Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 RNU6-433P-201ENST00000363216 104 ntBASIC2.38□□□□□ -2.03
KCNIP3Q9Y2W7 RNU6-931P-201ENST00000363850 107 ntBASIC2.38□□□□□ -2.03
KCNIP3Q9Y2W7 SNORA25.6-201ENST00000364121 118 ntBASIC2.38□□□□□ -2.03
KCNIP3Q9Y2W7 RNU1-33P-201ENST00000364249 162 ntBASIC2.38□□□□□ -2.03
KCNIP3Q9Y2W7 SNORA56-201ENST00000383966 129 ntBASIC2.38□□□□□ -2.03
KCNIP3Q9Y2W7 MIR19A-201ENST00000384878 82 ntBASIC2.38□□□□□ -2.03
KCNIP3Q9Y2W7 U3.19-201ENST00000390893 196 ntBASIC2.38□□□□□ -2.03
KCNIP3Q9Y2W7 MIR937-201ENST00000401271 86 ntBASIC2.38□□□□□ -2.03
KCNIP3Q9Y2W7 SNORA11B-201ENST00000408175 129 ntBASIC2.38□□□□□ -2.03
KCNIP3Q9Y2W7 RN7SKP202-201ENST00000410439 330 ntBASIC2.38□□□□□ -2.03
KCNIP3Q9Y2W7 CYCSP19-201ENST00000411715 316 ntBASIC2.38□□□□□ -2.03
KCNIP3Q9Y2W7 AL513477.1-202ENST00000417061 214 ntBASIC2.38□□□□□ -2.03
KCNIP3Q9Y2W7 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC2.38□□□□□ -2.03
KCNIP3Q9Y2W7 AC098614.2-201ENST00000426040 255 ntBASIC2.38□□□□□ -2.03
KCNIP3Q9Y2W7 MTND1P32-201ENST00000433043 938 ntBASIC2.38□□□□□ -2.03
KCNIP3Q9Y2W7 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC2.38□□□□□ -2.03
KCNIP3Q9Y2W7 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.38□□□□□ -2.03
KCNIP3Q9Y2W7 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC2.38□□□□□ -2.03
KCNIP3Q9Y2W7 FAM103A2P-201ENST00000444122 354 ntBASIC2.38□□□□□ -2.03
KCNIP3Q9Y2W7 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC2.38□□□□□ -2.03
KCNIP3Q9Y2W7 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.38□□□□□ -2.03
KCNIP3Q9Y2W7 RPL31P41-201ENST00000477967 372 ntBASIC2.38□□□□□ -2.03
KCNIP3Q9Y2W7 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC2.38□□□□□ -2.03
KCNIP3Q9Y2W7 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC2.38□□□□□ -2.03
KCNIP3Q9Y2W7 SUMO2P6-201ENST00000505273 288 ntBASIC2.38□□□□□ -2.03
KCNIP3Q9Y2W7 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC2.38□□□□□ -2.03
KCNIP3Q9Y2W7 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC2.38□□□□□ -2.03
KCNIP3Q9Y2W7 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.38□□□□□ -2.03
KCNIP3Q9Y2W7 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC2.38□□□□□ -2.03
KCNIP3Q9Y2W7 AC068587.4-201ENST00000533893 186 ntBASIC2.38□□□□□ -2.03
KCNIP3Q9Y2W7 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.38□□□□□ -2.03
KCNIP3Q9Y2W7 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.38□□□□□ -2.03
KCNIP3Q9Y2W7 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.38□□□□□ -2.03
KCNIP3Q9Y2W7 HMGN2P15-201ENST00000585707 270 ntBASIC2.38□□□□□ -2.03
KCNIP3Q9Y2W7 AC245884.10-201ENST00000597355 337 ntBASIC2.38□□□□□ -2.03
KCNIP3Q9Y2W7 AC004908.2-201ENST00000609090 574 ntBASIC2.38□□□□□ -2.03
KCNIP3Q9Y2W7 AL355493.4-201ENST00000618530 292 ntBASIC2.38□□□□□ -2.03
KCNIP3Q9Y2W7 AP001002.2-201ENST00000625137 386 ntBASIC2.38□□□□□ -2.03
KCNIP3Q9Y2W7 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
KCNIP3Q9Y2W7 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
KCNIP3Q9Y2W7 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.38□□□□□ -2.03
KCNIP3Q9Y2W7 AC026241.1-201ENST00000517873 2142 ntBASIC2.38□□□□□ -2.03
KCNIP3Q9Y2W7 AC093536.2-201ENST00000565257 1406 ntBASIC2.37□□□□□ -2.03
KCNIP3Q9Y2W7 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.37□□□□□ -2.03
KCNIP3Q9Y2W7 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC2.37□□□□□ -2.03
KCNIP3Q9Y2W7 FAM133CP-201ENST00000332869 704 ntBASIC2.37□□□□□ -2.03
KCNIP3Q9Y2W7 MIR141-201ENST00000384975 95 ntBASIC2.37□□□□□ -2.03
KCNIP3Q9Y2W7 MIR888-201ENST00000401186 77 ntBASIC2.37□□□□□ -2.03
KCNIP3Q9Y2W7 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.37□□□□□ -2.03
KCNIP3Q9Y2W7 MTCO2P21-201ENST00000419780 677 ntBASIC2.37□□□□□ -2.03
KCNIP3Q9Y2W7 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC2.37□□□□□ -2.03
KCNIP3Q9Y2W7 USP12PX-201ENST00000432383 1057 ntBASIC2.37□□□□□ -2.03
KCNIP3Q9Y2W7 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
KCNIP3Q9Y2W7 AC020550.1-201ENST00000447385 163 ntBASIC2.37□□□□□ -2.03
KCNIP3Q9Y2W7 AC009220.1-201ENST00000451614 275 ntBASIC2.37□□□□□ -2.03
KCNIP3Q9Y2W7 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC2.37□□□□□ -2.03
KCNIP3Q9Y2W7 AC013267.1-201ENST00000458227 267 ntBASIC2.37□□□□□ -2.03
KCNIP3Q9Y2W7 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC2.37□□□□□ -2.03
KCNIP3Q9Y2W7 RPL27AP5-201ENST00000469428 449 ntBASIC2.37□□□□□ -2.03
KCNIP3Q9Y2W7 AL160314.1-201ENST00000490836 438 ntBASIC2.37□□□□□ -2.03
KCNIP3Q9Y2W7 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.37□□□□□ -2.03
KCNIP3Q9Y2W7 AC091951.3-201ENST00000504093 246 ntBASIC2.37□□□□□ -2.03
KCNIP3Q9Y2W7 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.37□□□□□ -2.03
KCNIP3Q9Y2W7 AC113155.1-201ENST00000511141 769 ntBASIC2.37□□□□□ -2.03
KCNIP3Q9Y2W7 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC2.37□□□□□ -2.03
KCNIP3Q9Y2W7 AC026403.1-201ENST00000518938 295 ntBASIC2.37□□□□□ -2.03
KCNIP3Q9Y2W7 AC022634.1-201ENST00000520765 532 ntBASIC2.37□□□□□ -2.03
KCNIP3Q9Y2W7 AC007458.1-201ENST00000542812 373 ntBASIC2.37□□□□□ -2.03
KCNIP3Q9Y2W7 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC2.37□□□□□ -2.03
KCNIP3Q9Y2W7 MIR3922-201ENST00000585192 84 ntBASIC2.37□□□□□ -2.03
KCNIP3Q9Y2W7 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.37□□□□□ -2.03
KCNIP3Q9Y2W7 AC021171.1-201ENST00000603137 706 ntBASIC2.37□□□□□ -2.03
KCNIP3Q9Y2W7 AC097468.3-201ENST00000607956 456 ntBASIC2.37□□□□□ -2.03
KCNIP3Q9Y2W7 AC239868.4-201ENST00000608318 671 ntBASIC2.37□□□□□ -2.03
KCNIP3Q9Y2W7 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.37□□□□□ -2.03
KCNIP3Q9Y2W7 AL161734.1-201ENST00000609720 557 ntBASIC2.37□□□□□ -2.03
KCNIP3Q9Y2W7 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.37□□□□□ -2.03
KCNIP3Q9Y2W7 AC016597.2-201ENST00000613256 341 ntBASIC2.37□□□□□ -2.03
KCNIP3Q9Y2W7 AC012150.2-201ENST00000621300 544 ntBASIC2.37□□□□□ -2.03
KCNIP3Q9Y2W7 AC244100.1-202ENST00000621554 382 ntBASIC2.37□□□□□ -2.03
KCNIP3Q9Y2W7 AL356596.1-201ENST00000624230 379 ntBASIC2.37□□□□□ -2.03
KCNIP3Q9Y2W7 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC2.37□□□□□ -2.03
KCNIP3Q9Y2W7 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
KCNIP3Q9Y2W7 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.37□□□□□ -2.03
KCNIP3Q9Y2W7 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.37□□□□□ -2.03
KCNIP3Q9Y2W7 NF1-214ENST00000490416 1329 ntTSL 3 BASIC2.37□□□□□ -2.03
KCNIP3Q9Y2W7 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.37□□□□□ -2.03
KCNIP3Q9Y2W7 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.37□□□□□ -2.03
KCNIP3Q9Y2W7 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC2.37□□□□□ -2.03
KCNIP3Q9Y2W7 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.37□□□□□ -2.03
KCNIP3Q9Y2W7 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.36□□□□□ -2.03
KCNIP3Q9Y2W7 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
KCNIP3Q9Y2W7 RPL21P132-201ENST00000331267 462 ntBASIC2.36□□□□□ -2.03
KCNIP3Q9Y2W7 SNORA71.1-201ENST00000364523 117 ntBASIC2.36□□□□□ -2.03
KCNIP3Q9Y2W7 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC2.36□□□□□ -2.03
KCNIP3Q9Y2W7 DEFA7P-201ENST00000382676 285 ntBASIC2.36□□□□□ -2.03
KCNIP3Q9Y2W7 MIR144-201ENST00000384886 86 ntBASIC2.36□□□□□ -2.03
KCNIP3Q9Y2W7 AL513475.1-201ENST00000406602 315 ntBASIC2.36□□□□□ -2.03
KCNIP3Q9Y2W7 RNU6-584P-201ENST00000410350 95 ntBASIC2.36□□□□□ -2.03
KCNIP3Q9Y2W7 RPL21P24-201ENST00000413752 448 ntBASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms