Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
CDK11AQ9UQ88 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
CDK11AQ9UQ88 AC009902.3-201ENST00000606235 2172 ntBASIC5.39□□□□□ -1.55
CDK11AQ9UQ88 MTND5P33-201ENST00000571250 1450 ntBASIC5.39□□□□□ -1.55
CDK11AQ9UQ88 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
CDK11AQ9UQ88 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC5.38□□□□□ -1.55
CDK11AQ9UQ88 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CDK11AQ9UQ88 MTND5P26-201ENST00000426018 1752 ntBASIC5.38□□□□□ -1.55
CDK11AQ9UQ88 GNG5P1-201ENST00000255500 204 ntBASIC5.38□□□□□ -1.55
CDK11AQ9UQ88 Y_RNA.41-201ENST00000362646 102 ntBASIC5.38□□□□□ -1.55
CDK11AQ9UQ88 RNU6-517P-201ENST00000384362 110 ntBASIC5.38□□□□□ -1.55
CDK11AQ9UQ88 AL138878.1-201ENST00000405131 347 ntBASIC5.38□□□□□ -1.55
CDK11AQ9UQ88 AC017079.2-201ENST00000416102 485 ntBASIC5.38□□□□□ -1.55
CDK11AQ9UQ88 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC5.38□□□□□ -1.55
CDK11AQ9UQ88 ARPC3P1-201ENST00000437218 533 ntBASIC5.38□□□□□ -1.55
CDK11AQ9UQ88 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC5.38□□□□□ -1.55
CDK11AQ9UQ88 AC006028.1-201ENST00000438379 402 ntBASIC5.38□□□□□ -1.55
CDK11AQ9UQ88 AC104308.1-201ENST00000454621 333 ntBASIC5.38□□□□□ -1.55
CDK11AQ9UQ88 SNORD121B-201ENST00000458838 81 ntBASIC5.38□□□□□ -1.55
CDK11AQ9UQ88 RPS23P3-201ENST00000470993 430 ntBASIC5.38□□□□□ -1.55
CDK11AQ9UQ88 TAF8-207ENST00000482432 556 ntTSL 2 BASIC5.38□□□□□ -1.55
CDK11AQ9UQ88 MTND1P3-201ENST00000484956 952 ntBASIC5.38□□□□□ -1.55
CDK11AQ9UQ88 RNU1-103P-201ENST00000516502 125 ntBASIC5.38□□□□□ -1.55
CDK11AQ9UQ88 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC5.38□□□□□ -1.55
CDK11AQ9UQ88 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC5.38□□□□□ -1.55
CDK11AQ9UQ88 AC060771.1-201ENST00000582031 164 ntBASIC5.38□□□□□ -1.55
CDK11AQ9UQ88 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC5.38□□□□□ -1.55
CDK11AQ9UQ88 HMGN1P30-201ENST00000589286 268 ntBASIC5.38□□□□□ -1.55
CDK11AQ9UQ88 KLKP1-201ENST00000595979 403 ntBASIC5.38□□□□□ -1.55
CDK11AQ9UQ88 SCARNA15.3-201ENST00000626315 122 ntBASIC5.38□□□□□ -1.55
CDK11AQ9UQ88 SCARNA4.1-201ENST00000628597 123 ntBASIC5.38□□□□□ -1.55
CDK11AQ9UQ88 AC068137.3-201ENST00000639191 341 ntBASIC5.38□□□□□ -1.55
CDK11AQ9UQ88 AC073869.6-201ENST00000640656 341 ntBASIC5.38□□□□□ -1.55
CDK11AQ9UQ88 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CDK11AQ9UQ88 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
CDK11AQ9UQ88 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CDK11AQ9UQ88 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC5.37□□□□□ -1.55
CDK11AQ9UQ88 NCAPGP1-201ENST00000505112 1814 ntBASIC5.37□□□□□ -1.55
CDK11AQ9UQ88 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CDK11AQ9UQ88 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
CDK11AQ9UQ88 MIR423-201ENST00000362201 94 ntBASIC5.37□□□□□ -1.55
CDK11AQ9UQ88 Y_RNA.516-201ENST00000384541 124 ntBASIC5.37□□□□□ -1.55
CDK11AQ9UQ88 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
CDK11AQ9UQ88 AL591034.1-201ENST00000407447 340 ntBASIC5.37□□□□□ -1.55
CDK11AQ9UQ88 AC078974.1-201ENST00000411597 223 ntBASIC5.37□□□□□ -1.55
CDK11AQ9UQ88 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC5.37□□□□□ -1.55
CDK11AQ9UQ88 MTCO1P39-201ENST00000426148 480 ntBASIC5.37□□□□□ -1.55
CDK11AQ9UQ88 AC009961.2-201ENST00000435771 251 ntBASIC5.37□□□□□ -1.55
CDK11AQ9UQ88 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC5.37□□□□□ -1.55
CDK11AQ9UQ88 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC5.37□□□□□ -1.55
CDK11AQ9UQ88 SSXP4-201ENST00000451349 245 ntBASIC5.37□□□□□ -1.55
CDK11AQ9UQ88 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC5.37□□□□□ -1.55
CDK11AQ9UQ88 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC5.37□□□□□ -1.55
CDK11AQ9UQ88 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC5.37□□□□□ -1.55
CDK11AQ9UQ88 RN7SL504P-201ENST00000494496 287 ntBASIC5.37□□□□□ -1.55
CDK11AQ9UQ88 AL117351.2-201ENST00000513571 157 ntBASIC5.37□□□□□ -1.55
CDK11AQ9UQ88 AP003497.1-201ENST00000528472 562 ntBASIC5.37□□□□□ -1.55
CDK11AQ9UQ88 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC5.37□□□□□ -1.55
CDK11AQ9UQ88 MIR3913-1-201ENST00000577744 102 ntBASIC5.37□□□□□ -1.55
CDK11AQ9UQ88 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC5.37□□□□□ -1.55
CDK11AQ9UQ88 MIR4276-201ENST00000584832 70 ntBASIC5.37□□□□□ -1.55
CDK11AQ9UQ88 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC5.37□□□□□ -1.55
CDK11AQ9UQ88 BDH2P1-201ENST00000602288 736 ntBASIC5.37□□□□□ -1.55
CDK11AQ9UQ88 AC068790.3-201ENST00000602988 553 ntBASIC5.37□□□□□ -1.55
CDK11AQ9UQ88 AC107304.1-201ENST00000604229 296 ntBASIC5.37□□□□□ -1.55
CDK11AQ9UQ88 BX664608.1-201ENST00000610519 487 ntBASIC5.37□□□□□ -1.55
CDK11AQ9UQ88 AC013476.2-201ENST00000614456 459 ntBASIC5.37□□□□□ -1.55
CDK11AQ9UQ88 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CDK11AQ9UQ88 AC002550.2-201ENST00000621246 394 ntBASIC5.37□□□□□ -1.55
CDK11AQ9UQ88 OR5AK4P-201ENST00000635912 903 ntBASIC5.37□□□□□ -1.55
CDK11AQ9UQ88 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CDK11AQ9UQ88 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC5.36□□□□□ -1.55
CDK11AQ9UQ88 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CDK11AQ9UQ88 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
CDK11AQ9UQ88 UBE2V1P10-201ENST00000414685 269 ntBASIC5.36□□□□□ -1.55
CDK11AQ9UQ88 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC5.36□□□□□ -1.55
CDK11AQ9UQ88 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC5.36□□□□□ -1.55
CDK11AQ9UQ88 RPS29P31-201ENST00000446147 164 ntBASIC5.36□□□□□ -1.55
CDK11AQ9UQ88 Z75741.1-201ENST00000446793 314 ntBASIC5.36□□□□□ -1.55
CDK11AQ9UQ88 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC5.36□□□□□ -1.55
CDK11AQ9UQ88 NDUFAF4P4-201ENST00000454883 502 ntBASIC5.36□□□□□ -1.55
CDK11AQ9UQ88 RPS3AP17-201ENST00000472594 777 ntBASIC5.36□□□□□ -1.55
CDK11AQ9UQ88 AL049830.2-201ENST00000480072 201 ntBASIC5.36□□□□□ -1.55
CDK11AQ9UQ88 BTF3L4P4-201ENST00000506381 449 ntBASIC5.36□□□□□ -1.55
CDK11AQ9UQ88 RNU6-430P-201ENST00000517078 107 ntBASIC5.36□□□□□ -1.55
CDK11AQ9UQ88 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC5.36□□□□□ -1.55
CDK11AQ9UQ88 AP003122.4-201ENST00000530980 758 ntBASIC5.36□□□□□ -1.55
CDK11AQ9UQ88 AC016957.1-201ENST00000534895 309 ntBASIC5.36□□□□□ -1.55
CDK11AQ9UQ88 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC5.36□□□□□ -1.55
CDK11AQ9UQ88 AC136619.2-201ENST00000563361 631 ntBASIC5.36□□□□□ -1.55
CDK11AQ9UQ88 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC5.36□□□□□ -1.55
CDK11AQ9UQ88 AC012443.1-201ENST00000605605 231 ntBASIC5.36□□□□□ -1.55
CDK11AQ9UQ88 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC5.36□□□□□ -1.55
CDK11AQ9UQ88 AC092794.1-201ENST00000612734 582 ntBASIC5.36□□□□□ -1.55
CDK11AQ9UQ88 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CDK11AQ9UQ88 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CDK11AQ9UQ88 HSPA8P1-201ENST00000425843 1833 ntBASIC5.35□□□□□ -1.55
CDK11AQ9UQ88 RPL7P26-201ENST00000333817 754 ntBASIC5.35□□□□□ -1.55
CDK11AQ9UQ88 RNA5SP374-201ENST00000362939 125 ntBASIC5.35□□□□□ -1.55
CDK11AQ9UQ88 RNU6ATAC25P-201ENST00000408798 117 ntBASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 148.1 ms