0C4DH34 ATP8A2P2-201ENST00000437678 1568 ntBASIC3.1□□□□□ -1.91
IGHV4-28A0A0C4DH34 RN7SKP44-201ENST00000363602 316 ntBASIC3.1□□□□□ -1.91
IGHV4-28A0A0C4DH34 Y_RNA.167-201ENST00000363735 109 ntBASIC3.1□□□□□ -1.91
IGHV4-28A0A0C4DH34 RNU6-512P-201ENST00000364438 103 ntBASIC3.1□□□□□ -1.91
IGHV4-28A0A0C4DH34 SNORA16.2-201ENST00000390991 127 ntBASIC3.1□□□□□ -1.91
IGHV4-28A0A0C4DH34 AL590704.1-201ENST00000402856 794 ntBASIC3.1□□□□□ -1.91
IGHV4-28A0A0C4DH34 AL121834.1-202ENST00000404494 277 ntBASIC3.1□□□□□ -1.91
IGHV4-28A0A0C4DH34 MIR1290-201ENST00000408735 78 ntBASIC3.1□□□□□ -1.91
IGHV4-28A0A0C4DH34 RNA5SP36-201ENST00000410197 133 ntBASIC3.1□□□□□ -1.91
IGHV4-28A0A0C4DH34 MIR1911-201ENST00000410783 80 ntBASIC3.1□□□□□ -1.91
IGHV4-28A0A0C4DH34 POLHP1-201ENST00000411806 470 ntBASIC3.1□□□□□ -1.91
IGHV4-28A0A0C4DH34 AL356867.1-201ENST00000429623 299 ntBASIC3.1□□□□□ -1.91
IGHV4-28A0A0C4DH34 AL592045.1-201ENST00000429867 352 ntBASIC3.1□□□□□ -1.91
IGHV4-28A0A0C4DH34 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.1□□□□□ -1.91
IGHV4-28A0A0C4DH34 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC3.1□□□□□ -1.91
IGHV4-28A0A0C4DH34 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC3.1□□□□□ -1.91
IGHV4-28A0A0C4DH34 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.1□□□□□ -1.91
IGHV4-28A0A0C4DH34 AMD1P1-201ENST00000457220 922 ntBASIC3.1□□□□□ -1.91
IGHV4-28A0A0C4DH34 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.1□□□□□ -1.91
IGHV4-28A0A0C4DH34 RPL37P6-201ENST00000460682 294 ntBASIC3.1□□□□□ -1.91
IGHV4-28A0A0C4DH34 AC087588.1-201ENST00000462203 316 ntBASIC3.1□□□□□ -1.91
IGHV4-28A0A0C4DH34 RPS26P28-201ENST00000470806 348 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms