Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 RNU6-251P-201ENST00000363235 104 ntBASIC1.91□□□□□ -2.1
VPS29Q9UBQ0 RNU4-52P-201ENST00000384209 138 ntBASIC1.91□□□□□ -2.1
VPS29Q9UBQ0 SNORA67.3-201ENST00000384366 140 ntBASIC1.91□□□□□ -2.1
VPS29Q9UBQ0 RNU6-220P-201ENST00000390919 107 ntBASIC1.91□□□□□ -2.1
VPS29Q9UBQ0 SNORD23.1-201ENST00000408212 104 ntBASIC1.91□□□□□ -2.1
VPS29Q9UBQ0 FCF1P2-201ENST00000415284 583 ntBASIC1.91□□□□□ -2.1
VPS29Q9UBQ0 NPM1P11-201ENST00000417106 855 ntBASIC1.91□□□□□ -2.1
VPS29Q9UBQ0 DPH3P2-201ENST00000422618 250 ntBASIC1.91□□□□□ -2.1
VPS29Q9UBQ0 HMGN2P38-201ENST00000423806 265 ntBASIC1.91□□□□□ -2.1
VPS29Q9UBQ0 ZDHHC20P2-201ENST00000424108 429 ntBASIC1.91□□□□□ -2.1
VPS29Q9UBQ0 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC1.91□□□□□ -2.1
VPS29Q9UBQ0 AL445646.1-201ENST00000431784 216 ntBASIC1.91□□□□□ -2.1
VPS29Q9UBQ0 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC1.91□□□□□ -2.1
VPS29Q9UBQ0 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC1.91□□□□□ -2.1
VPS29Q9UBQ0 AP002748.2-201ENST00000528671 348 ntBASIC1.91□□□□□ -2.1
VPS29Q9UBQ0 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC1.91□□□□□ -2.1
VPS29Q9UBQ0 AL391261.3-201ENST00000557194 520 ntBASIC1.91□□□□□ -2.1
VPS29Q9UBQ0 MIR5089-201ENST00000580047 84 ntBASIC1.91□□□□□ -2.1
VPS29Q9UBQ0 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC1.91□□□□□ -2.1
VPS29Q9UBQ0 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC1.91□□□□□ -2.1
VPS29Q9UBQ0 TUG1_1.1-201ENST00000610654 145 ntBASIC1.91□□□□□ -2.1
VPS29Q9UBQ0 AC006213.5-201ENST00000619673 288 ntBASIC1.91□□□□□ -2.1
VPS29Q9UBQ0 AC064859.1-201ENST00000624741 174 ntBASIC1.91□□□□□ -2.1
VPS29Q9UBQ0 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC1.91□□□□□ -2.1
VPS29Q9UBQ0 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
VPS29Q9UBQ0 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
VPS29Q9UBQ0 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
VPS29Q9UBQ0 ELF2P3-201ENST00000445099 1506 ntBASIC1.91□□□□□ -2.1
VPS29Q9UBQ0 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC1.9□□□□□ -2.1
VPS29Q9UBQ0 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.9□□□□□ -2.11
VPS29Q9UBQ0 Y_RNA.111-201ENST00000363248 100 ntBASIC1.9□□□□□ -2.11
VPS29Q9UBQ0 SNORA3.2-201ENST00000408221 125 ntBASIC1.9□□□□□ -2.11
VPS29Q9UBQ0 RNA5SP508-201ENST00000411327 119 ntBASIC1.9□□□□□ -2.11
VPS29Q9UBQ0 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.9□□□□□ -2.11
VPS29Q9UBQ0 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC1.9□□□□□ -2.11
VPS29Q9UBQ0 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC1.9□□□□□ -2.11
VPS29Q9UBQ0 AL050341.1-201ENST00000447743 313 ntBASIC1.9□□□□□ -2.11
VPS29Q9UBQ0 AL353705.4-201ENST00000449661 238 ntBASIC1.9□□□□□ -2.11
VPS29Q9UBQ0 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.9□□□□□ -2.11
VPS29Q9UBQ0 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC1.9□□□□□ -2.11
VPS29Q9UBQ0 RPL32P14-201ENST00000463196 378 ntBASIC1.9□□□□□ -2.11
VPS29Q9UBQ0 RPS27P21-201ENST00000486977 252 ntBASIC1.9□□□□□ -2.11
VPS29Q9UBQ0 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.9□□□□□ -2.11
VPS29Q9UBQ0 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC1.9□□□□□ -2.11
VPS29Q9UBQ0 AC114786.4-201ENST00000508771 728 ntBASIC1.9□□□□□ -2.11
VPS29Q9UBQ0 AC048346.1-201ENST00000510247 144 ntBASIC1.9□□□□□ -2.11
VPS29Q9UBQ0 AC114797.1-201ENST00000514003 728 ntBASIC1.9□□□□□ -2.11
VPS29Q9UBQ0 AC022483.1-201ENST00000514020 567 ntBASIC1.9□□□□□ -2.11
VPS29Q9UBQ0 RNU6-551P-201ENST00000516661 103 ntBASIC1.9□□□□□ -2.11
VPS29Q9UBQ0 MIR514B-201ENST00000516774 80 ntBASIC1.9□□□□□ -2.11
VPS29Q9UBQ0 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC1.9□□□□□ -2.11
VPS29Q9UBQ0 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC1.9□□□□□ -2.11
VPS29Q9UBQ0 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC1.9□□□□□ -2.11
VPS29Q9UBQ0 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC1.9□□□□□ -2.11
VPS29Q9UBQ0 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC1.9□□□□□ -2.11
VPS29Q9UBQ0 AC103710.1-201ENST00000610003 901 ntBASIC1.9□□□□□ -2.11
VPS29Q9UBQ0 DUXAP10-204ENST00000612052 616 ntBASIC1.9□□□□□ -2.11
VPS29Q9UBQ0 DUXAP9-208ENST00000622815 614 ntBASIC1.9□□□□□ -2.11
VPS29Q9UBQ0 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC1.9□□□□□ -2.11
VPS29Q9UBQ0 AC010149.2-201ENST00000637608 315 ntBASIC1.9□□□□□ -2.11
VPS29Q9UBQ0 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
VPS29Q9UBQ0 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
VPS29Q9UBQ0 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
VPS29Q9UBQ0 AC007785.2-201ENST00000598627 1916 ntBASIC1.89□□□□□ -2.11
VPS29Q9UBQ0 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
VPS29Q9UBQ0 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.89□□□□□ -2.11
VPS29Q9UBQ0 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC1.89□□□□□ -2.11
VPS29Q9UBQ0 HSPE1P11-201ENST00000339579 310 ntBASIC1.89□□□□□ -2.11
VPS29Q9UBQ0 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
VPS29Q9UBQ0 RN7SKP223-201ENST00000410582 62 ntBASIC1.89□□□□□ -2.11
VPS29Q9UBQ0 RNU6-1328P-201ENST00000410938 106 ntBASIC1.89□□□□□ -2.11
VPS29Q9UBQ0 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.89□□□□□ -2.11
VPS29Q9UBQ0 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC1.89□□□□□ -2.11
VPS29Q9UBQ0 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC1.89□□□□□ -2.11
VPS29Q9UBQ0 PSMA6P3-201ENST00000428242 164 ntBASIC1.89□□□□□ -2.11
VPS29Q9UBQ0 AL139415.2-201ENST00000431968 163 ntBASIC1.89□□□□□ -2.11
VPS29Q9UBQ0 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC1.89□□□□□ -2.11
VPS29Q9UBQ0 OSTCP8-201ENST00000445117 448 ntBASIC1.89□□□□□ -2.11
VPS29Q9UBQ0 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC1.89□□□□□ -2.11
VPS29Q9UBQ0 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC1.89□□□□□ -2.11
VPS29Q9UBQ0 AC022493.1-201ENST00000492984 337 ntBASIC1.89□□□□□ -2.11
VPS29Q9UBQ0 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC1.89□□□□□ -2.11
VPS29Q9UBQ0 AC023141.11-201ENST00000508864 202 ntBASIC1.89□□□□□ -2.11
VPS29Q9UBQ0 RNU6-1256P-201ENST00000516539 103 ntBASIC1.89□□□□□ -2.11
VPS29Q9UBQ0 SNORA48.10-201ENST00000516965 160 ntBASIC1.89□□□□□ -2.11
VPS29Q9UBQ0 AP005902.1-201ENST00000521358 186 ntBASIC1.89□□□□□ -2.11
VPS29Q9UBQ0 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
VPS29Q9UBQ0 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC1.89□□□□□ -2.11
VPS29Q9UBQ0 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC1.89□□□□□ -2.11
VPS29Q9UBQ0 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC1.89□□□□□ -2.11
VPS29Q9UBQ0 MIR4435-1-201ENST00000582552 80 ntBASIC1.89□□□□□ -2.11
VPS29Q9UBQ0 HMGN2P15-201ENST00000585707 270 ntBASIC1.89□□□□□ -2.11
VPS29Q9UBQ0 AC025588.2-201ENST00000604851 466 ntBASIC1.89□□□□□ -2.11
VPS29Q9UBQ0 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.89□□□□□ -2.11
VPS29Q9UBQ0 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC1.89□□□□□ -2.11
VPS29Q9UBQ0 AL109809.4-201ENST00000603520 2185 ntBASIC1.89□□□□□ -2.11
VPS29Q9UBQ0 AL359851.1-201ENST00000569460 4997 ntBASIC1.89□□□□□ -2.11
VPS29Q9UBQ0 PAPPA-AS1-201ENST00000445861 2450 ntBASIC1.89□□□□□ -2.11
VPS29Q9UBQ0 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
VPS29Q9UBQ0 AC010329.5-201ENST00000623497 2174 ntBASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms