Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 RNU6-276P-201ENST00000516114 96 ntBASIC2.27□□□□□ -2.05
CLN6Q9NWW5 SNORA31.11-201ENST00000516528 139 ntBASIC2.27□□□□□ -2.05
CLN6Q9NWW5 RNA5SP471-201ENST00000516971 106 ntBASIC2.27□□□□□ -2.05
CLN6Q9NWW5 HMGN1P28-201ENST00000521340 364 ntBASIC2.27□□□□□ -2.05
CLN6Q9NWW5 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC2.27□□□□□ -2.05
CLN6Q9NWW5 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.27□□□□□ -2.05
CLN6Q9NWW5 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.27□□□□□ -2.05
CLN6Q9NWW5 AC002545.1-201ENST00000592511 181 ntBASIC2.27□□□□□ -2.05
CLN6Q9NWW5 AL606834.3-201ENST00000602615 496 ntBASIC2.27□□□□□ -2.05
CLN6Q9NWW5 AC021749.1-201ENST00000604322 607 ntBASIC2.27□□□□□ -2.05
CLN6Q9NWW5 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
CLN6Q9NWW5 AL138713.1-201ENST00000624026 2130 ntBASIC2.26□□□□□ -2.05
CLN6Q9NWW5 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
CLN6Q9NWW5 SNORD62.1-201ENST00000362541 86 ntBASIC2.26□□□□□ -2.05
CLN6Q9NWW5 RNU6-461P-201ENST00000364195 107 ntBASIC2.26□□□□□ -2.05
CLN6Q9NWW5 SNORA41-201ENST00000384675 132 ntBASIC2.26□□□□□ -2.05
CLN6Q9NWW5 RNU6-114P-201ENST00000384704 105 ntBASIC2.26□□□□□ -2.05
CLN6Q9NWW5 U3.20-201ENST00000390909 217 ntBASIC2.26□□□□□ -2.05
CLN6Q9NWW5 AL109755.1-201ENST00000401791 649 ntBASIC2.26□□□□□ -2.05
CLN6Q9NWW5 AL356421.1-201ENST00000403255 413 ntBASIC2.26□□□□□ -2.05
CLN6Q9NWW5 RNU2-33P-201ENST00000410344 192 ntBASIC2.26□□□□□ -2.05
CLN6Q9NWW5 RNU6-516P-201ENST00000411381 104 ntBASIC2.26□□□□□ -2.05
CLN6Q9NWW5 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.26□□□□□ -2.05
CLN6Q9NWW5 CYCSP32-201ENST00000440548 321 ntBASIC2.26□□□□□ -2.05
CLN6Q9NWW5 RPS24P13-201ENST00000442520 397 ntBASIC2.26□□□□□ -2.05
CLN6Q9NWW5 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC2.26□□□□□ -2.05
CLN6Q9NWW5 MTND1P9-201ENST00000453775 944 ntBASIC2.26□□□□□ -2.05
CLN6Q9NWW5 ATG12P2-201ENST00000456830 416 ntBASIC2.26□□□□□ -2.05
CLN6Q9NWW5 AC104563.1-201ENST00000476147 376 ntBASIC2.26□□□□□ -2.05
CLN6Q9NWW5 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.26□□□□□ -2.05
CLN6Q9NWW5 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC2.26□□□□□ -2.05
CLN6Q9NWW5 AC022634.1-201ENST00000520765 532 ntBASIC2.26□□□□□ -2.05
CLN6Q9NWW5 DEFB131D-201ENST00000526803 184 ntBASIC2.26□□□□□ -2.05
CLN6Q9NWW5 COX6CP5-201ENST00000527162 228 ntBASIC2.26□□□□□ -2.05
CLN6Q9NWW5 AP003497.1-201ENST00000528472 562 ntBASIC2.26□□□□□ -2.05
CLN6Q9NWW5 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.26□□□□□ -2.05
CLN6Q9NWW5 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC2.26□□□□□ -2.05
CLN6Q9NWW5 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.26□□□□□ -2.05
CLN6Q9NWW5 AC079600.2-201ENST00000550076 130 ntBASIC2.26□□□□□ -2.05
CLN6Q9NWW5 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.26□□□□□ -2.05
CLN6Q9NWW5 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.26□□□□□ -2.05
CLN6Q9NWW5 AC025281.1-201ENST00000567026 265 ntBASIC2.26□□□□□ -2.05
CLN6Q9NWW5 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.26□□□□□ -2.05
CLN6Q9NWW5 MIR4446-201ENST00000578505 67 ntBASIC2.26□□□□□ -2.05
CLN6Q9NWW5 HMGN2P15-201ENST00000585707 270 ntBASIC2.26□□□□□ -2.05
CLN6Q9NWW5 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC2.26□□□□□ -2.05
CLN6Q9NWW5 RPL12P50-201ENST00000603116 116 ntBASIC2.26□□□□□ -2.05
CLN6Q9NWW5 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.26□□□□□ -2.05
CLN6Q9NWW5 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.26□□□□□ -2.05
CLN6Q9NWW5 AC009268.2-201ENST00000621925 457 ntBASIC2.26□□□□□ -2.05
CLN6Q9NWW5 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
CLN6Q9NWW5 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
CLN6Q9NWW5 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.26□□□□□ -2.05
CLN6Q9NWW5 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.25□□□□□ -2.05
CLN6Q9NWW5 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
CLN6Q9NWW5 RNA5SP456-201ENST00000364002 114 ntBASIC2.25□□□□□ -2.05
CLN6Q9NWW5 RNU1-51P-201ENST00000365345 176 ntBASIC2.25□□□□□ -2.05
CLN6Q9NWW5 SNORA44-201ENST00000384584 132 ntBASIC2.25□□□□□ -2.05
CLN6Q9NWW5 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.25□□□□□ -2.05
CLN6Q9NWW5 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC2.25□□□□□ -2.05
CLN6Q9NWW5 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.25□□□□□ -2.05
CLN6Q9NWW5 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.25□□□□□ -2.05
CLN6Q9NWW5 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC2.25□□□□□ -2.05
CLN6Q9NWW5 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC2.25□□□□□ -2.05
CLN6Q9NWW5 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.25□□□□□ -2.05
CLN6Q9NWW5 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC2.25□□□□□ -2.05
CLN6Q9NWW5 DPPA3P1-201ENST00000448050 469 ntBASIC2.25□□□□□ -2.05
CLN6Q9NWW5 NANOGNBP1-201ENST00000448444 480 ntBASIC2.25□□□□□ -2.05
CLN6Q9NWW5 MTND1P31-201ENST00000449206 961 ntBASIC2.25□□□□□ -2.05
CLN6Q9NWW5 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
CLN6Q9NWW5 MTND1P16-201ENST00000465177 898 ntBASIC2.25□□□□□ -2.05
CLN6Q9NWW5 RPS20P22-201ENST00000473700 357 ntBASIC2.25□□□□□ -2.05
CLN6Q9NWW5 AC022447.3-201ENST00000506865 495 ntBASIC2.25□□□□□ -2.05
CLN6Q9NWW5 AC112673.1-201ENST00000513168 575 ntBASIC2.25□□□□□ -2.05
CLN6Q9NWW5 SNORA19.3-201ENST00000516165 130 ntBASIC2.25□□□□□ -2.05
CLN6Q9NWW5 AC010376.1-201ENST00000522101 334 ntBASIC2.25□□□□□ -2.05
CLN6Q9NWW5 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
CLN6Q9NWW5 AC118942.1-201ENST00000529674 1035 ntBASIC2.25□□□□□ -2.05
CLN6Q9NWW5 OR4R1P-201ENST00000529879 463 ntBASIC2.25□□□□□ -2.05
CLN6Q9NWW5 AC243972.3-201ENST00000539655 198 ntBASIC2.25□□□□□ -2.05
CLN6Q9NWW5 CYCSP2-201ENST00000558168 301 ntBASIC2.25□□□□□ -2.05
CLN6Q9NWW5 BNIP3P26-201ENST00000600827 554 ntBASIC2.25□□□□□ -2.05
CLN6Q9NWW5 AL138478.1-201ENST00000612252 832 ntBASIC2.25□□□□□ -2.05
CLN6Q9NWW5 PART1_2.1-201ENST00000612397 250 ntBASIC2.25□□□□□ -2.05
CLN6Q9NWW5 AC008498.1-201ENST00000613012 531 ntBASIC2.25□□□□□ -2.05
CLN6Q9NWW5 AC019226.1-201ENST00000625666 515 ntBASIC2.25□□□□□ -2.05
CLN6Q9NWW5 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.24□□□□□ -2.05
CLN6Q9NWW5 RPL21P132-201ENST00000331267 462 ntBASIC2.24□□□□□ -2.05
CLN6Q9NWW5 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
CLN6Q9NWW5 SNORD116-12-201ENST00000384468 92 ntBASIC2.24□□□□□ -2.05
CLN6Q9NWW5 RNU6-140P-201ENST00000384566 108 ntBASIC2.24□□□□□ -2.05
CLN6Q9NWW5 RNU6-1000P-201ENST00000391066 106 ntBASIC2.24□□□□□ -2.05
CLN6Q9NWW5 ANAPC10P1-201ENST00000395991 556 ntBASIC2.24□□□□□ -2.05
CLN6Q9NWW5 RPL23AP29-201ENST00000397284 453 ntBASIC2.24□□□□□ -2.05
CLN6Q9NWW5 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
CLN6Q9NWW5 RN7SKP140-201ENST00000411196 284 ntBASIC2.24□□□□□ -2.05
CLN6Q9NWW5 AF274854.1-201ENST00000413236 615 ntBASIC2.24□□□□□ -2.05
CLN6Q9NWW5 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC2.24□□□□□ -2.05
CLN6Q9NWW5 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.24□□□□□ -2.05
CLN6Q9NWW5 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms