Protein–RNA interactions for Protein: Q9NTJ3

SMC4, Structural maintenance of chromosomes protein 4, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4Q9NTJ3 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC3.83□□□□□ -1.8
SMC4Q9NTJ3 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.83□□□□□ -1.8
SMC4Q9NTJ3 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.83□□□□□ -1.8
SMC4Q9NTJ3 RPL7P36-201ENST00000444633 681 ntBASIC3.83□□□□□ -1.8
SMC4Q9NTJ3 TPT1P14-201ENST00000448018 505 ntBASIC3.83□□□□□ -1.8
SMC4Q9NTJ3 AL590664.1-201ENST00000448065 339 ntBASIC3.83□□□□□ -1.8
SMC4Q9NTJ3 AL162389.1-201ENST00000449233 177 ntBASIC3.83□□□□□ -1.8
SMC4Q9NTJ3 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.83□□□□□ -1.8
SMC4Q9NTJ3 AC006483.1-201ENST00000487308 313 ntBASIC3.83□□□□□ -1.8
SMC4Q9NTJ3 RPL30P5-201ENST00000494923 336 ntBASIC3.83□□□□□ -1.8
SMC4Q9NTJ3 RNA5SP385-201ENST00000515947 110 ntBASIC3.83□□□□□ -1.8
SMC4Q9NTJ3 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.83□□□□□ -1.8
SMC4Q9NTJ3 AC087373.1-201ENST00000524920 491 ntBASIC3.83□□□□□ -1.8
SMC4Q9NTJ3 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.83□□□□□ -1.8
SMC4Q9NTJ3 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC3.83□□□□□ -1.8
SMC4Q9NTJ3 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.83□□□□□ -1.8
SMC4Q9NTJ3 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.83□□□□□ -1.8
SMC4Q9NTJ3 AC109446.2-201ENST00000567872 497 ntBASIC3.83□□□□□ -1.8
SMC4Q9NTJ3 RPL23AP84-201ENST00000571193 464 ntBASIC3.83□□□□□ -1.8
SMC4Q9NTJ3 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.83□□□□□ -1.8
SMC4Q9NTJ3 MIR3200-201ENST00000580767 85 ntBASIC3.83□□□□□ -1.8
SMC4Q9NTJ3 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.83□□□□□ -1.8
SMC4Q9NTJ3 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC3.83□□□□□ -1.8
SMC4Q9NTJ3 AL138880.2-201ENST00000616214 239 ntBASIC3.83□□□□□ -1.8
SMC4Q9NTJ3 CU459211.1-201ENST00000635667 749 ntBASIC3.83□□□□□ -1.8
SMC4Q9NTJ3 MTND4P16-201ENST00000466108 1367 ntBASIC3.83□□□□□ -1.8
SMC4Q9NTJ3 MTND5P7-201ENST00000413558 1798 ntBASIC3.83□□□□□ -1.8
SMC4Q9NTJ3 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC3.83□□□□□ -1.8
SMC4Q9NTJ3 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
SMC4Q9NTJ3 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SMC4Q9NTJ3 MIR422A-201ENST00000362286 90 ntBASIC3.82□□□□□ -1.8
SMC4Q9NTJ3 MIR514A1-201ENST00000385133 98 ntBASIC3.82□□□□□ -1.8
SMC4Q9NTJ3 RNU6-1197P-201ENST00000391183 107 ntBASIC3.82□□□□□ -1.8
SMC4Q9NTJ3 AL049545.1-201ENST00000401856 572 ntBASIC3.82□□□□□ -1.8
SMC4Q9NTJ3 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC3.82□□□□□ -1.8
SMC4Q9NTJ3 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC3.82□□□□□ -1.8
SMC4Q9NTJ3 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC3.82□□□□□ -1.8
SMC4Q9NTJ3 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.82□□□□□ -1.8
SMC4Q9NTJ3 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.82□□□□□ -1.8
SMC4Q9NTJ3 RPL37P4-201ENST00000448908 268 ntBASIC3.82□□□□□ -1.8
SMC4Q9NTJ3 ZNF736P5Y-201ENST00000451173 805 ntBASIC3.82□□□□□ -1.8
SMC4Q9NTJ3 RPL31P60-201ENST00000478450 367 ntBASIC3.82□□□□□ -1.8
SMC4Q9NTJ3 AC068724.1-201ENST00000487100 792 ntBASIC3.82□□□□□ -1.8
SMC4Q9NTJ3 RN7SL283P-201ENST00000489055 303 ntBASIC3.82□□□□□ -1.8
SMC4Q9NTJ3 AC135721.1-201ENST00000497954 479 ntBASIC3.82□□□□□ -1.8
SMC4Q9NTJ3 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC3.82□□□□□ -1.8
SMC4Q9NTJ3 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC3.82□□□□□ -1.8
SMC4Q9NTJ3 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.82□□□□□ -1.8
SMC4Q9NTJ3 MTND2P38-201ENST00000522536 667 ntBASIC3.82□□□□□ -1.8
SMC4Q9NTJ3 AP000889.1-201ENST00000530968 660 ntBASIC3.82□□□□□ -1.8
SMC4Q9NTJ3 AC007834.2-201ENST00000536310 343 ntBASIC3.82□□□□□ -1.8
SMC4Q9NTJ3 EMP1-206ENST00000537612 505 ntTSL 3 BASIC3.82□□□□□ -1.8
SMC4Q9NTJ3 OSBPL9P5-201ENST00000542581 171 ntBASIC3.82□□□□□ -1.8
SMC4Q9NTJ3 AL163153.1-201ENST00000554223 283 ntBASIC3.82□□□□□ -1.8
SMC4Q9NTJ3 AC090888.1-201ENST00000561335 1141 ntBASIC3.82□□□□□ -1.8
SMC4Q9NTJ3 MIR4307-201ENST00000582802 84 ntBASIC3.82□□□□□ -1.8
SMC4Q9NTJ3 AC090616.2-202ENST00000584248 222 ntBASIC3.82□□□□□ -1.8
SMC4Q9NTJ3 AC103710.4-201ENST00000609301 899 ntBASIC3.82□□□□□ -1.8
SMC4Q9NTJ3 AC090132.2-201ENST00000615881 347 ntBASIC3.82□□□□□ -1.8
SMC4Q9NTJ3 ATP5A1P2-202ENST00000616464 443 ntBASIC3.82□□□□□ -1.8
SMC4Q9NTJ3 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3.82□□□□□ -1.8
SMC4Q9NTJ3 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.82□□□□□ -1.8
SMC4Q9NTJ3 AC079248.2-201ENST00000623779 326 ntBASIC3.82□□□□□ -1.8
SMC4Q9NTJ3 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.82□□□□□ -1.8
SMC4Q9NTJ3 AC006927.3-201ENST00000638789 384 ntBASIC3.82□□□□□ -1.8
SMC4Q9NTJ3 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SMC4Q9NTJ3 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SMC4Q9NTJ3 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.82□□□□□ -1.8
SMC4Q9NTJ3 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.81□□□□□ -1.8
SMC4Q9NTJ3 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.81□□□□□ -1.8
SMC4Q9NTJ3 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
SMC4Q9NTJ3 SNORA23-201ENST00000365128 182 ntBASIC3.81□□□□□ -1.8
SMC4Q9NTJ3 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.81□□□□□ -1.8
SMC4Q9NTJ3 MTND2P18-201ENST00000419962 1030 ntBASIC3.81□□□□□ -1.8
SMC4Q9NTJ3 RPS27AP14-201ENST00000422868 454 ntBASIC3.81□□□□□ -1.8
SMC4Q9NTJ3 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.81□□□□□ -1.8
SMC4Q9NTJ3 AL590383.1-201ENST00000428602 75 ntBASIC3.81□□□□□ -1.8
SMC4Q9NTJ3 AC109583.1-201ENST00000432156 268 ntBASIC3.81□□□□□ -1.8
SMC4Q9NTJ3 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC3.81□□□□□ -1.8
SMC4Q9NTJ3 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.81□□□□□ -1.8
SMC4Q9NTJ3 RPL30P6-201ENST00000475925 342 ntBASIC3.81□□□□□ -1.8
SMC4Q9NTJ3 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC3.81□□□□□ -1.8
SMC4Q9NTJ3 MTND4LP22-201ENST00000508209 276 ntBASIC3.81□□□□□ -1.8
SMC4Q9NTJ3 RNA5SP341-201ENST00000516261 117 ntBASIC3.81□□□□□ -1.8
SMC4Q9NTJ3 SCARNA13-201ENST00000516672 275 ntBASIC3.81□□□□□ -1.8
SMC4Q9NTJ3 RNU6-798P-201ENST00000516912 103 ntBASIC3.81□□□□□ -1.8
SMC4Q9NTJ3 RNU6-232P-201ENST00000517144 64 ntBASIC3.81□□□□□ -1.8
SMC4Q9NTJ3 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
SMC4Q9NTJ3 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SMC4Q9NTJ3 AL133271.1-201ENST00000538229 291 ntBASIC3.81□□□□□ -1.8
SMC4Q9NTJ3 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC3.81□□□□□ -1.8
SMC4Q9NTJ3 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.81□□□□□ -1.8
SMC4Q9NTJ3 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC3.81□□□□□ -1.8
SMC4Q9NTJ3 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.81□□□□□ -1.8
SMC4Q9NTJ3 AC012435.1-202ENST00000568772 240 ntBASIC3.81□□□□□ -1.8
SMC4Q9NTJ3 AC005951.1-201ENST00000576706 485 ntBASIC3.81□□□□□ -1.8
SMC4Q9NTJ3 MIR4506-201ENST00000584693 77 ntBASIC3.81□□□□□ -1.8
SMC4Q9NTJ3 AP000403.1-201ENST00000603349 851 ntBASIC3.81□□□□□ -1.8
SMC4Q9NTJ3 AC091965.4-201ENST00000607691 587 ntBASIC3.81□□□□□ -1.8
SMC4Q9NTJ3 AC107214.2-201ENST00000608204 634 ntBASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms