Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 RNU6-1120P-201ENST00000362988 108 ntBASIC4.05□□□□□ -1.76
COL20A1Q9P218 RN7SKP44-201ENST00000363602 316 ntBASIC4.05□□□□□ -1.76
COL20A1Q9P218 RNU4-12P-201ENST00000365233 139 ntBASIC4.05□□□□□ -1.76
COL20A1Q9P218 Y_RNA.554-201ENST00000384672 102 ntBASIC4.05□□□□□ -1.76
COL20A1Q9P218 CALM2P3-201ENST00000400429 449 ntBASIC4.05□□□□□ -1.76
COL20A1Q9P218 HSPE1P8-201ENST00000406997 288 ntBASIC4.05□□□□□ -1.76
COL20A1Q9P218 BTF3P7-201ENST00000407097 488 ntBASIC4.05□□□□□ -1.76
COL20A1Q9P218 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
COL20A1Q9P218 RPL21P109-201ENST00000422213 475 ntBASIC4.05□□□□□ -1.76
COL20A1Q9P218 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC4.05□□□□□ -1.76
COL20A1Q9P218 MTATP6P4-201ENST00000427725 675 ntBASIC4.05□□□□□ -1.76
COL20A1Q9P218 MED13P1-201ENST00000428342 171 ntBASIC4.05□□□□□ -1.76
COL20A1Q9P218 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC4.05□□□□□ -1.76
COL20A1Q9P218 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC4.05□□□□□ -1.76
COL20A1Q9P218 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC4.05□□□□□ -1.76
COL20A1Q9P218 AC013267.1-201ENST00000458227 267 ntBASIC4.05□□□□□ -1.76
COL20A1Q9P218 AP000926.1-201ENST00000479573 241 ntBASIC4.05□□□□□ -1.76
COL20A1Q9P218 RPL31P13-201ENST00000484151 370 ntBASIC4.05□□□□□ -1.76
COL20A1Q9P218 AC019235.1-201ENST00000503847 207 ntBASIC4.05□□□□□ -1.76
COL20A1Q9P218 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC4.05□□□□□ -1.76
COL20A1Q9P218 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC4.05□□□□□ -1.76
COL20A1Q9P218 RNU6-1073P-201ENST00000517182 106 ntBASIC4.05□□□□□ -1.76
COL20A1Q9P218 ERHP1-201ENST00000523006 310 ntBASIC4.05□□□□□ -1.76
COL20A1Q9P218 OR4R1P-201ENST00000529879 463 ntBASIC4.05□□□□□ -1.76
COL20A1Q9P218 AP004242.1-201ENST00000533701 349 ntBASIC4.05□□□□□ -1.76
COL20A1Q9P218 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC4.05□□□□□ -1.76
COL20A1Q9P218 OR4H12P-201ENST00000556269 907 ntBASIC4.05□□□□□ -1.76
COL20A1Q9P218 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC4.05□□□□□ -1.76
COL20A1Q9P218 HMGB1P33-201ENST00000563485 527 ntBASIC4.05□□□□□ -1.76
COL20A1Q9P218 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC4.05□□□□□ -1.76
COL20A1Q9P218 AC006270.2-201ENST00000578523 652 ntBASIC4.05□□□□□ -1.76
COL20A1Q9P218 AL606834.2-201ENST00000602954 668 ntBASIC4.05□□□□□ -1.76
COL20A1Q9P218 AL391646.1-201ENST00000603860 190 ntBASIC4.05□□□□□ -1.76
COL20A1Q9P218 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC4.05□□□□□ -1.76
COL20A1Q9P218 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC4.05□□□□□ -1.76
COL20A1Q9P218 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
COL20A1Q9P218 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
COL20A1Q9P218 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
COL20A1Q9P218 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
COL20A1Q9P218 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
COL20A1Q9P218 GABPAP-201ENST00000419271 1356 ntBASIC4.04□□□□□ -1.76
COL20A1Q9P218 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
COL20A1Q9P218 AC018555.1-201ENST00000567548 1980 ntBASIC4.04□□□□□ -1.76
COL20A1Q9P218 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
COL20A1Q9P218 SNORA31-201ENST00000362607 130 ntBASIC4.04□□□□□ -1.76
COL20A1Q9P218 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
COL20A1Q9P218 MIR558-201ENST00000384920 94 ntBASIC4.04□□□□□ -1.76
COL20A1Q9P218 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
COL20A1Q9P218 AC110754.1-201ENST00000399740 601 ntBASIC4.04□□□□□ -1.76
COL20A1Q9P218 RN7SKP53-201ENST00000411337 315 ntBASIC4.04□□□□□ -1.76
COL20A1Q9P218 RAC1P3-201ENST00000416129 580 ntBASIC4.04□□□□□ -1.76
COL20A1Q9P218 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC4.04□□□□□ -1.76
COL20A1Q9P218 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.04□□□□□ -1.76
COL20A1Q9P218 RPL21P66-201ENST00000426566 466 ntBASIC4.04□□□□□ -1.76
COL20A1Q9P218 OR2AS1P-201ENST00000427827 319 ntBASIC4.04□□□□□ -1.76
COL20A1Q9P218 AC079780.1-201ENST00000428259 207 ntBASIC4.04□□□□□ -1.76
COL20A1Q9P218 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC4.04□□□□□ -1.76
COL20A1Q9P218 Z99127.3-201ENST00000448158 395 ntBASIC4.04□□□□□ -1.76
COL20A1Q9P218 AC003071.1-201ENST00000451219 789 ntBASIC4.04□□□□□ -1.76
COL20A1Q9P218 MTND2P24-201ENST00000453434 806 ntBASIC4.04□□□□□ -1.76
COL20A1Q9P218 RPL23AP31-201ENST00000456160 467 ntBASIC4.04□□□□□ -1.76
COL20A1Q9P218 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.04□□□□□ -1.76
COL20A1Q9P218 SCARNA24.1-201ENST00000516465 137 ntBASIC4.04□□□□□ -1.76
COL20A1Q9P218 RNU6-1220P-201ENST00000517126 108 ntBASIC4.04□□□□□ -1.76
COL20A1Q9P218 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC4.04□□□□□ -1.76
COL20A1Q9P218 SNRPGP16-201ENST00000533275 226 ntBASIC4.04□□□□□ -1.76
COL20A1Q9P218 MGST1-215ENST00000540056 546 ntTSL 3 BASIC4.04□□□□□ -1.76
COL20A1Q9P218 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC4.04□□□□□ -1.76
COL20A1Q9P218 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC4.04□□□□□ -1.76
COL20A1Q9P218 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC4.04□□□□□ -1.76
COL20A1Q9P218 MIR4801-201ENST00000582704 82 ntBASIC4.04□□□□□ -1.76
COL20A1Q9P218 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC4.04□□□□□ -1.76
COL20A1Q9P218 AL670379.6-201ENST00000603753 252 ntBASIC4.04□□□□□ -1.76
COL20A1Q9P218 AL670379.11-201ENST00000604059 253 ntBASIC4.04□□□□□ -1.76
COL20A1Q9P218 AC008162.1-201ENST00000604718 254 ntBASIC4.04□□□□□ -1.76
COL20A1Q9P218 AL670379.1-201ENST00000604752 252 ntBASIC4.04□□□□□ -1.76
COL20A1Q9P218 Z84480.1-201ENST00000605131 311 ntBASIC4.04□□□□□ -1.76
COL20A1Q9P218 AL670379.5-201ENST00000605253 252 ntBASIC4.04□□□□□ -1.76
COL20A1Q9P218 AL670379.12-201ENST00000605291 253 ntBASIC4.04□□□□□ -1.76
COL20A1Q9P218 AL670379.8-201ENST00000605353 252 ntBASIC4.04□□□□□ -1.76
COL20A1Q9P218 AL670379.7-201ENST00000605823 252 ntBASIC4.04□□□□□ -1.76
COL20A1Q9P218 AC092954.2-201ENST00000609103 430 ntBASIC4.04□□□□□ -1.76
COL20A1Q9P218 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC4.04□□□□□ -1.76
COL20A1Q9P218 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
COL20A1Q9P218 AC103858.2-201ENST00000621471 543 ntBASIC4.04□□□□□ -1.76
COL20A1Q9P218 AC139792.3-201ENST00000623525 224 ntBASIC4.04□□□□□ -1.76
COL20A1Q9P218 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC4.04□□□□□ -1.76
COL20A1Q9P218 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.04□□□□□ -1.76
COL20A1Q9P218 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
COL20A1Q9P218 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.04□□□□□ -1.76
COL20A1Q9P218 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
COL20A1Q9P218 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
COL20A1Q9P218 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.04□□□□□ -1.76
COL20A1Q9P218 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
COL20A1Q9P218 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
COL20A1Q9P218 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
COL20A1Q9P218 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
COL20A1Q9P218 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
COL20A1Q9P218 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
COL20A1Q9P218 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 144.5 ms