Protein–RNA interactions for Protein: Q9Y6N9

USH1C, Harmonin, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1CQ9Y6N9 AL513331.1-201ENST00000411908 397 ntBASIC2.2□□□□□ -2.06
USH1CQ9Y6N9 HMGB1P11-201ENST00000413899 637 ntBASIC2.2□□□□□ -2.06
USH1CQ9Y6N9 Z85995.1-201ENST00000415547 335 ntBASIC2.2□□□□□ -2.06
USH1CQ9Y6N9 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.2□□□□□ -2.06
USH1CQ9Y6N9 NDUFB4P7-201ENST00000423198 363 ntBASIC2.2□□□□□ -2.06
USH1CQ9Y6N9 AC007742.1-201ENST00000425789 329 ntBASIC2.2□□□□□ -2.06
USH1CQ9Y6N9 BLOC1S2P1-201ENST00000428431 301 ntBASIC2.2□□□□□ -2.06
USH1CQ9Y6N9 AL590233.1-201ENST00000430017 456 ntBASIC2.2□□□□□ -2.06
USH1CQ9Y6N9 ELOCP26-201ENST00000436067 329 ntBASIC2.2□□□□□ -2.06
USH1CQ9Y6N9 AC018634.1-201ENST00000437554 401 ntBASIC2.2□□□□□ -2.06
USH1CQ9Y6N9 SDR42E1P3-201ENST00000438345 502 ntBASIC2.2□□□□□ -2.06
USH1CQ9Y6N9 AC025033.1-201ENST00000463883 194 ntBASIC2.2□□□□□ -2.06
USH1CQ9Y6N9 AC078857.1-201ENST00000469870 667 ntBASIC2.2□□□□□ -2.06
USH1CQ9Y6N9 HSPE1P6-201ENST00000479457 291 ntBASIC2.2□□□□□ -2.06
USH1CQ9Y6N9 EIF4EP3-201ENST00000498782 656 ntBASIC2.2□□□□□ -2.06
USH1CQ9Y6N9 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC2.2□□□□□ -2.06
USH1CQ9Y6N9 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC2.2□□□□□ -2.06
USH1CQ9Y6N9 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.2□□□□□ -2.06
USH1CQ9Y6N9 AC017037.2-201ENST00000513850 890 ntBASIC2.2□□□□□ -2.06
USH1CQ9Y6N9 RNU6-1256P-201ENST00000516539 103 ntBASIC2.2□□□□□ -2.06
USH1CQ9Y6N9 UBTFL10-201ENST00000528532 562 ntBASIC2.2□□□□□ -2.06
USH1CQ9Y6N9 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.2□□□□□ -2.06
USH1CQ9Y6N9 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC2.2□□□□□ -2.06
USH1CQ9Y6N9 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC2.2□□□□□ -2.06
USH1CQ9Y6N9 AC009127.3-201ENST00000570531 403 ntBASIC2.2□□□□□ -2.06
USH1CQ9Y6N9 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.2□□□□□ -2.06
USH1CQ9Y6N9 MIR4448-201ENST00000584360 86 ntBASIC2.2□□□□□ -2.06
USH1CQ9Y6N9 RPS15AP11-201ENST00000594193 385 ntBASIC2.2□□□□□ -2.06
USH1CQ9Y6N9 AL022067.1-201ENST00000602426 454 ntBASIC2.2□□□□□ -2.06
USH1CQ9Y6N9 AL355877.2-201ENST00000603670 358 ntBASIC2.2□□□□□ -2.06
USH1CQ9Y6N9 AC007621.1-201ENST00000604544 437 ntBASIC2.2□□□□□ -2.06
USH1CQ9Y6N9 APOOP1-201ENST00000604695 592 ntBASIC2.2□□□□□ -2.06
USH1CQ9Y6N9 AC026790.2-201ENST00000606282 430 ntBASIC2.2□□□□□ -2.06
USH1CQ9Y6N9 AC107294.1-201ENST00000609524 467 ntBASIC2.2□□□□□ -2.06
USH1CQ9Y6N9 AC046143.2-201ENST00000609789 160 ntBASIC2.2□□□□□ -2.06
USH1CQ9Y6N9 AL354696.1-201ENST00000614652 497 ntBASIC2.2□□□□□ -2.06
USH1CQ9Y6N9 AC245884.12-201ENST00000615364 59 ntBASIC2.2□□□□□ -2.06
USH1CQ9Y6N9 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC2.2□□□□□ -2.06
USH1CQ9Y6N9 AL109809.4-201ENST00000603520 2185 ntBASIC2.2□□□□□ -2.06
USH1CQ9Y6N9 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC2.2□□□□□ -2.06
USH1CQ9Y6N9 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
USH1CQ9Y6N9 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
USH1CQ9Y6N9 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.2□□□□□ -2.06
USH1CQ9Y6N9 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
USH1CQ9Y6N9 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
USH1CQ9Y6N9 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
USH1CQ9Y6N9 MTCO1P4-201ENST00000520516 1409 ntBASIC2.19□□□□□ -2.06
USH1CQ9Y6N9 AC005832.2-201ENST00000538921 1430 ntBASIC2.19□□□□□ -2.06
USH1CQ9Y6N9 OR4G2P-202ENST00000641004 1759 ntBASIC2.19□□□□□ -2.06
USH1CQ9Y6N9 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
USH1CQ9Y6N9 AL445529.1-201ENST00000398713 389 ntBASIC2.19□□□□□ -2.06
USH1CQ9Y6N9 CCDC58P2-201ENST00000417131 366 ntBASIC2.19□□□□□ -2.06
USH1CQ9Y6N9 AC027644.1-201ENST00000419595 298 ntBASIC2.19□□□□□ -2.06
USH1CQ9Y6N9 AL139413.1-201ENST00000421309 217 ntBASIC2.19□□□□□ -2.06
USH1CQ9Y6N9 FGF7P5-201ENST00000441829 291 ntBASIC2.19□□□□□ -2.06
USH1CQ9Y6N9 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC2.19□□□□□ -2.06
USH1CQ9Y6N9 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC2.19□□□□□ -2.06
USH1CQ9Y6N9 RPL23AP7-203ENST00000449021 469 ntBASIC2.19□□□□□ -2.06
USH1CQ9Y6N9 AC108938.1-201ENST00000451204 136 ntBASIC2.19□□□□□ -2.06
USH1CQ9Y6N9 AL021397.1-201ENST00000451806 248 ntBASIC2.19□□□□□ -2.06
USH1CQ9Y6N9 MRPL42P4-201ENST00000453267 443 ntBASIC2.19□□□□□ -2.06
USH1CQ9Y6N9 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC2.19□□□□□ -2.06
USH1CQ9Y6N9 RNU7-26P-201ENST00000458980 63 ntBASIC2.19□□□□□ -2.06
USH1CQ9Y6N9 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC2.19□□□□□ -2.06
USH1CQ9Y6N9 FAM172BP-201ENST00000487497 1089 ntBASIC2.19□□□□□ -2.06
USH1CQ9Y6N9 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC2.19□□□□□ -2.06
USH1CQ9Y6N9 MTCYBP17-201ENST00000503579 789 ntBASIC2.19□□□□□ -2.06
USH1CQ9Y6N9 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC2.19□□□□□ -2.06
USH1CQ9Y6N9 RNU6-1282P-201ENST00000516735 96 ntBASIC2.19□□□□□ -2.06
USH1CQ9Y6N9 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC2.19□□□□□ -2.06
USH1CQ9Y6N9 ATP5F1P5-201ENST00000526403 760 ntBASIC2.19□□□□□ -2.06
USH1CQ9Y6N9 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC2.19□□□□□ -2.06
USH1CQ9Y6N9 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC2.19□□□□□ -2.06
USH1CQ9Y6N9 AC027807.1-201ENST00000559921 996 ntBASIC2.19□□□□□ -2.06
USH1CQ9Y6N9 MIR4435-1-201ENST00000582552 80 ntBASIC2.19□□□□□ -2.06
USH1CQ9Y6N9 MIR5002-201ENST00000584713 97 ntBASIC2.19□□□□□ -2.06
USH1CQ9Y6N9 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
USH1CQ9Y6N9 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.19□□□□□ -2.06
USH1CQ9Y6N9 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.19□□□□□ -2.06
USH1CQ9Y6N9 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.19□□□□□ -2.06
USH1CQ9Y6N9 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.19□□□□□ -2.06
USH1CQ9Y6N9 AL049641.1-201ENST00000441055 1948 ntBASIC2.19□□□□□ -2.06
USH1CQ9Y6N9 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC2.19□□□□□ -2.06
USH1CQ9Y6N9 ZNF658B-202ENST00000615961 3375 ntBASIC2.18□□□□□ -2.06
USH1CQ9Y6N9 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC2.18□□□□□ -2.06
USH1CQ9Y6N9 SNORA68.1-201ENST00000364537 132 ntBASIC2.18□□□□□ -2.06
USH1CQ9Y6N9 MIR514A1-201ENST00000385133 98 ntBASIC2.18□□□□□ -2.06
USH1CQ9Y6N9 VN1R51P-201ENST00000411675 945 ntBASIC2.18□□□□□ -2.06
USH1CQ9Y6N9 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC2.18□□□□□ -2.06
USH1CQ9Y6N9 AC018630.2-202ENST00000422992 927 ntBASIC2.18□□□□□ -2.06
USH1CQ9Y6N9 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.18□□□□□ -2.06
USH1CQ9Y6N9 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC2.18□□□□□ -2.06
USH1CQ9Y6N9 GTF2IP20-201ENST00000431663 360 ntBASIC2.18□□□□□ -2.06
USH1CQ9Y6N9 UBE2V1P13-201ENST00000436983 439 ntBASIC2.18□□□□□ -2.06
USH1CQ9Y6N9 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
USH1CQ9Y6N9 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC2.18□□□□□ -2.06
USH1CQ9Y6N9 OFD1P3Y-201ENST00000453312 783 ntBASIC2.18□□□□□ -2.06
USH1CQ9Y6N9 MTND2P24-201ENST00000453434 806 ntBASIC2.18□□□□□ -2.06
USH1CQ9Y6N9 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC2.18□□□□□ -2.06
USH1CQ9Y6N9 AC234781.5-201ENST00000508429 271 ntBASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms