Protein–RNA interactions for Protein: Q9NX63

CHCHD3, MICOS complex subunit MIC19, humanhuman

Known RBP Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3Q9NX63 AC108043.1-201ENST00000512696 574 ntBASIC3.12□□□□□ -1.91
CHCHD3Q9NX63 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.12□□□□□ -1.91
CHCHD3Q9NX63 RN7SKP258-201ENST00000517151 304 ntBASIC3.12□□□□□ -1.91
CHCHD3Q9NX63 SNORA31.21-201ENST00000517180 77 ntBASIC3.12□□□□□ -1.91
CHCHD3Q9NX63 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.12□□□□□ -1.91
CHCHD3Q9NX63 AC123904.3-201ENST00000547218 814 ntBASIC3.12□□□□□ -1.91
CHCHD3Q9NX63 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC3.12□□□□□ -1.91
CHCHD3Q9NX63 MIR5187-201ENST00000583479 76 ntBASIC3.12□□□□□ -1.91
CHCHD3Q9NX63 AC023043.3-201ENST00000593113 385 ntBASIC3.12□□□□□ -1.91
CHCHD3Q9NX63 AP000787.2-201ENST00000604432 568 ntBASIC3.12□□□□□ -1.91
CHCHD3Q9NX63 AL161629.2-201ENST00000615347 275 ntBASIC3.12□□□□□ -1.91
CHCHD3Q9NX63 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.12□□□□□ -1.91
CHCHD3Q9NX63 FRG1KP-201ENST00000623592 341 ntBASIC3.12□□□□□ -1.91
CHCHD3Q9NX63 AC093591.3-201ENST00000634516 308 ntBASIC3.12□□□□□ -1.91
CHCHD3Q9NX63 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CHCHD3Q9NX63 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CHCHD3Q9NX63 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.11□□□□□ -1.91
CHCHD3Q9NX63 SNORD21-201ENST00000383953 95 ntBASIC3.11□□□□□ -1.91
CHCHD3Q9NX63 MIR325-201ENST00000385260 98 ntBASIC3.11□□□□□ -1.91
CHCHD3Q9NX63 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.11□□□□□ -1.91
CHCHD3Q9NX63 RPL7P8-201ENST00000411964 730 ntBASIC3.11□□□□□ -1.91
CHCHD3Q9NX63 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.11□□□□□ -1.91
CHCHD3Q9NX63 RPL32P35-201ENST00000415214 394 ntBASIC3.11□□□□□ -1.91
CHCHD3Q9NX63 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC3.11□□□□□ -1.91
CHCHD3Q9NX63 ZNF90P2-204ENST00000419323 1075 ntBASIC3.11□□□□□ -1.91
CHCHD3Q9NX63 AC244035.1-201ENST00000430042 390 ntBASIC3.11□□□□□ -1.91
CHCHD3Q9NX63 AL117339.2-201ENST00000430475 180 ntBASIC3.11□□□□□ -1.91
CHCHD3Q9NX63 AL365184.2-201ENST00000431139 435 ntBASIC3.11□□□□□ -1.91
CHCHD3Q9NX63 TIMM9P1-201ENST00000436122 256 ntBASIC3.11□□□□□ -1.91
CHCHD3Q9NX63 AL512286.1-201ENST00000439244 400 ntBASIC3.11□□□□□ -1.91
CHCHD3Q9NX63 AC016696.1-201ENST00000446949 318 ntBASIC3.11□□□□□ -1.91
CHCHD3Q9NX63 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.11□□□□□ -1.91
CHCHD3Q9NX63 NUTF2P7-201ENST00000453086 375 ntBASIC3.11□□□□□ -1.91
CHCHD3Q9NX63 SNRPFP4-201ENST00000456366 242 ntBASIC3.11□□□□□ -1.91
CHCHD3Q9NX63 NDUFAF4P3-201ENST00000456468 525 ntBASIC3.11□□□□□ -1.91
CHCHD3Q9NX63 RNU7-23P-201ENST00000459465 62 ntBASIC3.11□□□□□ -1.91
CHCHD3Q9NX63 AC010631.1-201ENST00000474150 156 ntBASIC3.11□□□□□ -1.91
CHCHD3Q9NX63 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CHCHD3Q9NX63 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.11□□□□□ -1.91
CHCHD3Q9NX63 AC116347.2-201ENST00000514912 523 ntBASIC3.11□□□□□ -1.91
CHCHD3Q9NX63 RNA5SP217-201ENST00000515959 91 ntBASIC3.11□□□□□ -1.91
CHCHD3Q9NX63 RNU6-390P-201ENST00000516259 103 ntBASIC3.11□□□□□ -1.91
CHCHD3Q9NX63 SCARNA14-201ENST00000516903 136 ntBASIC3.11□□□□□ -1.91
CHCHD3Q9NX63 RNU6-232P-201ENST00000517144 64 ntBASIC3.11□□□□□ -1.91
CHCHD3Q9NX63 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.11□□□□□ -1.91
CHCHD3Q9NX63 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.11□□□□□ -1.91
CHCHD3Q9NX63 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.11□□□□□ -1.91
CHCHD3Q9NX63 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.11□□□□□ -1.91
CHCHD3Q9NX63 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC3.11□□□□□ -1.91
CHCHD3Q9NX63 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.11□□□□□ -1.91
CHCHD3Q9NX63 AC121334.2-201ENST00000605387 271 ntBASIC3.11□□□□□ -1.91
CHCHD3Q9NX63 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.11□□□□□ -1.91
CHCHD3Q9NX63 AC245517.5-201ENST00000611529 162 ntBASIC3.11□□□□□ -1.91
CHCHD3Q9NX63 AC009159.1-201ENST00000618386 642 ntBASIC3.11□□□□□ -1.91
CHCHD3Q9NX63 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.11□□□□□ -1.91
CHCHD3Q9NX63 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.11□□□□□ -1.91
CHCHD3Q9NX63 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CHCHD3Q9NX63 AC032011.1-201ENST00000611703 1549 ntBASIC3.1□□□□□ -1.91
CHCHD3Q9NX63 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
CHCHD3Q9NX63 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CHCHD3Q9NX63 RNU1-70P-201ENST00000362618 164 ntBASIC3.1□□□□□ -1.91
CHCHD3Q9NX63 RNU1-105P-201ENST00000363470 161 ntBASIC3.1□□□□□ -1.91
CHCHD3Q9NX63 AC078974.1-201ENST00000411597 223 ntBASIC3.1□□□□□ -1.91
CHCHD3Q9NX63 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.1□□□□□ -1.91
CHCHD3Q9NX63 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC3.1□□□□□ -1.91
CHCHD3Q9NX63 AL645937.1-202ENST00000421799 937 ntBASIC3.1□□□□□ -1.91
CHCHD3Q9NX63 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC3.1□□□□□ -1.91
CHCHD3Q9NX63 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC3.1□□□□□ -1.91
CHCHD3Q9NX63 AC091390.3-201ENST00000426478 338 ntBASIC3.1□□□□□ -1.91
CHCHD3Q9NX63 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC3.1□□□□□ -1.91
CHCHD3Q9NX63 MED14P1-201ENST00000430517 648 ntBASIC3.1□□□□□ -1.91
CHCHD3Q9NX63 RPL22P17-201ENST00000438729 315 ntBASIC3.1□□□□□ -1.91
CHCHD3Q9NX63 AC093156.1-201ENST00000440382 670 ntBASIC3.1□□□□□ -1.91
CHCHD3Q9NX63 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC3.1□□□□□ -1.91
CHCHD3Q9NX63 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.1□□□□□ -1.91
CHCHD3Q9NX63 AC009961.3-201ENST00000449832 765 ntBASIC3.1□□□□□ -1.91
CHCHD3Q9NX63 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CHCHD3Q9NX63 BZW1P2-201ENST00000473537 826 ntBASIC3.1□□□□□ -1.91
CHCHD3Q9NX63 AC006499.5-201ENST00000505037 514 ntBASIC3.1□□□□□ -1.91
CHCHD3Q9NX63 RNU1-143P-201ENST00000516296 146 ntBASIC3.1□□□□□ -1.91
CHCHD3Q9NX63 RNU6-64P-201ENST00000517119 105 ntBASIC3.1□□□□□ -1.91
CHCHD3Q9NX63 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.1□□□□□ -1.91
CHCHD3Q9NX63 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.1□□□□□ -1.91
CHCHD3Q9NX63 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CHCHD3Q9NX63 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.1□□□□□ -1.91
CHCHD3Q9NX63 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.1□□□□□ -1.91
CHCHD3Q9NX63 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.1□□□□□ -1.91
CHCHD3Q9NX63 AC026790.2-201ENST00000606282 430 ntBASIC3.1□□□□□ -1.91
CHCHD3Q9NX63 U1.23-201ENST00000610293 146 ntBASIC3.1□□□□□ -1.91
CHCHD3Q9NX63 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC3.1□□□□□ -1.91
CHCHD3Q9NX63 RNU1-68P-201ENST00000615382 146 ntBASIC3.1□□□□□ -1.91
CHCHD3Q9NX63 uc_338.12-201ENST00000616344 181 ntBASIC3.1□□□□□ -1.91
CHCHD3Q9NX63 AL603755.1-201ENST00000619504 163 ntBASIC3.1□□□□□ -1.91
CHCHD3Q9NX63 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CHCHD3Q9NX63 U1.39-201ENST00000621562 146 ntBASIC3.1□□□□□ -1.91
CHCHD3Q9NX63 FP236240.3-201ENST00000623061 327 ntBASIC3.1□□□□□ -1.91
CHCHD3Q9NX63 AC068880.5-201ENST00000624331 290 ntBASIC3.1□□□□□ -1.91
CHCHD3Q9NX63 FO624990.1-201ENST00000636373 85 ntBASIC3.1□□□□□ -1.91
CHCHD3Q9NX63 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CHCHD3Q9NX63 AL359693.1-201ENST00000614959 2407 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 129.3 ms