Protein–RNA interactions for Protein: Q9Y4C0

NRXN3, Neurexin-3, humanhuman

Predictions only

Length 1,643 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NRXN3Q9Y4C0 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
NRXN3Q9Y4C0 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
NRXN3Q9Y4C0 RNU1-148P-201ENST00000384472 162 ntBASIC1.61□□□□□ -2.15
NRXN3Q9Y4C0 AC016769.3-201ENST00000396562 315 ntBASIC1.61□□□□□ -2.15
NRXN3Q9Y4C0 HMGN1P14-201ENST00000412459 517 ntBASIC1.61□□□□□ -2.15
NRXN3Q9Y4C0 CASP3P1-201ENST00000446037 609 ntBASIC1.61□□□□□ -2.15
NRXN3Q9Y4C0 AL136380.1-201ENST00000447970 162 ntBASIC1.61□□□□□ -2.15
NRXN3Q9Y4C0 SNRPFP3-201ENST00000457792 225 ntBASIC1.61□□□□□ -2.15
NRXN3Q9Y4C0 RPL30P12-201ENST00000474666 353 ntBASIC1.61□□□□□ -2.15
NRXN3Q9Y4C0 AC087343.1-201ENST00000477341 475 ntBASIC1.61□□□□□ -2.15
NRXN3Q9Y4C0 AC125611.2-201ENST00000551907 647 ntBASIC1.61□□□□□ -2.15
NRXN3Q9Y4C0 AL121821.2-201ENST00000556081 394 ntBASIC1.61□□□□□ -2.15
NRXN3Q9Y4C0 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.61□□□□□ -2.15
NRXN3Q9Y4C0 DDX43P2-201ENST00000604753 1354 ntBASIC1.61□□□□□ -2.15
NRXN3Q9Y4C0 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC1.61□□□□□ -2.15
NRXN3Q9Y4C0 RNU6-234P-201ENST00000365229 104 ntBASIC1.6□□□□□ -2.15
NRXN3Q9Y4C0 Y_RNA.393-201ENST00000383936 102 ntBASIC1.6□□□□□ -2.15
NRXN3Q9Y4C0 RNU6-882P-201ENST00000391025 103 ntBASIC1.6□□□□□ -2.15
NRXN3Q9Y4C0 RPS23P3-201ENST00000470993 430 ntBASIC1.6□□□□□ -2.15
NRXN3Q9Y4C0 MRPL42P6-201ENST00000486397 371 ntBASIC1.6□□□□□ -2.15
NRXN3Q9Y4C0 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.6□□□□□ -2.15
NRXN3Q9Y4C0 SNORD39.2-201ENST00000579995 76 ntBASIC1.6□□□□□ -2.15
NRXN3Q9Y4C0 CENPCP1-201ENST00000533085 2578 ntBASIC1.6□□□□□ -2.15
NRXN3Q9Y4C0 MFSD8-213ENST00000641134 1327 ntBASIC1.59□□□□□ -2.15
NRXN3Q9Y4C0 CYCSP33-201ENST00000414485 327 ntBASIC1.59□□□□□ -2.15
NRXN3Q9Y4C0 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC1.59□□□□□ -2.15
NRXN3Q9Y4C0 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC1.59□□□□□ -2.15
NRXN3Q9Y4C0 AC087854.1-201ENST00000519706 414 ntBASIC1.59□□□□□ -2.15
NRXN3Q9Y4C0 MTCO1P47-201ENST00000523889 1271 ntBASIC1.59□□□□□ -2.15
NRXN3Q9Y4C0 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC1.59□□□□□ -2.15
NRXN3Q9Y4C0 MIR5000-201ENST00000577717 103 ntBASIC1.59□□□□□ -2.15
NRXN3Q9Y4C0 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC1.59□□□□□ -2.15
NRXN3Q9Y4C0 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.59□□□□□ -2.15
NRXN3Q9Y4C0 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC1.59□□□□□ -2.15
NRXN3Q9Y4C0 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC1.59□□□□□ -2.16
NRXN3Q9Y4C0 AC135776.4-201ENST00000624300 1904 ntBASIC1.59□□□□□ -2.16
NRXN3Q9Y4C0 ARL5AP3-201ENST00000439327 386 ntBASIC1.58□□□□□ -2.16
NRXN3Q9Y4C0 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.58□□□□□ -2.16
NRXN3Q9Y4C0 RNU1-104P-201ENST00000517280 175 ntBASIC1.58□□□□□ -2.16
NRXN3Q9Y4C0 AC025918.2-201ENST00000558683 763 ntBASIC1.58□□□□□ -2.16
NRXN3Q9Y4C0 AC123912.5-201ENST00000605470 343 ntBASIC1.58□□□□□ -2.16
NRXN3Q9Y4C0 AC098657.3-201ENST00000620434 263 ntBASIC1.58□□□□□ -2.16
NRXN3Q9Y4C0 AC079597.1-201ENST00000624306 508 ntBASIC1.58□□□□□ -2.16
NRXN3Q9Y4C0 AL022400.1-201ENST00000423946 935 ntBASIC1.58□□□□□ -2.16
NRXN3Q9Y4C0 AL583843.1-201ENST00000456070 346 ntBASIC1.58□□□□□ -2.16
NRXN3Q9Y4C0 AC108059.3-201ENST00000456388 214 ntBASIC1.58□□□□□ -2.16
NRXN3Q9Y4C0 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.58□□□□□ -2.16
NRXN3Q9Y4C0 AC090897.2-201ENST00000581715 130 ntBASIC1.58□□□□□ -2.16
NRXN3Q9Y4C0 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC1.58□□□□□ -2.16
NRXN3Q9Y4C0 AC012640.5-201ENST00000623897 319 ntBASIC1.58□□□□□ -2.16
