Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC0.8□□□□□ -2.28
LINC01558Q9Y6Z2 VTA1P1-201ENST00000414044 866 ntBASIC0.8□□□□□ -2.28
LINC01558Q9Y6Z2 AC096649.2-201ENST00000416186 393 ntBASIC0.8□□□□□ -2.28
LINC01558Q9Y6Z2 LINC01347-201ENST00000417964 355 ntBASIC0.8□□□□□ -2.28
LINC01558Q9Y6Z2 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC0.8□□□□□ -2.28
LINC01558Q9Y6Z2 BOLA3P4-201ENST00000418151 400 ntBASIC0.8□□□□□ -2.28
LINC01558Q9Y6Z2 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC0.8□□□□□ -2.28
LINC01558Q9Y6Z2 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC0.8□□□□□ -2.28
LINC01558Q9Y6Z2 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC0.8□□□□□ -2.28
LINC01558Q9Y6Z2 AC092393.1-201ENST00000439625 742 ntBASIC0.8□□□□□ -2.28
LINC01558Q9Y6Z2 AC009238.1-201ENST00000442165 424 ntBASIC0.8□□□□□ -2.28
LINC01558Q9Y6Z2 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC0.8□□□□□ -2.28
LINC01558Q9Y6Z2 AC009237.6-201ENST00000446969 424 ntBASIC0.8□□□□□ -2.28
LINC01558Q9Y6Z2 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC0.8□□□□□ -2.28
LINC01558Q9Y6Z2 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC0.8□□□□□ -2.28
LINC01558Q9Y6Z2 SNORD109B-201ENST00000458961 67 ntBASIC0.8□□□□□ -2.28
LINC01558Q9Y6Z2 SNORD109A-201ENST00000459128 67 ntBASIC0.8□□□□□ -2.28
LINC01558Q9Y6Z2 AC015724.1-201ENST00000478577 156 ntBASIC0.8□□□□□ -2.28
LINC01558Q9Y6Z2 AC006390.1-201ENST00000508068 283 ntBASIC0.8□□□□□ -2.28
LINC01558Q9Y6Z2 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC0.8□□□□□ -2.28
LINC01558Q9Y6Z2 RNA5SP281-201ENST00000516504 135 ntBASIC0.8□□□□□ -2.28
LINC01558Q9Y6Z2 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC0.8□□□□□ -2.28
LINC01558Q9Y6Z2 AP002748.2-201ENST00000528671 348 ntBASIC0.8□□□□□ -2.28
LINC01558Q9Y6Z2 CARD18-203ENST00000532895 422 ntTSL 2 BASIC0.8□□□□□ -2.28
LINC01558Q9Y6Z2 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC0.8□□□□□ -2.28
LINC01558Q9Y6Z2 AC074051.3-201ENST00000570238 358 ntBASIC0.8□□□□□ -2.28
LINC01558Q9Y6Z2 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC0.8□□□□□ -2.28
LINC01558Q9Y6Z2 AC068790.3-201ENST00000602988 553 ntBASIC0.8□□□□□ -2.28
LINC01558Q9Y6Z2 AL138963.2-201ENST00000605137 226 ntBASIC0.8□□□□□ -2.28
LINC01558Q9Y6Z2 AC018638.7-201ENST00000605836 1114 ntBASIC0.8□□□□□ -2.28
LINC01558Q9Y6Z2 AL138478.1-201ENST00000612252 832 ntBASIC0.8□□□□□ -2.28
LINC01558Q9Y6Z2 AP005212.4-201ENST00000614206 710 ntBASIC0.8□□□□□ -2.28
LINC01558Q9Y6Z2 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC0.8□□□□□ -2.28
LINC01558Q9Y6Z2 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC0.8□□□□□ -2.28
LINC01558Q9Y6Z2 AP003476.1-201ENST00000623984 516 ntBASIC0.8□□□□□ -2.28
LINC01558Q9Y6Z2 NUP58P1-201ENST00000502546 1738 ntBASIC0.8□□□□□ -2.28
LINC01558Q9Y6Z2 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC0.79□□□□□ -2.28
LINC01558Q9Y6Z2 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
LINC01558Q9Y6Z2 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC0.79□□□□□ -2.28
LINC01558Q9Y6Z2 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC0.79□□□□□ -2.28
LINC01558Q9Y6Z2 SNORD26-201ENST00000384147 75 ntBASIC0.79□□□□□ -2.28
LINC01558Q9Y6Z2 RNU6-921P-201ENST00000384361 107 ntBASIC0.79□□□□□ -2.28
LINC01558Q9Y6Z2 SNORA67.3-201ENST00000384366 140 ntBASIC0.79□□□□□ -2.28
LINC01558Q9Y6Z2 MIR649-201ENST00000384843 97 ntBASIC0.79□□□□□ -2.28
LINC01558Q9Y6Z2 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
LINC01558Q9Y6Z2 RN7SKP101-201ENST00000411376 320 ntBASIC0.79□□□□□ -2.28
LINC01558Q9Y6Z2 NDUFB4P7-201ENST00000423198 363 ntBASIC0.79□□□□□ -2.28
LINC01558Q9Y6Z2 BX276092.3-201ENST00000424182 230 ntBASIC0.79□□□□□ -2.28
LINC01558Q9Y6Z2 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC0.79□□□□□ -2.28
LINC01558Q9Y6Z2 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
LINC01558Q9Y6Z2 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC0.79□□□□□ -2.28
LINC01558Q9Y6Z2 AL591503.2-201ENST00000442314 1005 ntBASIC0.79□□□□□ -2.28
LINC01558Q9Y6Z2 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC0.79□□□□□ -2.28
LINC01558Q9Y6Z2 AC108938.1-201ENST00000451204 136 ntBASIC0.79□□□□□ -2.28
LINC01558Q9Y6Z2 SUMO2P2-201ENST00000456482 255 ntBASIC0.79□□□□□ -2.28
LINC01558Q9Y6Z2 HMGN2P23-201ENST00000456759 269 ntBASIC0.79□□□□□ -2.28
LINC01558Q9Y6Z2 AC008379.1-201ENST00000463655 464 ntBASIC0.79□□□□□ -2.28
LINC01558Q9Y6Z2 PABPC1P3-201ENST00000469174 459 ntBASIC0.79□□□□□ -2.28
LINC01558Q9Y6Z2 AC091959.2-201ENST00000477363 321 ntBASIC0.79□□□□□ -2.28
LINC01558Q9Y6Z2 AL049873.1-201ENST00000480540 376 ntBASIC0.79□□□□□ -2.28
LINC01558Q9Y6Z2 SUMO1P1-201ENST00000497904 306 ntBASIC0.79□□□□□ -2.28
LINC01558Q9Y6Z2 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC0.79□□□□□ -2.28
LINC01558Q9Y6Z2 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC0.79□□□□□ -2.28
LINC01558Q9Y6Z2 RNA5SP61-201ENST00000516453 100 ntBASIC0.79□□□□□ -2.28
LINC01558Q9Y6Z2 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC0.79□□□□□ -2.28
LINC01558Q9Y6Z2 RRN3P3-201ENST00000549207 578 ntBASIC0.79□□□□□ -2.28
LINC01558Q9Y6Z2 IMMP1LP2-201ENST00000552954 492 ntBASIC0.79□□□□□ -2.28
LINC01558Q9Y6Z2 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC0.79□□□□□ -2.28
LINC01558Q9Y6Z2 AC022069.1-201ENST00000582910 658 ntBASIC0.79□□□□□ -2.28
LINC01558Q9Y6Z2 AP000403.1-201ENST00000603349 851 ntBASIC0.79□□□□□ -2.28
LINC01558Q9Y6Z2 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC0.79□□□□□ -2.28
LINC01558Q9Y6Z2 MIR7848-201ENST00000617402 101 ntBASIC0.79□□□□□ -2.28
LINC01558Q9Y6Z2 ZYXP1-201ENST00000617638 118 ntBASIC0.79□□□□□ -2.28
LINC01558Q9Y6Z2 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC0.79□□□□□ -2.28
LINC01558Q9Y6Z2 AC018445.2-201ENST00000622987 260 ntBASIC0.79□□□□□ -2.28
LINC01558Q9Y6Z2 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC0.79□□□□□ -2.28
LINC01558Q9Y6Z2 AC007785.2-201ENST00000598627 1916 ntBASIC0.79□□□□□ -2.28
LINC01558Q9Y6Z2 AC005832.2-201ENST00000538921 1430 ntBASIC0.79□□□□□ -2.28
LINC01558Q9Y6Z2 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC0.79□□□□□ -2.28
LINC01558Q9Y6Z2 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC0.78□□□□□ -2.28
LINC01558Q9Y6Z2 MTND5P30-201ENST00000452896 1731 ntBASIC0.78□□□□□ -2.28
LINC01558Q9Y6Z2 MIR424-201ENST00000362227 98 ntBASIC0.78□□□□□ -2.28
LINC01558Q9Y6Z2 RNU6-939P-201ENST00000384634 107 ntBASIC0.78□□□□□ -2.28
LINC01558Q9Y6Z2 RNU6ATAC38P-201ENST00000408119 126 ntBASIC0.78□□□□□ -2.28
LINC01558Q9Y6Z2 RNU2-41P-201ENST00000410991 178 ntBASIC0.78□□□□□ -2.28
LINC01558Q9Y6Z2 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC0.78□□□□□ -2.28
LINC01558Q9Y6Z2 RPL24P2-201ENST00000421023 475 ntBASIC0.78□□□□□ -2.28
LINC01558Q9Y6Z2 AC007742.1-201ENST00000425789 329 ntBASIC0.78□□□□□ -2.28
LINC01558Q9Y6Z2 AL445669.1-201ENST00000426743 755 ntBASIC0.78□□□□□ -2.28
LINC01558Q9Y6Z2 AL645568.3-201ENST00000433683 316 ntBASIC0.78□□□□□ -2.28
LINC01558Q9Y6Z2 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC0.78□□□□□ -2.28
LINC01558Q9Y6Z2 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC0.78□□□□□ -2.28
LINC01558Q9Y6Z2 ELOCP26-201ENST00000436067 329 ntBASIC0.78□□□□□ -2.28
LINC01558Q9Y6Z2 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC0.78□□□□□ -2.28
LINC01558Q9Y6Z2 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC0.78□□□□□ -2.28
LINC01558Q9Y6Z2 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC0.78□□□□□ -2.28
LINC01558Q9Y6Z2 AC092757.1-201ENST00000467293 467 ntBASIC0.78□□□□□ -2.28
LINC01558Q9Y6Z2 RPS20P22-201ENST00000473700 357 ntBASIC0.78□□□□□ -2.28
LINC01558Q9Y6Z2 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC0.78□□□□□ -2.28
LINC01558Q9Y6Z2 AC093801.2-201ENST00000503966 1050 ntBASIC0.78□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 179 ms