Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
NCKIPSDQ9NZQ3 AL391417.1-201ENST00000404100 426 ntBASIC3.71□□□□□ -1.82
NCKIPSDQ9NZQ3 USP9YP6-201ENST00000413550 854 ntBASIC3.71□□□□□ -1.82
NCKIPSDQ9NZQ3 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC3.71□□□□□ -1.82
NCKIPSDQ9NZQ3 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC3.71□□□□□ -1.82
NCKIPSDQ9NZQ3 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC3.71□□□□□ -1.82
NCKIPSDQ9NZQ3 MTCO2P11-201ENST00000431069 680 ntBASIC3.71□□□□□ -1.82
NCKIPSDQ9NZQ3 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC3.71□□□□□ -1.82
NCKIPSDQ9NZQ3 HMGN2P31-201ENST00000432430 273 ntBASIC3.71□□□□□ -1.82
NCKIPSDQ9NZQ3 HSPD1P21-201ENST00000436541 245 ntBASIC3.71□□□□□ -1.82
NCKIPSDQ9NZQ3 AL138799.3-201ENST00000438968 350 ntBASIC3.71□□□□□ -1.82
NCKIPSDQ9NZQ3 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC3.71□□□□□ -1.82
NCKIPSDQ9NZQ3 RPS3AP12-201ENST00000443616 753 ntBASIC3.71□□□□□ -1.82
NCKIPSDQ9NZQ3 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.71□□□□□ -1.82
NCKIPSDQ9NZQ3 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.71□□□□□ -1.82
NCKIPSDQ9NZQ3 RAC1P7-201ENST00000445367 377 ntBASIC3.71□□□□□ -1.82
NCKIPSDQ9NZQ3 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.71□□□□□ -1.82
NCKIPSDQ9NZQ3 AC007967.1-201ENST00000455422 1159 ntBASIC3.71□□□□□ -1.82
NCKIPSDQ9NZQ3 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.71□□□□□ -1.82
NCKIPSDQ9NZQ3 UBDP1-202ENST00000457888 382 ntBASIC3.71□□□□□ -1.82
NCKIPSDQ9NZQ3 AC092989.1-201ENST00000481235 277 ntBASIC3.71□□□□□ -1.82
NCKIPSDQ9NZQ3 AC106707.2-201ENST00000484182 374 ntBASIC3.71□□□□□ -1.82
NCKIPSDQ9NZQ3 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.71□□□□□ -1.82
NCKIPSDQ9NZQ3 FTH1P9-201ENST00000513251 355 ntBASIC3.71□□□□□ -1.82
NCKIPSDQ9NZQ3 SCARNA14-201ENST00000516903 136 ntBASIC3.71□□□□□ -1.82
NCKIPSDQ9NZQ3 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.71□□□□□ -1.82
NCKIPSDQ9NZQ3 AC022695.1-201ENST00000522089 237 ntBASIC3.71□□□□□ -1.82
NCKIPSDQ9NZQ3 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.71□□□□□ -1.82
NCKIPSDQ9NZQ3 AC008489.1-201ENST00000524271 483 ntBASIC3.71□□□□□ -1.82
NCKIPSDQ9NZQ3 AP001893.2-201ENST00000526949 202 ntBASIC3.71□□□□□ -1.82
NCKIPSDQ9NZQ3 AL121576.1-201ENST00000556055 276 ntBASIC3.71□□□□□ -1.82
NCKIPSDQ9NZQ3 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.71□□□□□ -1.82
NCKIPSDQ9NZQ3 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC3.71□□□□□ -1.82
NCKIPSDQ9NZQ3 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.71□□□□□ -1.82
NCKIPSDQ9NZQ3 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC3.71□□□□□ -1.82
NCKIPSDQ9NZQ3 MIR3118-1-201ENST00000581787 76 ntBASIC3.71□□□□□ -1.82
NCKIPSDQ9NZQ3 AP001429.1-201ENST00000602568 530 ntBASIC3.71□□□□□ -1.82
NCKIPSDQ9NZQ3 LARP7P1-201ENST00000605576 316 ntBASIC3.71□□□□□ -1.82
NCKIPSDQ9NZQ3 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.71□□□□□ -1.82
NCKIPSDQ9NZQ3 AC091953.2-201ENST00000623979 160 ntBASIC3.71□□□□□ -1.82
NCKIPSDQ9NZQ3 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.71□□□□□ -1.82
NCKIPSDQ9NZQ3 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.71□□□□□ -1.82
NCKIPSDQ9NZQ3 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
NCKIPSDQ9NZQ3 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
NCKIPSDQ9NZQ3 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
NCKIPSDQ9NZQ3 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.7□□□□□ -1.82
NCKIPSDQ9NZQ3 RIOK3P1-201ENST00000418778 1528 ntBASIC3.7□□□□□ -1.82
NCKIPSDQ9NZQ3 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
NCKIPSDQ9NZQ3 USP8P1-201ENST00000494673 3183 ntBASIC3.7□□□□□ -1.82