NRXN3Q9Y4C0 AC008133.2-201ENST00000624540 351 ntBASIC1.58□□□□□ -2.16
NRXN3Q9Y4C0 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
NRXN3Q9Y4C0 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC1.57□□□□□ -2.16
NRXN3Q9Y4C0 CD24P4-201ENST00000382840 243 ntBASIC1.57□□□□□ -2.16
NRXN3Q9Y4C0 SNORA18.2-201ENST00000383865 132 ntBASIC1.57□□□□□ -2.16
NRXN3Q9Y4C0 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC1.57□□□□□ -2.16
NRXN3Q9Y4C0 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
NRXN3Q9Y4C0 Z75741.2-201ENST00000417272 1167 ntBASIC1.57□□□□□ -2.16
NRXN3Q9Y4C0 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
NRXN3Q9Y4C0 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC1.57□□□□□ -2.16
NRXN3Q9Y4C0 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.57□□□□□ -2.16
NRXN3Q9Y4C0 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC1.57□□□□□ -2.16
NRXN3Q9Y4C0 HMGN2P16-201ENST00000456802 261 ntBASIC1.57□□□□□ -2.16
NRXN3Q9Y4C0 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC1.57□□□□□ -2.16
NRXN3Q9Y4C0 AC118942.1-201ENST00000529674 1035 ntBASIC1.57□□□□□ -2.16
NRXN3Q9Y4C0 SUB1P4-201ENST00000566062 339 ntBASIC1.57□□□□□ -2.16
NRXN3Q9Y4C0 AC024619.4-201ENST00000580924 316 ntBASIC1.57□□□□□ -2.16
NRXN3Q9Y4C0 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC1.57□□□□□ -2.16
NRXN3Q9Y4C0 AC021755.4-201ENST00000616620 456 ntBASIC1.57□□□□□ -2.16
NRXN3Q9Y4C0 AC138915.1-201ENST00000565427 1685 ntBASIC1.56□□□□□ -2.16
NRXN3Q9Y4C0 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
NRXN3Q9Y4C0 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC1.56□□□□□ -2.16
NRXN3Q9Y4C0 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.56□□□□□ -2.16
NRXN3Q9Y4C0 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC1.56□□□□□ -2.16
NRXN3Q9Y4C0 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC1.56□□□□□ -2.16
NRXN3Q9Y4C0 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC1.56□□□□□ -2.16
NRXN3Q9Y4C0 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC1.56□□□□□ -2.16
NRXN3Q9Y4C0 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC1.56□□□□□ -2.16
NRXN3Q9Y4C0 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.56□□□□□ -2.16
NRXN3Q9Y4C0 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC1.56□□□□□ -2.16
NRXN3Q9Y4C0 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC1.56□□□□□ -2.16
NRXN3Q9Y4C0 AC008962.1-201ENST00000605729 304 ntBASIC1.56□□□□□ -2.16
NRXN3Q9Y4C0 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.56□□□□□ -2.16
NRXN3Q9Y4C0 SNRPEP10-201ENST00000420249 274 ntBASIC1.55□□□□□ -2.16
NRXN3Q9Y4C0 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.55□□□□□ -2.16
NRXN3Q9Y4C0 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.55□□□□□ -2.16
NRXN3Q9Y4C0 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC1.55□□□□□ -2.16
NRXN3Q9Y4C0 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC1.55□□□□□ -2.16
NRXN3Q9Y4C0 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.55□□□□□ -2.16
NRXN3Q9Y4C0 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC1.55□□□□□ -2.16
NRXN3Q9Y4C0 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.55□□□□□ -2.16
NRXN3Q9Y4C0 MTCO2P32-201ENST00000514865 403 ntBASIC1.55□□□□□ -2.16
NRXN3Q9Y4C0 RNA5SP476-201ENST00000516613 103 ntBASIC1.55□□□□□ -2.16
NRXN3Q9Y4C0 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC1.55□□□□□ -2.16
NRXN3Q9Y4C0 VN1R107P-201ENST00000601784 209 ntBASIC1.55□□□□□ -2.16
NRXN3Q9Y4C0 AL445493.3-201ENST00000619568 477 ntBASIC1.55□□□□□ -2.16
NRXN3Q9Y4C0 AC007275.1-201ENST00000621243 671 ntBASIC1.55□□□□□ -2.16
NRXN3Q9Y4C0 RNY1P4-201ENST00000384595 115 ntBASIC1.55□□□□□ -2.16
NRXN3Q9Y4C0 AL355497.1-201ENST00000406262 551 ntBASIC1.55□□□□□ -2.16
NRXN3Q9Y4C0 STAT4-203ENST00000409995 709 ntTSL 5 BASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 118 ms