NCKIPSDQ9NZQ3 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
NCKIPSDQ9NZQ3 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
NCKIPSDQ9NZQ3 RNU6-1090P-201ENST00000364065 94 ntBASIC3.7□□□□□ -1.82
NCKIPSDQ9NZQ3 RNU6-1103P-201ENST00000384150 107 ntBASIC3.7□□□□□ -1.82
NCKIPSDQ9NZQ3 MIR218-2-201ENST00000385006 110 ntBASIC3.7□□□□□ -1.82
NCKIPSDQ9NZQ3 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
NCKIPSDQ9NZQ3 RNU6-882P-201ENST00000391025 103 ntBASIC3.7□□□□□ -1.82
NCKIPSDQ9NZQ3 RNU6-516P-201ENST00000411381 104 ntBASIC3.7□□□□□ -1.82
NCKIPSDQ9NZQ3 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC3.7□□□□□ -1.82
NCKIPSDQ9NZQ3 SYF2P2-201ENST00000417620 583 ntBASIC3.7□□□□□ -1.82
NCKIPSDQ9NZQ3 PIGFP2-201ENST00000421400 651 ntBASIC3.7□□□□□ -1.82
NCKIPSDQ9NZQ3 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
NCKIPSDQ9NZQ3 MTND4P28-201ENST00000426217 387 ntBASIC3.7□□□□□ -1.82
NCKIPSDQ9NZQ3 ARPC3P1-201ENST00000437218 533 ntBASIC3.7□□□□□ -1.82
NCKIPSDQ9NZQ3 MTCO3P18-201ENST00000440206 761 ntBASIC3.7□□□□□ -1.82
NCKIPSDQ9NZQ3 AL662791.1-201ENST00000441992 928 ntBASIC3.7□□□□□ -1.82
NCKIPSDQ9NZQ3 MTATP6P30-201ENST00000443540 664 ntBASIC3.7□□□□□ -1.82
NCKIPSDQ9NZQ3 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC3.7□□□□□ -1.82
NCKIPSDQ9NZQ3 RPL23AP14-201ENST00000468281 468 ntBASIC3.7□□□□□ -1.82
NCKIPSDQ9NZQ3 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.7□□□□□ -1.82
NCKIPSDQ9NZQ3 AC026784.1-201ENST00000507986 352 ntBASIC3.7□□□□□ -1.82
NCKIPSDQ9NZQ3 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC3.7□□□□□ -1.82
NCKIPSDQ9NZQ3 AC009646.1-201ENST00000510455 318 ntBASIC3.7□□□□□ -1.82
NCKIPSDQ9NZQ3 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.7□□□□□ -1.82
NCKIPSDQ9NZQ3 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.7□□□□□ -1.82
NCKIPSDQ9NZQ3 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.7□□□□□ -1.82
NCKIPSDQ9NZQ3 HMGN1P28-201ENST00000521340 364 ntBASIC3.7□□□□□ -1.82
NCKIPSDQ9NZQ3 AC107934.1-201ENST00000522215 217 ntBASIC3.7□□□□□ -1.82
NCKIPSDQ9NZQ3 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.7□□□□□ -1.82
NCKIPSDQ9NZQ3 OR5D17P-201ENST00000531492 978 ntBASIC3.7□□□□□ -1.82
NCKIPSDQ9NZQ3 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.7□□□□□ -1.82
NCKIPSDQ9NZQ3 AL356432.3-201ENST00000568952 465 ntBASIC3.7□□□□□ -1.82
NCKIPSDQ9NZQ3 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.7□□□□□ -1.82
NCKIPSDQ9NZQ3 NRBF2P1-201ENST00000587407 859 ntBASIC3.7□□□□□ -1.82
NCKIPSDQ9NZQ3 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.7□□□□□ -1.82
NCKIPSDQ9NZQ3 KLKP1-201ENST00000595979 403 ntBASIC3.7□□□□□ -1.82
NCKIPSDQ9NZQ3 AC068790.3-201ENST00000602988 553 ntBASIC3.7□□□□□ -1.82
NCKIPSDQ9NZQ3 AC007179.3-201ENST00000604976 235 ntBASIC3.7□□□□□ -1.82
NCKIPSDQ9NZQ3 BX664608.1-201ENST00000610519 487 ntBASIC3.7□□□□□ -1.82
NCKIPSDQ9NZQ3 AL359314.1-201ENST00000616913 261 ntBASIC3.7□□□□□ -1.82
NCKIPSDQ9NZQ3 AL353748.2-201ENST00000622148 471 ntBASIC3.7□□□□□ -1.82
NCKIPSDQ9NZQ3 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC3.7□□□□□ -1.82
NCKIPSDQ9NZQ3 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC3.7□□□□□ -1.82
NCKIPSDQ9NZQ3 AC010149.2-201ENST00000637608 315 ntBASIC3.7□□□□□ -1.82
NCKIPSDQ9NZQ3 LRRC77P-213ENST00000637727 880 ntBASIC3.7□□□□□ -1.82
NCKIPSDQ9NZQ3 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
NCKIPSDQ9NZQ3 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
NCKIPSDQ9NZQ3 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
NCKIPSDQ9NZQ3 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
NCKIPSDQ9NZQ3 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.7□□□□□ -1.82
NCKIPSDQ9NZQ3 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 125.2 ms